RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 GLI2P10070 1586 aa12.22□□□□□ -0.45
CCDC60-203ENST00000536742 C3orf80F5H4A9 247 aa12.22□□□□□ -0.45
CCDC60-203ENST00000536742 TEX14Q8IWB6 1497 aa12.21□□□□□ -0.45
CCDC60-203ENST00000536742 RNF40O75150 1001 aa12.21□□□□□ -0.45
CCDC60-203ENST00000536742 IFFO2Q5TF58 517 aa12.21□□□□□ -0.45
CCDC60-203ENST00000536742 RBM46Q8TBY0 533 aaKnown RBP12.21□□□□□ -0.45
CCDC60-203ENST00000536742 ADGRG1Q9Y653 693 aa12.21□□□□□ -0.45
CCDC60-203ENST00000536742 SLC4A3P48751 1232 aa12.2□□□□□ -0.46
CCDC60-203ENST00000536742 PDE4DQ08499 809 aa12.19□□□□□ -0.46
CCDC60-203ENST00000536742 BRPF1P55201 1214 aaPredicted RBP12.18□□□□□ -0.46
CCDC60-203ENST00000536742 CCDC88BA6NC98 1476 aa12.18□□□□□ -0.46
CCDC60-203ENST00000536742 NEUROD2Q15784 382 aa12.17□□□□□ -0.46
CCDC60-203ENST00000536742 METTL3Q86U44 580 aaKnown RBP12.17□□□□□ -0.46
CCDC60-203ENST00000536742 PXYLP1Q8TE99 480 aa12.17□□□□□ -0.46
CCDC60-203ENST00000536742 ITGBL1O95965 494 aaPredicted RBP12.16□□□□□ -0.46
CCDC60-203ENST00000536742 NECTIN2Q92692 538 aa12.16□□□□□ -0.46
CCDC60-203ENST00000536742 PLB1Q6P1J6 1458 aa12.15□□□□□ -0.46
CCDC60-203ENST00000536742 CLCN1P35523 988 aa12.15□□□□□ -0.46
CCDC60-203ENST00000536742 KCNC4Q03721 635 aa12.15□□□□□ -0.46
CCDC60-203ENST00000536742 EYA1Q99502 592 aa12.15□□□□□ -0.46
CCDC60-203ENST00000536742 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.14□□□□□ -0.47
CCDC60-203ENST00000536742 SWT1Q5T5J6 900 aaKnown RBP12.14□□□□□ -0.47
CCDC60-203ENST00000536742 SLF2Q8IX21 1173 aa12.14□□□□□ -0.47
CCDC60-203ENST00000536742 ABCA5Q8WWZ7 1642 aa12.12□□□□□ -0.47
CCDC60-203ENST00000536742 HSPA2P54652 639 aa12.12□□□□□ -0.47
CCDC60-203ENST00000536742 ADAMTSL3P82987 1691 aa12.11□□□□□ -0.47
CCDC60-203ENST00000536742 ADAMTS12P58397 1594 aa12.11□□□□□ -0.47
CCDC60-203ENST00000536742 A0A0G2JS52 829 aa12.11□□□□□ -0.47
CCDC60-203ENST00000536742 GPCPD1Q9NPB8 672 aa12.11□□□□□ -0.47
CCDC60-203ENST00000536742 KIF21BO75037 1637 aa12.11□□□□□ -0.47
CCDC60-203ENST00000536742 ASXL2Q76L83 1435 aa12.11□□□□□ -0.47
CCDC60-203ENST00000536742 DNAJB2P25686 324 aa12.1□□□□□ -0.47
CCDC60-203ENST00000536742 TTLL12Q14166 644 aaPredicted RBP12.1□□□□□ -0.47
CCDC60-203ENST00000536742 MAP3K4Q9Y6R4 1608 aa12.09□□□□□ -0.47
CCDC60-203ENST00000536742 PARP9Q8IXQ6 854 aa12.09□□□□□ -0.47
CCDC60-203ENST00000536742 KDM4CQ9H3R0 1056 aa12.09□□□□□ -0.47
CCDC60-203ENST00000536742 FHAD1B1AJZ9 1412 aa12.09□□□□□ -0.47
CCDC60-203ENST00000536742 KIAA0586Q9BVV6 1533 aa12.08□□□□□ -0.48
CCDC60-203ENST00000536742 TMUB1Q9BVT8 246 aa12.08□□□□□ -0.48
CCDC60-203ENST00000536742 ABCA10Q8WWZ4 1543 aa12.07□□□□□ -0.48
CCDC60-203ENST00000536742 RGS20O76081 388 aa12.07□□□□□ -0.48
CCDC60-203ENST00000536742 TMEM132AQ24JP5 1023 aa12.07□□□□□ -0.48
CCDC60-203ENST00000536742 FAM161AQ3B820 660 aa12.07□□□□□ -0.48
CCDC60-203ENST00000536742 RCCD1A6NED2 376 aa12.06□□□□□ -0.48
CCDC60-203ENST00000536742 PHOX2BQ99453 314 aa12.06□□□□□ -0.48
CCDC60-203ENST00000536742 MDM2Q00987 491 aaPredicted RBP12.04□□□□□ -0.48
CCDC60-203ENST00000536742 GIGYF2Q6Y7W6 1299 aaKnown RBP12.04□□□□□ -0.48
CCDC60-203ENST00000536742 DDRGK1Q96HY6 314 aa12.04□□□□□ -0.48
CCDC60-203ENST00000536742 PRR14Q9BWN1 585 aa12.04□□□□□ -0.48
CCDC60-203ENST00000536742 TMEM134Q9H6X4 195 aa12.04□□□□□ -0.48
CCDC60-203ENST00000536742 ABCC2Q92887 1545 aa12.04□□□□□ -0.48
CCDC60-203ENST00000536742 CUX1P39880 1505 aa12.03□□□□□ -0.48
CCDC60-203ENST00000536742 APLP1P51693 650 aa12.03□□□□□ -0.48
CCDC60-203ENST00000536742 TJAP1Q5JTD0 557 aa12.03□□□□□ -0.48
CCDC60-203ENST00000536742 MTRQ99707 1265 aa12.03□□□□□ -0.48
CCDC60-203ENST00000536742 IL21Q9HBE4 155 aa12.03□□□□□ -0.48
CCDC60-203ENST00000536742 GPBP1L1Q9HC44 474 aaPredicted RBP12.03□□□□□ -0.48
CCDC60-203ENST00000536742 IQSEC2Q5JU85 1478 aa12.02□□□□□ -0.48
CCDC60-203ENST00000536742 EPRSP07814 1512 aaKnown RBP12.02□□□□□ -0.48
CCDC60-203ENST00000536742 SULF1Q8IWU6 871 aa12.02□□□□□ -0.49
CCDC60-203ENST00000536742 FAM217BQ9NTX9 383 aaPredicted RBP12□□□□□ -0.49
CCDC60-203ENST00000536742 RSPH4AQ5TD94 716 aa11.99□□□□□ -0.49
CCDC60-203ENST00000536742 REPIN1Q9BWE0 567 aaKnown RBP11.98□□□□□ -0.49
CCDC60-203ENST00000536742 MADDQ8WXG6 1647 aa11.97□□□□□ -0.49
CCDC60-203ENST00000536742 SSTR3P32745 418 aaPredicted RBP11.97□□□□□ -0.49
CCDC60-203ENST00000536742 BCORL1Q5H9F3 1711 aa11.97□□□□□ -0.49
CCDC60-203ENST00000536742 MED1Q15648 1581 aaPredicted RBP11.96□□□□□ -0.49
CCDC60-203ENST00000536742 RUSC2Q8N2Y8 1516 aa11.96□□□□□ -0.49
CCDC60-203ENST00000536742 PTPRGP23470 1445 aa11.96□□□□□ -0.49
CCDC60-203ENST00000536742 YEATS2Q9ULM3 1422 aa11.96□□□□□ -0.49
CCDC60-203ENST00000536742 COPS2P61201 443 aa11.96□□□□□ -0.49
CCDC60-203ENST00000536742 KMT5BQ4FZB7 885 aa11.95□□□□□ -0.5
CCDC60-203ENST00000536742 PCDHB3Q9Y5E6 796 aa11.95□□□□□ -0.5
CCDC60-203ENST00000536742 CUL7Q14999 1698 aa11.94□□□□□ -0.5
CCDC60-203ENST00000536742 DIXDC1Q155Q3 683 aa11.94□□□□□ -0.5
CCDC60-203ENST00000536742 ZNF516Q92618 1163 aa11.94□□□□□ -0.5
CCDC60-203ENST00000536742 MS4A1P11836 297 aa11.93□□□□□ -0.5
CCDC60-203ENST00000536742 MAGI3Q5TCQ9 1506 aa11.92□□□□□ -0.5
CCDC60-203ENST00000536742 CFHP08603 1231 aa11.92□□□□□ -0.5
CCDC60-203ENST00000536742 NLRP7Q8WX94 980 aa11.92□□□□□ -0.5
CCDC60-203ENST00000536742 FAM117AQ9C073 453 aa11.92□□□□□ -0.5
CCDC60-203ENST00000536742 GOPCQ9HD26 462 aa11.92□□□□□ -0.5
CCDC60-203ENST00000536742 ERICH3Q5RHP9 1530 aa11.91□□□□□ -0.5
CCDC60-203ENST00000536742 ARID4BQ4LE39 1312 aaPredicted RBP11.91□□□□□ -0.5
CCDC60-203ENST00000536742 RSPH6AQ9H0K4 717 aa11.91□□□□□ -0.5
CCDC60-203ENST00000536742 RIMS1Q86UR5 1692 aaKnown RBP11.91□□□□□ -0.5
CCDC60-203ENST00000536742 UHRF1BP1LA0JNW5 1464 aa11.9□□□□□ -0.5
CCDC60-203ENST00000536742 CD46P15529 392 aa11.9□□□□□ -0.5
CCDC60-203ENST00000536742 GGCXP38435 758 aa11.89□□□□□ -0.51
CCDC60-203ENST00000536742 IL27Q8NEV9 243 aa11.89□□□□□ -0.51
CCDC60-203ENST00000536742 BEGAINQ9BUH8 593 aa11.89□□□□□ -0.51
CCDC60-203ENST00000536742 DDX11L8A8MPP1 907 aa11.88□□□□□ -0.51
CCDC60-203ENST00000536742 ACTN4O43707 911 aaKnown RBP11.88□□□□□ -0.51
CCDC60-203ENST00000536742 ZPR1O75312 459 aa11.88□□□□□ -0.51
CCDC60-203ENST00000536742 IRX2Q9BZI1 471 aaPredicted RBP11.88□□□□□ -0.51
CCDC60-203ENST00000536742 CD109Q6YHK3 1445 aa11.87□□□□□ -0.51
CCDC60-203ENST00000536742 ARAP3Q8WWN8 1544 aa11.87□□□□□ -0.51
CCDC60-203ENST00000536742 PLEKHG3A1L390 1219 aa11.87□□□□□ -0.51
CCDC60-203ENST00000536742 UBAP1LF5GYI3 381 aa11.87□□□□□ -0.51
CCDC60-203ENST00000536742 SLC10A3P09131 477 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms