RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 CADPS2Q86UW7 1296 aa25.7■■□□□ 1.7
DDX55-204ENST00000536079 DLC1Q96QB1 1528 aa25.69■■□□□ 1.7
DDX55-204ENST00000536079 HSPA1LP34931 641 aa25.68■■□□□ 1.7
DDX55-204ENST00000536079 DCCP43146 1447 aa25.68■■□□□ 1.7
DDX55-204ENST00000536079 MST1RQ04912 1400 aa25.67■■□□□ 1.7
DDX55-204ENST00000536079 TRPM1Q7Z4N2 1603 aa25.66■■□□□ 1.7
DDX55-204ENST00000536079 POGKQ9P215 609 aa25.65■■□□□ 1.7
DDX55-204ENST00000536079 ROBO1Q9Y6N7 1651 aa25.62■■□□□ 1.69
DDX55-204ENST00000536079 ARHGEF28Q8N1W1 1705 aaKnown RBP25.6■■□□□ 1.69
DDX55-204ENST00000536079 ROCK2O75116 1388 aaKnown RBP25.6■■□□□ 1.69
DDX55-204ENST00000536079 BRINP3Q76B58 766 aa25.6■■□□□ 1.69
DDX55-204ENST00000536079 HIRIP3Q9BW71 556 aaPredicted RBP25.6■■□□□ 1.69
DDX55-204ENST00000536079 MINK1Q8N4C8 1332 aaPredicted RBP25.6■■□□□ 1.69
DDX55-204ENST00000536079 C1orf167Q5SNV9 1468 aa25.6■■□□□ 1.69
DDX55-204ENST00000536079 NUTM2FA1L443 756 aa25.59■■□□□ 1.69
DDX55-204ENST00000536079 CDC42BPGQ6DT37 1551 aa25.59■■□□□ 1.69
DDX55-204ENST00000536079 ORAI2Q96SN7 254 aa25.57■■□□□ 1.68
DDX55-204ENST00000536079 GPRASP1Q5JY77 1395 aa25.56■■□□□ 1.68
DDX55-204ENST00000536079 RALGAPBQ86X10 1494 aa25.55■■□□□ 1.68
DDX55-204ENST00000536079 DDX17Q92841 729 aaKnown RBP25.55■■□□□ 1.68
DDX55-204ENST00000536079 TIMELESSQ9UNS1 1208 aa25.53■■□□□ 1.68
DDX55-204ENST00000536079 CARD11Q9BXL7 1154 aa25.51■■□□□ 1.67
DDX55-204ENST00000536079 ADGRB2O60241 1585 aa25.51■■□□□ 1.67
DDX55-204ENST00000536079 FMN2Q9NZ56 1722 aa25.51■■□□□ 1.67
DDX55-204ENST00000536079 CENPJQ9HC77 1338 aaPredicted RBP25.49■■□□□ 1.67
DDX55-204ENST00000536079 PRR36Q9H6K5 1346 aa25.48■■□□□ 1.67
DDX55-204ENST00000536079 WASLO00401 505 aaPredicted RBP25.48■■□□□ 1.67
DDX55-204ENST00000536079 ESCO1Q5FWF5 840 aa25.48■■□□□ 1.67
DDX55-204ENST00000536079 AHDC1Q5TGY3 1603 aaPredicted RBP25.45■■□□□ 1.67
DDX55-204ENST00000536079 USP32Q8NFA0 1604 aa25.45■■□□□ 1.67
DDX55-204ENST00000536079 PHLPP1O60346 1717 aa25.44■■□□□ 1.66
DDX55-204ENST00000536079 CDK19Q9BWU1 502 aa25.44■■□□□ 1.66
DDX55-204ENST00000536079 COL16A1Q07092 1604 aaPredicted RBP25.43■■□□□ 1.66
DDX55-204ENST00000536079 QRICH2Q9H0J4 1663 aa25.42■■□□□ 1.66
DDX55-204ENST00000536079 RGPD8O14715 1765 aaPredicted RBP25.41■■□□□ 1.66
DDX55-204ENST00000536079 NHSL1Q5SYE7 1610 aa25.41■■□□□ 1.66
DDX55-204ENST00000536079 ANKARQ7Z5J8 1434 aa25.39■■□□□ 1.66
DDX55-204ENST00000536079 TULP4Q9NRJ4 1543 aa25.39■■□□□ 1.66
DDX55-204ENST00000536079 FOXO3O43524 673 aa25.39■■□□□ 1.66
DDX55-204ENST00000536079 XPCQ01831 940 aaPredicted RBP25.39■■□□□ 1.66
DDX55-204ENST00000536079 PHF8Q9UPP1 1060 aa25.38■■□□□ 1.65
DDX55-204ENST00000536079 EIF3AQ14152 1382 aaKnown RBP25.38■■□□□ 1.65
DDX55-204ENST00000536079 PMFBP1Q8TBY8 1022 aa25.37■■□□□ 1.65
DDX55-204ENST00000536079 NUDT16Q96DE0 195 aaKnown RBP25.37■■□□□ 1.65
DDX55-204ENST00000536079 CABP2Q9NPB3 220 aa25.37■■□□□ 1.65
DDX55-204ENST00000536079 ATP7BP35670 1465 aa25.36■■□□□ 1.65
DDX55-204ENST00000536079 SOS2Q07890 1332 aaPredicted RBP25.36■■□□□ 1.65
DDX55-204ENST00000536079 ST20-MTHFSA0A0A6YYL1 179 aa25.34■■□□□ 1.65
DDX55-204ENST00000536079 PXDNQ92626 1479 aa25.33■■□□□ 1.65
DDX55-204ENST00000536079 SRPK2P78362 688 aaKnown RBP25.32■■□□□ 1.64
DDX55-204ENST00000536079 TESK2Q96S53 571 aa25.32■■□□□ 1.64
DDX55-204ENST00000536079 NPHP3Q7Z494 1330 aa25.32■■□□□ 1.64
DDX55-204ENST00000536079 USP47Q96K76 1375 aa25.31■■□□□ 1.64
DDX55-204ENST00000536079 JCADQ9P266 1359 aa25.31■■□□□ 1.64
DDX55-204ENST00000536079 EVC2Q86UK5 1308 aa25.29■■□□□ 1.64
DDX55-204ENST00000536079 KIF1AQ12756 1690 aa25.29■■□□□ 1.64
DDX55-204ENST00000536079 SBNO2Q9Y2G9 1366 aa25.29■■□□□ 1.64
DDX55-204ENST00000536079 KRT28Q7Z3Y7 464 aa25.28■■□□□ 1.64
DDX55-204ENST00000536079 LRRC59Q96AG4 307 aaKnown RBP25.28■■□□□ 1.64
DDX55-204ENST00000536079 CCDC61Q9Y6R9 512 aa25.27■■□□□ 1.64
DDX55-204ENST00000536079 PNPLA6Q8IY17 1366 aa25.26■■□□□ 1.63
DDX55-204ENST00000536079 TOPAZ1Q8N9V7 1692 aa25.26■■□□□ 1.63
DDX55-204ENST00000536079 PLEKHG3A1L390 1219 aa25.24■■□□□ 1.63
DDX55-204ENST00000536079 PSME1Q06323 249 aa25.23■■□□□ 1.63
DDX55-204ENST00000536079 CABP1Q9NZU7 370 aa25.23■■□□□ 1.63
DDX55-204ENST00000536079 MED1Q15648 1581 aaPredicted RBP25.22■■□□□ 1.63
DDX55-204ENST00000536079 PPIP5K1Q6PFW1 1433 aa25.22■■□□□ 1.63
DDX55-204ENST00000536079 ACEP12821 1306 aa25.22■■□□□ 1.63
DDX55-204ENST00000536079 NGDNQ8NEJ9 315 aaKnown RBP25.22■■□□□ 1.63
DDX55-204ENST00000536079 SHPRHQ149N8 1683 aa25.22■■□□□ 1.63
DDX55-204ENST00000536079 LRP6O75581 1613 aa25.22■■□□□ 1.63
DDX55-204ENST00000536079 POLR3AO14802 1390 aaPredicted RBP25.2■■□□□ 1.63
DDX55-204ENST00000536079 SPATA31A3Q5VYP0 1347 aa25.2■■□□□ 1.62
DDX55-204ENST00000536079 NUTM2BA6NNL0 878 aaPredicted RBP25.19■■□□□ 1.62
DDX55-204ENST00000536079 NUTM2EB1AL46 878 aaPredicted RBP25.19■■□□□ 1.62
DDX55-204ENST00000536079 NUTM2AQ8IVF1 878 aaPredicted RBP25.19■■□□□ 1.62
DDX55-204ENST00000536079 DISP3Q9P2K9 1392 aa25.18■■□□□ 1.62
DDX55-204ENST00000536079 ITSN1Q15811 1721 aa25.18■■□□□ 1.62
DDX55-204ENST00000536079 SPATA31A6Q5VVP1 1343 aa25.17■■□□□ 1.62
DDX55-204ENST00000536079 HSPA5P11021 654 aaKnown RBP25.17■■□□□ 1.62
DDX55-204ENST00000536079 SBNO1A3KN83 1393 aa25.17■■□□□ 1.62
DDX55-204ENST00000536079 TRPM3Q9HCF6 1732 aaPredicted RBP25.16■■□□□ 1.62
DDX55-204ENST00000536079 TNS3Q68CZ2 1445 aa25.15■■□□□ 1.62
DDX55-204ENST00000536079 ATAD2Q6PL18 1390 aa25.14■■□□□ 1.61
DDX55-204ENST00000536079 PLEKHG5O94827 1062 aa25.12■■□□□ 1.61
DDX55-204ENST00000536079 LMOD2Q6P5Q4 547 aa25.12■■□□□ 1.61
DDX55-204ENST00000536079 SLC12A5Q9H2X9 1139 aa25.12■■□□□ 1.61
DDX55-204ENST00000536079 COL22A1Q8NFW1 1626 aaPredicted RBP25.12■■□□□ 1.61
DDX55-204ENST00000536079 EIF4G2P78344 907 aaKnown RBP eCLIP25.11■■□□□ 1.61
DDX55-204ENST00000536079 CABLES1Q8TDN4 633 aa25.11■■□□□ 1.61
DDX55-204ENST00000536079 PAK3O75914 559 aaPredicted RBP25.1■■□□□ 1.61
DDX55-204ENST00000536079 TMF1P82094 1093 aa25.1■■□□□ 1.61
DDX55-204ENST00000536079 RGS17Q9UGC6 210 aaPredicted RBP25.1■■□□□ 1.61
DDX55-204ENST00000536079 CD163L1Q9NR16 1453 aa25.09■■□□□ 1.61
DDX55-204ENST00000536079 PUS7Q96PZ0 661 aaKnown RBP25.09■■□□□ 1.61
DDX55-204ENST00000536079 TMC1Q8TDI8 760 aa25.08■■□□□ 1.61
DDX55-204ENST00000536079 ALS2Q96Q42 1657 aa25.07■■□□□ 1.6
DDX55-204ENST00000536079 USP6P35125 1406 aa25.07■■□□□ 1.6
DDX55-204ENST00000536079 CPSF1Q10570 1443 aaKnown RBP25.07■■□□□ 1.6
DDX55-204ENST00000536079 ADAMTS2O95450 1211 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms