RNA–Protein interactions for RNA: ENST00000535561.5

SOD2-209, Transcript of superoxide dismutase 2, humanhuman

TSL 3

Gene SOD2, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-209ENST00000535561 XIRP1Q702N8 1843 aaKnown RBP20.59■□□□□ 0.89
SOD2-209ENST00000535561 PLEKHH1Q9ULM0 1364 aa20.58■□□□□ 0.88
SOD2-209ENST00000535561 CENPJQ9HC77 1338 aaPredicted RBP20.56■□□□□ 0.88
SOD2-209ENST00000535561 ARHGEF28Q8N1W1 1705 aaKnown RBP20.56■□□□□ 0.88
SOD2-209ENST00000535561 CDC42BPGQ6DT37 1551 aa20.55■□□□□ 0.88
SOD2-209ENST00000535561 UBAP1LF5GYI3 381 aa20.55■□□□□ 0.88
SOD2-209ENST00000535561 SLC24A1O60721 1099 aa20.54■□□□□ 0.88
SOD2-209ENST00000535561 ADGRB2O60241 1585 aa20.54■□□□□ 0.88
SOD2-209ENST00000535561 NALCNQ8IZF0 1738 aa20.53■□□□□ 0.88
SOD2-209ENST00000535561 FBXO41Q8TF61 875 aa20.53■□□□□ 0.88
SOD2-209ENST00000535561 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.53■□□□□ 0.88
SOD2-209ENST00000535561 SBNO2Q9Y2G9 1366 aa20.52■□□□□ 0.88
SOD2-209ENST00000535561 SLAIN2Q9P270 581 aa20.52■□□□□ 0.88
SOD2-209ENST00000535561 SAFB2Q14151 953 aaKnown RBP eCLIP20.5■□□□□ 0.87
SOD2-209ENST00000535561 MST1RQ04912 1400 aa20.49■□□□□ 0.87
SOD2-209ENST00000535561 USP47Q96K76 1375 aa20.48■□□□□ 0.87
SOD2-209ENST00000535561 ZEB1P37275 1124 aaPredicted RBP20.48■□□□□ 0.87
SOD2-209ENST00000535561 MINK1Q8N4C8 1332 aaPredicted RBP20.48■□□□□ 0.87
SOD2-209ENST00000535561 WASLO00401 505 aaPredicted RBP20.47■□□□□ 0.87
SOD2-209ENST00000535561 ANKARQ7Z5J8 1434 aa20.46■□□□□ 0.87
SOD2-209ENST00000535561 C1orf167Q5SNV9 1468 aa20.45■□□□□ 0.86
SOD2-209ENST00000535561 HIRIP3Q9BW71 556 aaPredicted RBP20.44■□□□□ 0.86
SOD2-209ENST00000535561 EVC2Q86UK5 1308 aa20.44■□□□□ 0.86
SOD2-209ENST00000535561 QRICH2Q9H0J4 1663 aa20.43■□□□□ 0.86
SOD2-209ENST00000535561 ST20-MTHFSA0A0A6YYL1 179 aa20.43■□□□□ 0.86
SOD2-209ENST00000535561 EIF4G2P78344 907 aaKnown RBP eCLIP20.42■□□□□ 0.86
SOD2-209ENST00000535561 TULP4Q9NRJ4 1543 aa20.42■□□□□ 0.86
SOD2-209ENST00000535561 FMN2Q9NZ56 1722 aa20.41■□□□□ 0.86
SOD2-209ENST00000535561 PIP4K2BP78356 416 aa20.41■□□□□ 0.86
SOD2-209ENST00000535561 PUS7Q96PZ0 661 aaKnown RBP20.41■□□□□ 0.86
SOD2-209ENST00000535561 CDK19Q9BWU1 502 aa20.41■□□□□ 0.86
SOD2-209ENST00000535561 TESK2Q96S53 571 aa20.4■□□□□ 0.86
SOD2-209ENST00000535561 BRINP3Q76B58 766 aa20.39■□□□□ 0.85
SOD2-209ENST00000535561 SCAF1Q9H7N4 1312 aaKnown RBP20.38■□□□□ 0.85
SOD2-209ENST00000535561 SRPK2P78362 688 aaKnown RBP20.36■□□□□ 0.85
SOD2-209ENST00000535561 CDCA8Q53HL2 280 aa20.36■□□□□ 0.85
SOD2-209ENST00000535561 ESCO1Q5FWF5 840 aa20.36■□□□□ 0.85
SOD2-209ENST00000535561 NUDT16Q96DE0 195 aaKnown RBP20.36■□□□□ 0.85
SOD2-209ENST00000535561 CCDC61Q9Y6R9 512 aa20.36■□□□□ 0.85
SOD2-209ENST00000535561 ATP7BP35670 1465 aa20.36■□□□□ 0.85
SOD2-209ENST00000535561 ROBO1Q9Y6N7 1651 aa20.35■□□□□ 0.85
SOD2-209ENST00000535561 TMF1P82094 1093 aa20.35■□□□□ 0.85
SOD2-209ENST00000535561 ATAD2Q6PL18 1390 aa20.34■□□□□ 0.85
SOD2-209ENST00000535561 PRR36Q9H6K5 1346 aa20.34■□□□□ 0.85
SOD2-209ENST00000535561 ORAI2Q96SN7 254 aa20.34■□□□□ 0.85
SOD2-209ENST00000535561 HSPA5P11021 654 aaKnown RBP20.33■□□□□ 0.85
SOD2-209ENST00000535561 PHF8Q9UPP1 1060 aa20.33■□□□□ 0.85
SOD2-209ENST00000535561 KIF1AQ12756 1690 aa20.32■□□□□ 0.84
SOD2-209ENST00000535561 NPHP3Q7Z494 1330 aa20.32■□□□□ 0.84
SOD2-209ENST00000535561 AHDC1Q5TGY3 1603 aaPredicted RBP20.32■□□□□ 0.84
SOD2-209ENST00000535561 NUTM2FA1L443 756 aa20.32■□□□□ 0.84
SOD2-209ENST00000535561 USP32Q8NFA0 1604 aa20.31■□□□□ 0.84
SOD2-209ENST00000535561 PLEKHG3A1L390 1219 aa20.31■□□□□ 0.84
SOD2-209ENST00000535561 CABP2Q9NPB3 220 aa20.31■□□□□ 0.84
SOD2-209ENST00000535561 NINLQ9Y2I6 1382 aa20.3■□□□□ 0.84
SOD2-209ENST00000535561 ITSN1Q15811 1721 aa20.28■□□□□ 0.84
SOD2-209ENST00000535561 POLR3AO14802 1390 aaPredicted RBP20.27■□□□□ 0.84
SOD2-209ENST00000535561 NHSL1Q5SYE7 1610 aa20.27■□□□□ 0.83
SOD2-209ENST00000535561 PPIP5K1Q6PFW1 1433 aa20.27■□□□□ 0.83
SOD2-209ENST00000535561 SOS2Q07890 1332 aaPredicted RBP20.27■□□□□ 0.83
SOD2-209ENST00000535561 TOPAZ1Q8N9V7 1692 aa20.26■□□□□ 0.83
SOD2-209ENST00000535561 DISP3Q9P2K9 1392 aa20.26■□□□□ 0.83
SOD2-209ENST00000535561 HSPA1LP34931 641 aa20.26■□□□□ 0.83
SOD2-209ENST00000535561 ILDR1Q86SU0 546 aaPredicted RBP20.26■□□□□ 0.83
SOD2-209ENST00000535561 BRD4O60885 1362 aaPredicted RBP20.25■□□□□ 0.83
SOD2-209ENST00000535561 FOXO3O43524 673 aa20.25■□□□□ 0.83
SOD2-209ENST00000535561 PSME1Q06323 249 aa20.25■□□□□ 0.83
SOD2-209ENST00000535561 NGDNQ8NEJ9 315 aaKnown RBP20.25■□□□□ 0.83
SOD2-209ENST00000535561 PXDNQ92626 1479 aa20.24■□□□□ 0.83
SOD2-209ENST00000535561 PMFBP1Q8TBY8 1022 aa20.23■□□□□ 0.83
SOD2-209ENST00000535561 LRRC59Q96AG4 307 aaKnown RBP20.23■□□□□ 0.83
SOD2-209ENST00000535561 CABP1Q9NZU7 370 aa20.23■□□□□ 0.83
SOD2-209ENST00000535561 ZNF692Q9BU19 519 aaPredicted RBP20.22■□□□□ 0.83
SOD2-209ENST00000535561 ACEP12821 1306 aa20.22■□□□□ 0.83
SOD2-209ENST00000535561 SBNO1A3KN83 1393 aa20.21■□□□□ 0.83
SOD2-209ENST00000535561 COL16A1Q07092 1604 aaPredicted RBP20.21■□□□□ 0.83
SOD2-209ENST00000535561 KRT28Q7Z3Y7 464 aa20.21■□□□□ 0.83
SOD2-209ENST00000535561 PHLPP1O60346 1717 aa20.21■□□□□ 0.83
SOD2-209ENST00000535561 RGPD8O14715 1765 aaPredicted RBP20.2■□□□□ 0.82
SOD2-209ENST00000535561 TERF2IPQ9NYB0 399 aa20.19■□□□□ 0.82
SOD2-209ENST00000535561 JCADQ9P266 1359 aa20.19■□□□□ 0.82
SOD2-209ENST00000535561 CPSF1Q10570 1443 aaKnown RBP20.19■□□□□ 0.82
SOD2-209ENST00000535561 DDX17Q92841 729 aaKnown RBP20.18■□□□□ 0.82
SOD2-209ENST00000535561 TMC1Q8TDI8 760 aa20.17■□□□□ 0.82
SOD2-209ENST00000535561 HDGFL2Q7Z4V5 671 aaPredicted RBP20.16■□□□□ 0.82
SOD2-209ENST00000535561 SPATA31A3Q5VYP0 1347 aa20.16■□□□□ 0.82
SOD2-209ENST00000535561 ARHGEF10O15013 1369 aa20.16■□□□□ 0.82
SOD2-209ENST00000535561 SLC12A5Q9H2X9 1139 aa20.15■□□□□ 0.82
SOD2-209ENST00000535561 USP6P35125 1406 aa20.15■□□□□ 0.82
SOD2-209ENST00000535561 TNS3Q68CZ2 1445 aa20.15■□□□□ 0.82
SOD2-209ENST00000535561 ANKRD36BQ8N2N9 1353 aa20.13■□□□□ 0.81
SOD2-209ENST00000535561 SPATA31A6Q5VVP1 1343 aa20.13■□□□□ 0.81
SOD2-209ENST00000535561 XPCQ01831 940 aaPredicted RBP20.13■□□□□ 0.81
SOD2-209ENST00000535561 CD163L1Q9NR16 1453 aa20.12■□□□□ 0.81
SOD2-209ENST00000535561 SSH2Q76I76 1423 aa20.12■□□□□ 0.81
SOD2-209ENST00000535561 KTN1Q86UP2 1357 aaKnown RBP20.12■□□□□ 0.81
SOD2-209ENST00000535561 PNPLA6Q8IY17 1366 aa20.11■□□□□ 0.81
SOD2-209ENST00000535561 KIF7Q2M1P5 1343 aa20.11■□□□□ 0.81
SOD2-209ENST00000535561 TTC21AQ8NDW8 1320 aa20.11■□□□□ 0.81
SOD2-209ENST00000535561 C11orf95C9JLR9 678 aaPredicted RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms