RNA–Protein interactions for RNA: ENST00000534313.5

SIPA1-209, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,521 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-209ENST00000534313 C14orf93Q9H972 538 aaKnown RBP22.3■■□□□ 1.16
SIPA1-209ENST00000534313 CABP2Q9NPB3 220 aa22.3■■□□□ 1.16
SIPA1-209ENST00000534313 STK26Q9P289 416 aa22.3■■□□□ 1.16
SIPA1-209ENST00000534313 KIF1BO60333 1816 aa22.3■■□□□ 1.16
SIPA1-209ENST00000534313 NPM1P06748 294 aaKnown RBP eCLIP22.29■■□□□ 1.16
SIPA1-209ENST00000534313 RUNDC1Q96C34 613 aa22.29■■□□□ 1.16
SIPA1-209ENST00000534313 POLR3AO14802 1390 aaPredicted RBP22.29■■□□□ 1.16
SIPA1-209ENST00000534313 NPATQ14207 1427 aa22.29■■□□□ 1.16
SIPA1-209ENST00000534313 RAPGEF3O95398 923 aa22.28■■□□□ 1.16
SIPA1-209ENST00000534313 NFKBIBQ15653 356 aa22.28■■□□□ 1.16
SIPA1-209ENST00000534313 KIAA1210Q9ULL0 1709 aa22.27■■□□□ 1.16
SIPA1-209ENST00000534313 U2AF1L5P0DN76 240 aaPredicted RBP22.27■■□□□ 1.16
SIPA1-209ENST00000534313 RLBP1P12271 317 aa22.27■■□□□ 1.16
SIPA1-209ENST00000534313 U2AF1Q01081 240 aaKnown RBP eCLIP22.27■■□□□ 1.16
SIPA1-209ENST00000534313 KIDINS220Q9ULH0 1771 aa22.26■■□□□ 1.15
SIPA1-209ENST00000534313 SEC24BO95487 1268 aa22.26■■□□□ 1.15
SIPA1-209ENST00000534313 BRPF3Q9ULD4 1205 aa22.26■■□□□ 1.15
SIPA1-209ENST00000534313 RARSP54136 660 aaKnown RBP22.25■■□□□ 1.15
SIPA1-209ENST00000534313 ARXQ96QS3 562 aa22.25■■□□□ 1.15
SIPA1-209ENST00000534313 CGNL1Q0VF96 1302 aa22.25■■□□□ 1.15
SIPA1-209ENST00000534313 PDE3AQ14432 1141 aa22.24■■□□□ 1.15
SIPA1-209ENST00000534313 USP35Q9P2H5 1018 aa22.24■■□□□ 1.15
SIPA1-209ENST00000534313 ZNF518AQ6AHZ1 1483 aa22.22■■□□□ 1.15
SIPA1-209ENST00000534313 CFAP53Q96M91 514 aa22.22■■□□□ 1.15
SIPA1-209ENST00000534313 PCDHB15Q9Y5E8 787 aa22.22■■□□□ 1.15
SIPA1-209ENST00000534313 NRXN1Q9ULB1 1477 aa22.21■■□□□ 1.15
SIPA1-209ENST00000534313 SBNO2Q9Y2G9 1366 aa22.21■■□□□ 1.15
SIPA1-209ENST00000534313 U2SURPO15042 1029 aaKnown RBP22.21■■□□□ 1.15
SIPA1-209ENST00000534313 TSR2Q969E8 191 aaKnown RBP22.2■■□□□ 1.15
SIPA1-209ENST00000534313 GGNBP2Q9H3C7 697 aa22.2■■□□□ 1.14
SIPA1-209ENST00000534313 ADGRB3O60242 1522 aa22.2■■□□□ 1.14
SIPA1-209ENST00000534313 CD109Q6YHK3 1445 aa22.19■■□□□ 1.14
SIPA1-209ENST00000534313 SRPK2P78362 688 aaKnown RBP22.19■■□□□ 1.14
SIPA1-209ENST00000534313 IFT172Q9UG01 1749 aa22.18■■□□□ 1.14
SIPA1-209ENST00000534313 NGEFQ8N5V2 710 aa22.18■■□□□ 1.14
SIPA1-209ENST00000534313 EVC2Q86UK5 1308 aa22.18■■□□□ 1.14
SIPA1-209ENST00000534313 FRAT2O75474 233 aaPredicted RBP22.18■■□□□ 1.14
SIPA1-209ENST00000534313 QRICH2Q9H0J4 1663 aa22.15■■□□□ 1.14
SIPA1-209ENST00000534313 ADGRB1O14514 1584 aa22.15■■□□□ 1.14
SIPA1-209ENST00000534313 NEURL4Q96JN8 1562 aa22.15■■□□□ 1.14
SIPA1-209ENST00000534313 IDI1Q13907 227 aa22.15■■□□□ 1.14
SIPA1-209ENST00000534313 USP19O94966 1318 aa22.15■■□□□ 1.14
SIPA1-209ENST00000534313 MINK1Q8N4C8 1332 aaPredicted RBP22.15■■□□□ 1.14
SIPA1-209ENST00000534313 SHPRHQ149N8 1683 aa22.14■■□□□ 1.13
SIPA1-209ENST00000534313 VGFO15240 615 aaPredicted RBP22.13■■□□□ 1.13
SIPA1-209ENST00000534313 GSE1Q14687 1217 aa22.13■■□□□ 1.13
SIPA1-209ENST00000534313 WDR63Q8IWG1 891 aa22.13■■□□□ 1.13
SIPA1-209ENST00000534313 POGZQ7Z3K3 1410 aa22.13■■□□□ 1.13
SIPA1-209ENST00000534313 PDZRN3Q9UPQ7 1066 aa22.13■■□□□ 1.13
SIPA1-209ENST00000534313 FRMPD1Q5SYB0 1578 aa22.12■■□□□ 1.13
SIPA1-209ENST00000534313 MYO3AQ8NEV4 1616 aa22.12■■□□□ 1.13
SIPA1-209ENST00000534313 SLKQ9H2G2 1235 aaPredicted RBP22.12■■□□□ 1.13
SIPA1-209ENST00000534313 LMTK2Q8IWU2 1503 aa22.12■■□□□ 1.13
SIPA1-209ENST00000534313 PHF23Q9BUL5 403 aaPredicted RBP22.11■■□□□ 1.13
SIPA1-209ENST00000534313 SETBP1Q9Y6X0 1596 aa22.1■■□□□ 1.13
SIPA1-209ENST00000534313 FTSJ3Q8IY81 847 aaKnown RBP22.1■■□□□ 1.13
SIPA1-209ENST00000534313 MAPK8IP3Q9UPT6 1336 aa22.1■■□□□ 1.13
SIPA1-209ENST00000534313 FBLN1P23142 703 aa22.1■■□□□ 1.13
SIPA1-209ENST00000534313 MYH16Q9H6N6 1097 aa22.1■■□□□ 1.13
SIPA1-209ENST00000534313 RPGRIP1LQ68CZ1 1315 aa22.09■■□□□ 1.13
SIPA1-209ENST00000534313 EXOSC9Q06265 439 aaKnown RBP22.09■■□□□ 1.13
SIPA1-209ENST00000534313 IQSEC2Q5JU85 1478 aa22.09■■□□□ 1.13
SIPA1-209ENST00000534313 PMFBP1Q8TBY8 1022 aa22.09■■□□□ 1.13
SIPA1-209ENST00000534313 ANKRD36BQ8N2N9 1353 aa22.09■■□□□ 1.13
SIPA1-209ENST00000534313 PPLO60437 1756 aa22.08■■□□□ 1.13
SIPA1-209ENST00000534313 SMC4Q9NTJ3 1288 aa22.08■■□□□ 1.12
SIPA1-209ENST00000534313 TULP4Q9NRJ4 1543 aa22.08■■□□□ 1.12
SIPA1-209ENST00000534313 A0A1W2PP64 1363 aa22.07■■□□□ 1.12
SIPA1-209ENST00000534313 PRAM1Q96QH2 718 aa22.07■■□□□ 1.12
SIPA1-209ENST00000534313 POGKQ9P215 609 aa22.07■■□□□ 1.12
SIPA1-209ENST00000534313 ABCC3O15438 1527 aa22.07■■□□□ 1.12
SIPA1-209ENST00000534313 NINLQ9Y2I6 1382 aa22.06■■□□□ 1.12
SIPA1-209ENST00000534313 SPRYD3Q8NCJ5 442 aa22.06■■□□□ 1.12
SIPA1-209ENST00000534313 GLI2P10070 1586 aa22.05■■□□□ 1.12
SIPA1-209ENST00000534313 ZKSCAN2Q63HK3 967 aa22.05■■□□□ 1.12
SIPA1-209ENST00000534313 MVPQ14764 893 aaKnown RBP22.04■■□□□ 1.12
SIPA1-209ENST00000534313 DZIP1LQ8IYY4 767 aaKnown RBP22.04■■□□□ 1.12
SIPA1-209ENST00000534313 TMPOP42166 694 aaKnown RBP22.03■■□□□ 1.12
SIPA1-209ENST00000534313 CCDC27Q2M243 656 aa22.03■■□□□ 1.12
SIPA1-209ENST00000534313 MLH3Q9UHC1 1453 aa22.03■■□□□ 1.12
SIPA1-209ENST00000534313 FBXO31Q5XUX0 539 aaPredicted RBP22.03■■□□□ 1.12
SIPA1-209ENST00000534313 ITPRIPQ8IWB1 547 aa22.03■■□□□ 1.12
SIPA1-209ENST00000534313 OSCARQ8IYS5 282 aa22.03■■□□□ 1.12
SIPA1-209ENST00000534313 RWDD1Q9H446 243 aaPredicted RBP22.03■■□□□ 1.12
SIPA1-209ENST00000534313 SSH1Q8WYL5 1049 aa22.02■■□□□ 1.12
SIPA1-209ENST00000534313 ZC3H13Q5T200 1668 aaKnown RBP22.02■■□□□ 1.12
SIPA1-209ENST00000534313 FYB1O15117 783 aa22.02■■□□□ 1.12
SIPA1-209ENST00000534313 TRIM35Q9UPQ4 493 aa22.02■■□□□ 1.12
SIPA1-209ENST00000534313 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.01■■□□□ 1.11
SIPA1-209ENST00000534313 SIGLEC1Q9BZZ2 1709 aa22.01■■□□□ 1.11
SIPA1-209ENST00000534313 HECW2Q9P2P5 1572 aa22.01■■□□□ 1.11
SIPA1-209ENST00000534313 TRIM27P14373 513 aa22.01■■□□□ 1.11
SIPA1-209ENST00000534313 RIPK4P57078 832 aa22.01■■□□□ 1.11
SIPA1-209ENST00000534313 PLEKHF1Q96S99 279 aa22■■□□□ 1.11
SIPA1-209ENST00000534313 NOB1Q9ULX3 412 aaKnown RBP21.99■■□□□ 1.11
SIPA1-209ENST00000534313 UPF2Q9HAU5 1272 aaKnown RBP21.98■■□□□ 1.11
SIPA1-209ENST00000534313 CABP1Q9NZU7 370 aa21.98■■□□□ 1.11
SIPA1-209ENST00000534313 STAG3Q9UJ98 1225 aa21.98■■□□□ 1.11
SIPA1-209ENST00000534313 NEXMIFQ5QGS0 1516 aa21.97■■□□□ 1.11
SIPA1-209ENST00000534313 CAMSAP1Q5T5Y3 1602 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms