RNA–Protein interactions for RNA: ENST00000534131.1

CTSC-209, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-209ENST00000534131 TECPR2O15040 1411 aa16.66■□□□□ 0.26
CTSC-209ENST00000534131 PTCH1Q13635 1447 aa16.66■□□□□ 0.26
CTSC-209ENST00000534131 C14orf37Q86TY3 774 aa16.66■□□□□ 0.26
CTSC-209ENST00000534131 FAM135BQ49AJ0 1406 aa16.64■□□□□ 0.25
CTSC-209ENST00000534131 XIRP1Q702N8 1843 aaKnown RBP16.63■□□□□ 0.25
CTSC-209ENST00000534131 NCOA3Q9Y6Q9 1424 aa16.63■□□□□ 0.25
CTSC-209ENST00000534131 TOM1O60784 492 aa16.63■□□□□ 0.25
CTSC-209ENST00000534131 PIP4K2BP78356 416 aa16.62■□□□□ 0.25
CTSC-209ENST00000534131 PRAM1Q96QH2 718 aa16.62■□□□□ 0.25
CTSC-209ENST00000534131 QRICH2Q9H0J4 1663 aa16.62■□□□□ 0.25
CTSC-209ENST00000534131 LRRC7Q96NW7 1537 aa16.61■□□□□ 0.25
CTSC-209ENST00000534131 SLC24A1O60721 1099 aa16.61■□□□□ 0.25
CTSC-209ENST00000534131 WAPLQ7Z5K2 1190 aa16.61■□□□□ 0.25
CTSC-209ENST00000534131 CENPJQ9HC77 1338 aaPredicted RBP16.61■□□□□ 0.25
CTSC-209ENST00000534131 ROBO2Q9HCK4 1378 aa16.61■□□□□ 0.25
CTSC-209ENST00000534131 DCAF8L1A6NGE4 600 aa16.6■□□□□ 0.25
CTSC-209ENST00000534131 EIF4G2P78344 907 aaKnown RBP eCLIP16.6■□□□□ 0.25
CTSC-209ENST00000534131 MSH6P52701 1360 aa16.6■□□□□ 0.25
CTSC-209ENST00000534131 TMEM94Q12767 1356 aa16.6■□□□□ 0.25
CTSC-209ENST00000534131 SAFB2Q14151 953 aaKnown RBP eCLIP16.59■□□□□ 0.25
CTSC-209ENST00000534131 USP47Q96K76 1375 aa16.58■□□□□ 0.24
CTSC-209ENST00000534131 NALCNQ8IZF0 1738 aa16.58■□□□□ 0.24
CTSC-209ENST00000534131 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.57■□□□□ 0.24
CTSC-209ENST00000534131 C19orf44Q9H6X5 657 aa16.57■□□□□ 0.24
CTSC-209ENST00000534131 ATF3P18847 181 aa16.56■□□□□ 0.24
CTSC-209ENST00000534131 RBM33Q96EV2 1170 aaKnown RBP16.56■□□□□ 0.24
CTSC-209ENST00000534131 ADGRL3Q9HAR2 1447 aa16.55■□□□□ 0.24
CTSC-209ENST00000534131 DISP3Q9P2K9 1392 aa16.55■□□□□ 0.24
CTSC-209ENST00000534131 PLEKHH1Q9ULM0 1364 aa16.55■□□□□ 0.24
CTSC-209ENST00000534131 MINK1Q8N4C8 1332 aaPredicted RBP16.55■□□□□ 0.24
CTSC-209ENST00000534131 ST20-MTHFSA0A0A6YYL1 179 aa16.54■□□□□ 0.24
CTSC-209ENST00000534131 CADPS2Q86UW7 1296 aa16.54■□□□□ 0.24
CTSC-209ENST00000534131 HSPA1LP34931 641 aa16.53■□□□□ 0.24
CTSC-209ENST00000534131 DCCP43146 1447 aa16.53■□□□□ 0.24
CTSC-209ENST00000534131 ADGRB2O60241 1585 aa16.52■□□□□ 0.24
CTSC-209ENST00000534131 EVC2Q86UK5 1308 aa16.52■□□□□ 0.24
CTSC-209ENST00000534131 CDC42BPGQ6DT37 1551 aa16.51■□□□□ 0.23
CTSC-209ENST00000534131 HSPA5P11021 654 aaKnown RBP16.51■□□□□ 0.23
CTSC-209ENST00000534131 HIRIP3Q9BW71 556 aaPredicted RBP16.51■□□□□ 0.23
CTSC-209ENST00000534131 SBNO2Q9Y2G9 1366 aa16.51■□□□□ 0.23
CTSC-209ENST00000534131 FMN2Q9NZ56 1722 aa16.5■□□□□ 0.23
CTSC-209ENST00000534131 TMF1P82094 1093 aa16.5■□□□□ 0.23
CTSC-209ENST00000534131 WASLO00401 505 aaPredicted RBP16.49■□□□□ 0.23
CTSC-209ENST00000534131 SRPK2P78362 688 aaKnown RBP16.49■□□□□ 0.23
CTSC-209ENST00000534131 ITSN1Q15811 1721 aa16.49■□□□□ 0.23
CTSC-209ENST00000534131 CDCA8Q53HL2 280 aa16.49■□□□□ 0.23
CTSC-209ENST00000534131 RGPD8O14715 1765 aaPredicted RBP16.49■□□□□ 0.23
CTSC-209ENST00000534131 POTEDQ86YR6 584 aa16.47■□□□□ 0.23
CTSC-209ENST00000534131 CDK19Q9BWU1 502 aa16.47■□□□□ 0.23
CTSC-209ENST00000534131 ZBTB22O15209 634 aa16.45■□□□□ 0.22
CTSC-209ENST00000534131 TULP4Q9NRJ4 1543 aa16.45■□□□□ 0.22
CTSC-209ENST00000534131 TESK2Q96S53 571 aa16.44■□□□□ 0.22
CTSC-209ENST00000534131 SLAIN2Q9P270 581 aa16.44■□□□□ 0.22
CTSC-209ENST00000534131 ANKARQ7Z5J8 1434 aa16.44■□□□□ 0.22
CTSC-209ENST00000534131 NUTM2FA1L443 756 aa16.43■□□□□ 0.22
CTSC-209ENST00000534131 PUS7Q96PZ0 661 aaKnown RBP16.43■□□□□ 0.22
CTSC-209ENST00000534131 NUDT16Q96DE0 195 aaKnown RBP16.42■□□□□ 0.22
CTSC-209ENST00000534131 ATAD2Q6PL18 1390 aa16.41■□□□□ 0.22
CTSC-209ENST00000534131 KIF1AQ12756 1690 aa16.41■□□□□ 0.22
CTSC-209ENST00000534131 ESCO1Q5FWF5 840 aa16.41■□□□□ 0.22
CTSC-209ENST00000534131 ILDR2Q71H61 639 aa16.41■□□□□ 0.22
CTSC-209ENST00000534131 CABP2Q9NPB3 220 aa16.41■□□□□ 0.22
CTSC-209ENST00000534131 MST1RQ04912 1400 aa16.41■□□□□ 0.22
CTSC-209ENST00000534131 C1orf167Q5SNV9 1468 aa16.41■□□□□ 0.22
CTSC-209ENST00000534131 POLR3GLQ9BT43 218 aa16.4■□□□□ 0.22
CTSC-209ENST00000534131 CCDC61Q9Y6R9 512 aa16.4■□□□□ 0.22
CTSC-209ENST00000534131 USP32Q8NFA0 1604 aa16.39■□□□□ 0.21
CTSC-209ENST00000534131 FOXD4L1Q9NU39 408 aa16.39■□□□□ 0.21
CTSC-209ENST00000534131 TOPAZ1Q8N9V7 1692 aa16.38■□□□□ 0.21
CTSC-209ENST00000534131 ROBO1Q9Y6N7 1651 aa16.38■□□□□ 0.21
CTSC-209ENST00000534131 SLC4A2P04920 1241 aa16.38■□□□□ 0.21
CTSC-209ENST00000534131 TMC1Q8TDI8 760 aa16.37■□□□□ 0.21
CTSC-209ENST00000534131 PHF8Q9UPP1 1060 aa16.37■□□□□ 0.21
CTSC-209ENST00000534131 ATP7BP35670 1465 aa16.36■□□□□ 0.21
CTSC-209ENST00000534131 MED1Q15648 1581 aaPredicted RBP16.36■□□□□ 0.21
CTSC-209ENST00000534131 NGDNQ8NEJ9 315 aaKnown RBP16.36■□□□□ 0.21
CTSC-209ENST00000534131 NINLQ9Y2I6 1382 aa16.36■□□□□ 0.21
CTSC-209ENST00000534131 PPIP5K1Q6PFW1 1433 aa16.36■□□□□ 0.21
CTSC-209ENST00000534131 ORAI2Q96SN7 254 aa16.35■□□□□ 0.21
CTSC-209ENST00000534131 PMFBP1Q8TBY8 1022 aa16.34■□□□□ 0.21
CTSC-209ENST00000534131 PRR36Q9H6K5 1346 aa16.34■□□□□ 0.21
CTSC-209ENST00000534131 PLEKHG3A1L390 1219 aa16.33■□□□□ 0.2
CTSC-209ENST00000534131 PSME1Q06323 249 aa16.33■□□□□ 0.2
CTSC-209ENST00000534131 BRINP3Q76B58 766 aa16.33■□□□□ 0.2
CTSC-209ENST00000534131 HDGFL2Q7Z4V5 671 aaPredicted RBP16.33■□□□□ 0.2
CTSC-209ENST00000534131 CABP1Q9NZU7 370 aa16.33■□□□□ 0.2
CTSC-209ENST00000534131 AKAP12Q02952 1782 aa16.33■□□□□ 0.2
CTSC-209ENST00000534131 PHLPP1O60346 1717 aa16.32■□□□□ 0.2
CTSC-209ENST00000534131 NPHP3Q7Z494 1330 aa16.32■□□□□ 0.2
CTSC-209ENST00000534131 ZNF692Q9BU19 519 aaPredicted RBP16.32■□□□□ 0.2
CTSC-209ENST00000534131 TERF2IPQ9NYB0 399 aa16.32■□□□□ 0.2
CTSC-209ENST00000534131 NHSL1Q5SYE7 1610 aa16.31■□□□□ 0.2
CTSC-209ENST00000534131 ACEP12821 1306 aa16.3■□□□□ 0.2
CTSC-209ENST00000534131 KIF7Q2M1P5 1343 aa16.3■□□□□ 0.2
CTSC-209ENST00000534131 ZNF316A6NFI3 1004 aaPredicted RBP16.29■□□□□ 0.2
CTSC-209ENST00000534131 FOXO3O43524 673 aa16.29■□□□□ 0.2
CTSC-209ENST00000534131 SLC12A5Q9H2X9 1139 aa16.29■□□□□ 0.2
CTSC-209ENST00000534131 MYOM1P52179 1685 aa16.29■□□□□ 0.2
CTSC-209ENST00000534131 CCDC7Q96M83 1385 aa16.28■□□□□ 0.2
CTSC-209ENST00000534131 AHDC1Q5TGY3 1603 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms