RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 CCDC73Q6ZRK6 1079 aa21.98■■□□□ 1.11
SFSWAP-203ENST00000535236 NLRP6P59044 892 aa21.98■■□□□ 1.11
SFSWAP-203ENST00000535236 GGNBP2Q9H3C7 697 aa21.98■■□□□ 1.11
SFSWAP-203ENST00000535236 FBXO3Q9UK99 471 aa21.98■■□□□ 1.11
SFSWAP-203ENST00000535236 R3HCC1Q9Y3T6 440 aaKnown RBP21.98■■□□□ 1.11
SFSWAP-203ENST00000535236 MYOM3Q5VTT5 1437 aa21.98■■□□□ 1.11
SFSWAP-203ENST00000535236 STAC3Q96MF2 364 aa21.97■■□□□ 1.11
SFSWAP-203ENST00000535236 CT47A1Q5JQC4 288 aaPredicted RBP21.97■■□□□ 1.11
SFSWAP-203ENST00000535236 CABP2Q9NPB3 220 aa21.96■■□□□ 1.11
SFSWAP-203ENST00000535236 CHMP5Q9NZZ3 219 aa21.96■■□□□ 1.11
SFSWAP-203ENST00000535236 LNPKQ9C0E8 428 aa21.95■■□□□ 1.1
SFSWAP-203ENST00000535236 DCAF8L1A6NGE4 600 aa21.95■■□□□ 1.1
SFSWAP-203ENST00000535236 XBP1P17861 261 aa21.95■■□□□ 1.1
SFSWAP-203ENST00000535236 NAP1L1P55209 391 aaKnown RBP21.95■■□□□ 1.1
SFSWAP-203ENST00000535236 IKQ13123 557 aaPredicted RBP21.95■■□□□ 1.1
SFSWAP-203ENST00000535236 GSE1Q14687 1217 aa21.95■■□□□ 1.1
SFSWAP-203ENST00000535236 GPRASP1Q5JY77 1395 aa21.94■■□□□ 1.1
SFSWAP-203ENST00000535236 ODF2Q5BJF6 829 aa21.94■■□□□ 1.1
SFSWAP-203ENST00000535236 NINLQ9Y2I6 1382 aa21.94■■□□□ 1.1
SFSWAP-203ENST00000535236 PATL2C9JE40 543 aaKnown RBP21.94■■□□□ 1.1
SFSWAP-203ENST00000535236 MTMR7Q9Y216 660 aa21.93■■□□□ 1.1
SFSWAP-203ENST00000535236 NUCB2P80303 420 aa21.93■■□□□ 1.1
SFSWAP-203ENST00000535236 TBC1D2BQ9UPU7 963 aa21.93■■□□□ 1.1
SFSWAP-203ENST00000535236 ATAD2BQ9ULI0 1458 aa21.91■■□□□ 1.1
SFSWAP-203ENST00000535236 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.91■■□□□ 1.12e-6■■■■■ 72
SFSWAP-203ENST00000535236 FAM177BA6PVY3 158 aa21.91■■□□□ 1.1
SFSWAP-203ENST00000535236 KIF6Q6ZMV9 814 aa21.91■■□□□ 1.1
SFSWAP-203ENST00000535236 FSD1Q9BTV5 496 aa21.91■■□□□ 1.1
SFSWAP-203ENST00000535236 EPS15P42566 896 aa21.9■■□□□ 1.1
SFSWAP-203ENST00000535236 PSMA5P28066 241 aa21.9■■□□□ 1.1
SFSWAP-203ENST00000535236 CNTROBQ8N137 903 aa21.9■■□□□ 1.1
SFSWAP-203ENST00000535236 SART3Q15020 963 aaKnown RBP21.9■■□□□ 1.1
SFSWAP-203ENST00000535236 ABTB2Q8N961 1025 aa21.89■■□□□ 1.1
SFSWAP-203ENST00000535236 RBM42Q9BTD8 480 aaKnown RBP21.89■■□□□ 1.09
SFSWAP-203ENST00000535236 CCDC30Q5VVM6 783 aa21.89■■□□□ 1.09
SFSWAP-203ENST00000535236 OLFM4Q6UX06 510 aa21.89■■□□□ 1.09
SFSWAP-203ENST00000535236 CDC45O75419 566 aa21.88■■□□□ 1.09
SFSWAP-203ENST00000535236 TMEM132EQ6IEE7 984 aa21.88■■□□□ 1.09
SFSWAP-203ENST00000535236 GAS2L2Q8NHY3 880 aa21.88■■□□□ 1.09
SFSWAP-203ENST00000535236 HSP90AA2PQ14568 343 aaPredicted RBP21.88■■□□□ 1.09
SFSWAP-203ENST00000535236 ESCO1Q5FWF5 840 aa21.88■■□□□ 1.09
SFSWAP-203ENST00000535236 PLEKHO1Q53GL0 409 aaPredicted RBP21.88■■□□□ 1.09
SFSWAP-203ENST00000535236 OFD1O75665 1012 aa21.88■■□□□ 1.09
SFSWAP-203ENST00000535236 AAMPQ13685 434 aa21.87■■□□□ 1.09
SFSWAP-203ENST00000535236 CLASRPQ8N2M8 674 aaKnown RBP21.87■■□□□ 1.09
SFSWAP-203ENST00000535236 GAPVD1Q14C86 1478 aa21.86■■□□□ 1.09
SFSWAP-203ENST00000535236 GNAI3P08754 354 aa21.86■■□□□ 1.09
SFSWAP-203ENST00000535236 C22orf23Q9BZE7 217 aa21.86■■□□□ 1.09
SFSWAP-203ENST00000535236 RUFY1Q96T51 708 aa21.86■■□□□ 1.09
SFSWAP-203ENST00000535236 CDR1P51861 262 aa21.85■■□□□ 1.09
SFSWAP-203ENST00000535236 DNAJC2Q99543 621 aaKnown RBP21.85■■□□□ 1.09
SFSWAP-203ENST00000535236 ZFYVE27Q5T4F4 411 aa21.85■■□□□ 1.09
SFSWAP-203ENST00000535236 PROSER2Q86WR7 435 aaPredicted RBP21.85■■□□□ 1.09
SFSWAP-203ENST00000535236 SLC3A2P08195 630 aaKnown RBP21.85■■□□□ 1.09
SFSWAP-203ENST00000535236 NAT10Q9H0A0 1025 aaKnown RBP21.85■■□□□ 1.09
SFSWAP-203ENST00000535236 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.85■■□□□ 1.09
SFSWAP-203ENST00000535236 PANK1Q8TE04 598 aa21.84■■□□□ 1.09
SFSWAP-203ENST00000535236 KDM4AO75164 1064 aa21.84■■□□□ 1.09
SFSWAP-203ENST00000535236 SURF6O75683 361 aaKnown RBP21.84■■□□□ 1.09
SFSWAP-203ENST00000535236 SMG6Q86US8 1419 aaKnown RBP21.83■■□□□ 1.09
SFSWAP-203ENST00000535236 CCAR1Q8IX12 1150 aaKnown RBP21.83■■□□□ 1.09
SFSWAP-203ENST00000535236 STRN4Q9NRL3 753 aa21.83■■□□□ 1.09
SFSWAP-203ENST00000535236 TMEM132AQ24JP5 1023 aa21.83■■□□□ 1.08
SFSWAP-203ENST00000535236 ZNF644Q9H582 1327 aaPredicted RBP21.82■■□□□ 1.08
SFSWAP-203ENST00000535236 TEX35Q5T0J7 233 aa21.82■■□□□ 1.08
SFSWAP-203ENST00000535236 TXNDC2Q86VQ3 553 aa21.82■■□□□ 1.08
SFSWAP-203ENST00000535236 SDF4Q9BRK5 362 aa21.82■■□□□ 1.08
SFSWAP-203ENST00000535236 RSPH6AQ9H0K4 717 aa21.82■■□□□ 1.08
SFSWAP-203ENST00000535236 MNS1Q8NEH6 495 aa21.82■■□□□ 1.08
SFSWAP-203ENST00000535236 AK7Q96M32 723 aa21.82■■□□□ 1.08
SFSWAP-203ENST00000535236 MTHFSP49914 203 aa21.81■■□□□ 1.08
SFSWAP-203ENST00000535236 IFT57Q9NWB7 429 aa21.81■■□□□ 1.08
SFSWAP-203ENST00000535236 KIF7Q2M1P5 1343 aa21.8■■□□□ 1.08
SFSWAP-203ENST00000535236 ZNF771Q7L3S4 317 aaPredicted RBP21.8■■□□□ 1.08
SFSWAP-203ENST00000535236 HSP90AB2PQ58FF8 381 aa21.8■■□□□ 1.08
SFSWAP-203ENST00000535236 CCDC7Q96M83 1385 aa21.8■■□□□ 1.08
SFSWAP-203ENST00000535236 TATP17735 454 aaPredicted RBP21.8■■□□□ 1.08
SFSWAP-203ENST00000535236 WWC2Q6AWC2 1192 aa21.8■■□□□ 1.08
SFSWAP-203ENST00000535236 PDILTQ8N807 584 aa21.8■■□□□ 1.08
SFSWAP-203ENST00000535236 CUX1P39880 1505 aa21.8■■□□□ 1.08
SFSWAP-203ENST00000535236 CCDC173Q0VFZ6 552 aa21.8■■□□□ 1.08
SFSWAP-203ENST00000535236 CNNM1Q9NRU3 951 aa21.79■■□□□ 1.08
SFSWAP-203ENST00000535236 CDK5RAP3Q96JB5 506 aa21.79■■□□□ 1.08
SFSWAP-203ENST00000535236 HIP1O00291 1037 aa21.79■■□□□ 1.08
SFSWAP-203ENST00000535236 GNL3LQ9NVN8 582 aaKnown RBP21.79■■□□□ 1.08
SFSWAP-203ENST00000535236 ANKRD50Q9ULJ7 1429 aa21.78■■□□□ 1.08
SFSWAP-203ENST00000535236 ACBD3Q9H3P7 528 aa21.78■■□□□ 1.08
SFSWAP-203ENST00000535236 SF3B2Q13435 895 aaKnown RBP21.78■■□□□ 1.08
SFSWAP-203ENST00000535236 TTC39AQ5SRH9 613 aa21.78■■□□□ 1.08
SFSWAP-203ENST00000535236 ERC1Q8IUD2 1116 aa21.78■■□□□ 1.08
SFSWAP-203ENST00000535236 RRP12Q5JTH9 1297 aaKnown RBP21.77■■□□□ 1.08
SFSWAP-203ENST00000535236 ARGLU1Q9NWB6 273 aaPredicted RBP21.77■■□□□ 1.08
SFSWAP-203ENST00000535236 PRDM2Q13029 1718 aa21.77■■□□□ 1.08
SFSWAP-203ENST00000535236 RUSC2Q8N2Y8 1516 aa21.77■■□□□ 1.08
SFSWAP-203ENST00000535236 ATP2B1P20020 1258 aa21.77■■□□□ 1.08
SFSWAP-203ENST00000535236 PPP1R1BQ9UD71 204 aaPredicted RBP21.77■■□□□ 1.08
SFSWAP-203ENST00000535236 FGD6Q6ZV73 1430 aa21.77■■□□□ 1.08
SFSWAP-203ENST00000535236 RRBP1Q9P2E9 1410 aaKnown RBP21.77■■□□□ 1.07
SFSWAP-203ENST00000535236 FYCO1Q9BQS8 1478 aa21.77■■□□□ 1.07
SFSWAP-203ENST00000535236 CCDC158Q5M9N0 1113 aa21.77■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms