RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 ESCO1Q5FWF5 840 aa18.26■□□□□ 0.51
CAPRIN1-213ENST00000533562 C14orf93Q9H972 538 aaKnown RBP18.26■□□□□ 0.51
CAPRIN1-213ENST00000533562 SIRT1Q96EB6 747 aa18.25■□□□□ 0.51
CAPRIN1-213ENST00000533562 SOS2Q07890 1332 aaPredicted RBP18.24■□□□□ 0.51
CAPRIN1-213ENST00000533562 TECPR2O15040 1411 aa18.24■□□□□ 0.51
CAPRIN1-213ENST00000533562 IFT172Q9UG01 1749 aa18.24■□□□□ 0.51
CAPRIN1-213ENST00000533562 PNPLA6Q8IY17 1366 aa18.23■□□□□ 0.51
CAPRIN1-213ENST00000533562 DHX57Q6P158 1386 aaKnown RBP18.22■□□□□ 0.51
CAPRIN1-213ENST00000533562 RXRBP28702 533 aa18.22■□□□□ 0.51
CAPRIN1-213ENST00000533562 CFAP70Q5T0N1 1121 aa18.22■□□□□ 0.51
CAPRIN1-213ENST00000533562 YTHDC2Q9H6S0 1430 aaKnown RBP18.22■□□□□ 0.51
CAPRIN1-213ENST00000533562 NPHP3Q7Z494 1330 aa18.22■□□□□ 0.51
CAPRIN1-213ENST00000533562 AFF2P51816 1311 aa18.21■□□□□ 0.51
CAPRIN1-213ENST00000533562 C8orf37Q96NL8 207 aa18.2■□□□□ 0.5
CAPRIN1-213ENST00000533562 CDC42BPGQ6DT37 1551 aa18.2■□□□□ 0.5
CAPRIN1-213ENST00000533562 NUTM2FA1L443 756 aa18.19■□□□□ 0.5
CAPRIN1-213ENST00000533562 FOXO3O43524 673 aa18.19■□□□□ 0.5
CAPRIN1-213ENST00000533562 STAC3Q96MF2 364 aa18.19■□□□□ 0.5
CAPRIN1-213ENST00000533562 LAMC1P11047 1609 aa18.19■□□□□ 0.5
CAPRIN1-213ENST00000533562 MYOM2P54296 1465 aa18.19■□□□□ 0.5
CAPRIN1-213ENST00000533562 NRXN1Q9ULB1 1477 aa18.19■□□□□ 0.5
CAPRIN1-213ENST00000533562 PLEKHH1Q9ULM0 1364 aa18.18■□□□□ 0.5
CAPRIN1-213ENST00000533562 ADAMTS2O95450 1211 aa18.18■□□□□ 0.5
CAPRIN1-213ENST00000533562 NGLY1Q96IV0 654 aa18.18■□□□□ 0.5
CAPRIN1-213ENST00000533562 KDM2AQ9Y2K7 1162 aa18.17■□□□□ 0.5
CAPRIN1-213ENST00000533562 DCAF11Q8TEB1 546 aa18.16■□□□□ 0.5
CAPRIN1-213ENST00000533562 QTRT2Q9H974 415 aaKnown RBP18.16■□□□□ 0.5
CAPRIN1-213ENST00000533562 KNDC1Q76NI1 1749 aa18.15■□□□□ 0.5
CAPRIN1-213ENST00000533562 PRAM1Q96QH2 718 aa18.15■□□□□ 0.5
CAPRIN1-213ENST00000533562 POGKQ9P215 609 aa18.15■□□□□ 0.5
CAPRIN1-213ENST00000533562 XPCQ01831 940 aaPredicted RBP18.13■□□□□ 0.49
CAPRIN1-213ENST00000533562 RBM6P78332 1123 aaKnown RBP18.12■□□□□ 0.49
CAPRIN1-213ENST00000533562 SAFB2Q14151 953 aaKnown RBP eCLIP18.12■□□□□ 0.49
CAPRIN1-213ENST00000533562 PXDNQ92626 1479 aa18.1■□□□□ 0.49
CAPRIN1-213ENST00000533562 USP21Q9UK80 565 aa18.1■□□□□ 0.49
CAPRIN1-213ENST00000533562 TRAK1Q9UPV9 953 aa18.1■□□□□ 0.49
CAPRIN1-213ENST00000533562 CDK12Q9NYV4 1490 aaPredicted RBP18.09■□□□□ 0.49
CAPRIN1-213ENST00000533562 PSME1Q06323 249 aa18.09■□□□□ 0.49
CAPRIN1-213ENST00000533562 KRT28Q7Z3Y7 464 aa18.09■□□□□ 0.49
CAPRIN1-213ENST00000533562 FNBP4Q8N3X1 1017 aaPredicted RBP18.09■□□□□ 0.49
CAPRIN1-213ENST00000533562 PHF8Q9UPP1 1060 aa18.09■□□□□ 0.49
CAPRIN1-213ENST00000533562 FMN2Q9NZ56 1722 aa18.07■□□□□ 0.48
CAPRIN1-213ENST00000533562 TRPC5Q9UL62 973 aaPredicted RBP18.07■□□□□ 0.48
CAPRIN1-213ENST00000533562 DLC1Q96QB1 1528 aa18.07■□□□□ 0.48
CAPRIN1-213ENST00000533562 COL22A1Q8NFW1 1626 aaPredicted RBP18.06■□□□□ 0.48
CAPRIN1-213ENST00000533562 SPATA31A3Q5VYP0 1347 aa18.06■□□□□ 0.48
CAPRIN1-213ENST00000533562 UPF1Q92900 1129 aaKnown RBP eCLIP18.06■□□□□ 0.48
CAPRIN1-213ENST00000533562 KIF1AQ12756 1690 aa18.04■□□□□ 0.48
CAPRIN1-213ENST00000533562 ADGRB1O14514 1584 aa18.04■□□□□ 0.48
CAPRIN1-213ENST00000533562 HIRIP3Q9BW71 556 aaPredicted RBP18.03■□□□□ 0.48
CAPRIN1-213ENST00000533562 MINK1Q8N4C8 1332 aaPredicted RBP18.02■□□□□ 0.48
CAPRIN1-213ENST00000533562 EIF3AQ14152 1382 aaKnown RBP18.02■□□□□ 0.47
CAPRIN1-213ENST00000533562 ANKARQ7Z5J8 1434 aa18.01■□□□□ 0.47
CAPRIN1-213ENST00000533562 WASLO00401 505 aaPredicted RBP18.01■□□□□ 0.47
CAPRIN1-213ENST00000533562 HAP1P54257 671 aaPredicted RBP18.01■□□□□ 0.47
CAPRIN1-213ENST00000533562 PMFBP1Q8TBY8 1022 aa18.01■□□□□ 0.47
CAPRIN1-213ENST00000533562 LMOD2Q6P5Q4 547 aa18■□□□□ 0.47
CAPRIN1-213ENST00000533562 SBNO1A3KN83 1393 aa18■□□□□ 0.47
CAPRIN1-213ENST00000533562 RGPD8O14715 1765 aaPredicted RBP17.99■□□□□ 0.47
CAPRIN1-213ENST00000533562 RGS12O14924 1447 aa17.98■□□□□ 0.47
CAPRIN1-213ENST00000533562 ATRNO75882 1429 aa17.98■□□□□ 0.47
CAPRIN1-213ENST00000533562 TNS3Q68CZ2 1445 aa17.98■□□□□ 0.47
CAPRIN1-213ENST00000533562 BCL9LQ86UU0 1499 aa17.97■□□□□ 0.47
CAPRIN1-213ENST00000533562 ARHGEF10O15013 1369 aa17.97■□□□□ 0.47
CAPRIN1-213ENST00000533562 UNC5CLQ8IV45 518 aa17.97■□□□□ 0.47
CAPRIN1-213ENST00000533562 GJD4Q96KN9 370 aaPredicted RBP17.97■□□□□ 0.47
CAPRIN1-213ENST00000533562 ADGRB2O60241 1585 aa17.96■□□□□ 0.47
CAPRIN1-213ENST00000533562 GPRASP1Q5JY77 1395 aa17.96■□□□□ 0.47
CAPRIN1-213ENST00000533562 NGDNQ8NEJ9 315 aaKnown RBP17.95■□□□□ 0.46
CAPRIN1-213ENST00000533562 CABLES1Q8TDN4 633 aa17.95■□□□□ 0.46
CAPRIN1-213ENST00000533562 PLEKHG5O94827 1062 aa17.94■□□□□ 0.46
CAPRIN1-213ENST00000533562 MARF1Q9Y4F3 1742 aaKnown RBP17.94■□□□□ 0.46
CAPRIN1-213ENST00000533562 PRR36Q9H6K5 1346 aa17.94■□□□□ 0.46
CAPRIN1-213ENST00000533562 TULP4Q9NRJ4 1543 aa17.93■□□□□ 0.46
CAPRIN1-213ENST00000533562 ATAD2Q6PL18 1390 aa17.92■□□□□ 0.46
CAPRIN1-213ENST00000533562 USP32Q8NFA0 1604 aa17.92■□□□□ 0.46
CAPRIN1-213ENST00000533562 NUDT16Q96DE0 195 aaKnown RBP17.92■□□□□ 0.46
CAPRIN1-213ENST00000533562 CDK19Q9BWU1 502 aa17.92■□□□□ 0.46
CAPRIN1-213ENST00000533562 NBPF1Q3BBV0 1214 aa17.91■□□□□ 0.46
CAPRIN1-213ENST00000533562 SLIT2O94813 1529 aa17.91■□□□□ 0.46
CAPRIN1-213ENST00000533562 PAK3O75914 559 aaPredicted RBP17.9■□□□□ 0.46
CAPRIN1-213ENST00000533562 EP400Q96L91 3159 aa17.89■□□□□ 0.45
CAPRIN1-213ENST00000533562 FAM83GA6ND36 823 aa17.88■□□□□ 0.45
CAPRIN1-213ENST00000533562 VPS72Q15906 364 aa17.88■□□□□ 0.45
CAPRIN1-213ENST00000533562 CCDC61Q9Y6R9 512 aa17.88■□□□□ 0.45
CAPRIN1-213ENST00000533562 KIAA1210Q9ULL0 1709 aa17.88■□□□□ 0.45
CAPRIN1-213ENST00000533562 ARHGEF28Q8N1W1 1705 aaKnown RBP17.87■□□□□ 0.45
CAPRIN1-213ENST00000533562 L3MBTL2Q969R5 705 aa17.87■□□□□ 0.45
CAPRIN1-213ENST00000533562 CCDC9Q9Y3X0 531 aaKnown RBP17.87■□□□□ 0.45
CAPRIN1-213ENST00000533562 CCDC125Q86Z20 511 aa17.86■□□□□ 0.45
CAPRIN1-213ENST00000533562 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.86■□□□□ 0.45
CAPRIN1-213ENST00000533562 RALGAPBQ86X10 1494 aa17.85■□□□□ 0.45
CAPRIN1-213ENST00000533562 CENPJQ9HC77 1338 aaPredicted RBP17.84■□□□□ 0.45
CAPRIN1-213ENST00000533562 PLEKHG3A1L390 1219 aa17.84■□□□□ 0.45
CAPRIN1-213ENST00000533562 NEUROD1Q13562 356 aa17.84■□□□□ 0.45
CAPRIN1-213ENST00000533562 SIN3AQ96ST3 1273 aa17.84■□□□□ 0.45
CAPRIN1-213ENST00000533562 ATP7BP35670 1465 aa17.83■□□□□ 0.45
CAPRIN1-213ENST00000533562 ACEP12821 1306 aa17.83■□□□□ 0.44
CAPRIN1-213ENST00000533562 SRPK2P78362 688 aaKnown RBP17.83■□□□□ 0.44
CAPRIN1-213ENST00000533562 NBPF8Q3BBV2 869 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms