RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 CFAP70Q5T0N1 1121 aa32.56■■■□□ 2.8
BEST1-207ENST00000533521 DLC1Q96QB1 1528 aa32.51■■■□□ 2.8
BEST1-207ENST00000533521 WAPLQ7Z5K2 1190 aa32.51■■■□□ 2.79
BEST1-207ENST00000533521 DCAF11Q8TEB1 546 aa32.51■■■□□ 2.79
BEST1-207ENST00000533521 LRRC59Q96AG4 307 aaKnown RBP32.51■■■□□ 2.79
BEST1-207ENST00000533521 ADGRB1O14514 1584 aa32.49■■■□□ 2.79
BEST1-207ENST00000533521 RGS17Q9UGC6 210 aaPredicted RBP32.48■■■□□ 2.79
BEST1-207ENST00000533521 PLEKHH1Q9ULM0 1364 aa32.46■■■□□ 2.79
BEST1-207ENST00000533521 ORAI2Q96SN7 254 aa32.45■■■□□ 2.79
BEST1-207ENST00000533521 KDM2AQ9Y2K7 1162 aa32.44■■■□□ 2.78
BEST1-207ENST00000533521 SOS2Q07890 1332 aaPredicted RBP32.44■■■□□ 2.78
BEST1-207ENST00000533521 FMN2Q9NZ56 1722 aa32.43■■■□□ 2.78
BEST1-207ENST00000533521 LRP6O75581 1613 aa32.4■■■□□ 2.78
BEST1-207ENST00000533521 NPHP3Q7Z494 1330 aa32.38■■■□□ 2.77
BEST1-207ENST00000533521 KIAA1210Q9ULL0 1709 aa32.37■■■□□ 2.77
BEST1-207ENST00000533521 PNPLA6Q8IY17 1366 aa32.37■■■□□ 2.77
BEST1-207ENST00000533521 DDX17Q92841 729 aaKnown RBP32.37■■■□□ 2.77
BEST1-207ENST00000533521 PRAM1Q96QH2 718 aa32.37■■■□□ 2.77
BEST1-207ENST00000533521 ESCO1Q5FWF5 840 aa32.36■■■□□ 2.77
BEST1-207ENST00000533521 ADGRB2O60241 1585 aa32.35■■■□□ 2.77
BEST1-207ENST00000533521 KIF1AQ12756 1690 aa32.34■■■□□ 2.77
BEST1-207ENST00000533521 POGKQ9P215 609 aa32.33■■■□□ 2.77
BEST1-207ENST00000533521 PXDNQ92626 1479 aa32.3■■■□□ 2.76
BEST1-207ENST00000533521 MEX3CQ5U5Q3 659 aaKnown RBP32.29■■■□□ 2.76
BEST1-207ENST00000533521 POTEAQ6S8J7 498 aa32.29■■■□□ 2.76
BEST1-207ENST00000533521 TRAK1Q9UPV9 953 aa32.29■■■□□ 2.76
BEST1-207ENST00000533521 ANKARQ7Z5J8 1434 aa32.28■■■□□ 2.76
BEST1-207ENST00000533521 COL22A1Q8NFW1 1626 aaPredicted RBP32.28■■■□□ 2.76
BEST1-207ENST00000533521 ZNF772Q68DY9 489 aaPredicted RBP32.27■■■□□ 2.76
BEST1-207ENST00000533521 FOXO3O43524 673 aa32.25■■■□□ 2.75
BEST1-207ENST00000533521 EIF3AQ14152 1382 aaKnown RBP32.24■■■□□ 2.75
BEST1-207ENST00000533521 ARHGEF28Q8N1W1 1705 aaKnown RBP32.24■■■□□ 2.75
BEST1-207ENST00000533521 RGPD8O14715 1765 aaPredicted RBP32.24■■■□□ 2.75
BEST1-207ENST00000533521 NUTM2FA1L443 756 aa32.23■■■□□ 2.75
BEST1-207ENST00000533521 NUTM2BA6NNL0 878 aaPredicted RBP32.23■■■□□ 2.75
BEST1-207ENST00000533521 NUTM2EB1AL46 878 aaPredicted RBP32.23■■■□□ 2.75
BEST1-207ENST00000533521 NUTM2AQ8IVF1 878 aaPredicted RBP32.23■■■□□ 2.75
BEST1-207ENST00000533521 SAFB2Q14151 953 aaKnown RBP eCLIP32.22■■■□□ 2.75
BEST1-207ENST00000533521 TRIM26Q12899 539 aaPredicted RBP32.21■■■□□ 2.75
BEST1-207ENST00000533521 PHF8Q9UPP1 1060 aa32.19■■■□□ 2.74
BEST1-207ENST00000533521 USP32Q8NFA0 1604 aa32.18■■■□□ 2.74
BEST1-207ENST00000533521 L3MBTL2Q969R5 705 aa32.16■■■□□ 2.74
BEST1-207ENST00000533521 TULP4Q9NRJ4 1543 aa32.16■■■□□ 2.74
BEST1-207ENST00000533521 WASLO00401 505 aaPredicted RBP32.15■■■□□ 2.74
BEST1-207ENST00000533521 MINK1Q8N4C8 1332 aaPredicted RBP32.14■■■□□ 2.74
BEST1-207ENST00000533521 PSME1Q06323 249 aa32.13■■■□□ 2.73
BEST1-207ENST00000533521 SPATA31A3Q5VYP0 1347 aa32.13■■■□□ 2.73
BEST1-207ENST00000533521 AFF2P51816 1311 aa32.12■■■□□ 2.73
BEST1-207ENST00000533521 KRT28Q7Z3Y7 464 aa32.12■■■□□ 2.73
BEST1-207ENST00000533521 SIN3AQ96ST3 1273 aa32.12■■■□□ 2.73
BEST1-207ENST00000533521 SBNO1A3KN83 1393 aa32.11■■■□□ 2.73
BEST1-207ENST00000533521 NBPF1Q3BBV0 1214 aa32.1■■■□□ 2.73
BEST1-207ENST00000533521 HIRIP3Q9BW71 556 aaPredicted RBP32.1■■■□□ 2.73
BEST1-207ENST00000533521 XPCQ01831 940 aaPredicted RBP32.09■■■□□ 2.73
BEST1-207ENST00000533521 C8orf37Q96NL8 207 aa32.08■■■□□ 2.73
BEST1-207ENST00000533521 MARF1Q9Y4F3 1742 aaKnown RBP32.07■■■□□ 2.72
BEST1-207ENST00000533521 CDK12Q9NYV4 1490 aaPredicted RBP32.06■■■□□ 2.72
BEST1-207ENST00000533521 TNS3Q68CZ2 1445 aa32.06■■■□□ 2.72
BEST1-207ENST00000533521 PRR36Q9H6K5 1346 aa32.05■■■□□ 2.72
BEST1-207ENST00000533521 ADAMTS2O95450 1211 aa32.05■■■□□ 2.72
BEST1-207ENST00000533521 FNBP4Q8N3X1 1017 aaPredicted RBP32.05■■■□□ 2.72
BEST1-207ENST00000533521 NGLY1Q96IV0 654 aa32.05■■■□□ 2.72
BEST1-207ENST00000533521 ITSN1Q15811 1721 aa32.05■■■□□ 2.72
BEST1-207ENST00000533521 TRPM1Q7Z4N2 1603 aa32.04■■■□□ 2.72
BEST1-207ENST00000533521 RXRBP28702 533 aa32.03■■■□□ 2.72
BEST1-207ENST00000533521 NEUROD1Q13562 356 aa32.03■■■□□ 2.72
BEST1-207ENST00000533521 ARHGEF10O15013 1369 aa32.02■■■□□ 2.72
BEST1-207ENST00000533521 ATP7BP35670 1465 aa32.01■■■□□ 2.71
BEST1-207ENST00000533521 GPRASP1Q5JY77 1395 aa31.99■■■□□ 2.71
BEST1-207ENST00000533521 PMFBP1Q8TBY8 1022 aa31.99■■■□□ 2.71
BEST1-207ENST00000533521 TRPM3Q9HCF6 1732 aaPredicted RBP31.99■■■□□ 2.71
BEST1-207ENST00000533521 QTRT2Q9H974 415 aaKnown RBP31.98■■■□□ 2.71
BEST1-207ENST00000533521 CENPJQ9HC77 1338 aaPredicted RBP31.98■■■□□ 2.71
BEST1-207ENST00000533521 NUDT16Q96DE0 195 aaKnown RBP31.97■■■□□ 2.71
BEST1-207ENST00000533521 CDK19Q9BWU1 502 aa31.97■■■□□ 2.71
BEST1-207ENST00000533521 RBM6P78332 1123 aaKnown RBP31.96■■■□□ 2.71
BEST1-207ENST00000533521 USP21Q9UK80 565 aa31.94■■■□□ 2.7
BEST1-207ENST00000533521 CCDC61Q9Y6R9 512 aa31.94■■■□□ 2.7
BEST1-207ENST00000533521 TOPAZ1Q8N9V7 1692 aa31.93■■■□□ 2.7
BEST1-207ENST00000533521 ALS2Q96Q42 1657 aa31.93■■■□□ 2.7
BEST1-207ENST00000533521 TRPC5Q9UL62 973 aaPredicted RBP31.92■■■□□ 2.7
BEST1-207ENST00000533521 NGDNQ8NEJ9 315 aaKnown RBP31.91■■■□□ 2.7
BEST1-207ENST00000533521 QRICH2Q9H0J4 1663 aa31.91■■■□□ 2.7
BEST1-207ENST00000533521 PLEKHG3A1L390 1219 aa31.9■■■□□ 2.7
BEST1-207ENST00000533521 POLR3AO14802 1390 aaPredicted RBP31.9■■■□□ 2.7
BEST1-207ENST00000533521 ROCK2O75116 1388 aaKnown RBP31.9■■■□□ 2.7
BEST1-207ENST00000533521 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.89■■■□□ 2.7
BEST1-207ENST00000533521 ATRNO75882 1429 aa31.89■■■□□ 2.7
BEST1-207ENST00000533521 BCL9LQ86UU0 1499 aa31.89■■■□□ 2.7
BEST1-207ENST00000533521 ABCA3Q99758 1704 aa31.89■■■□□ 2.69
BEST1-207ENST00000533521 SLIT2O94813 1529 aa31.86■■■□□ 2.69
BEST1-207ENST00000533521 TONSLQ96HA7 1378 aa31.85■■■□□ 2.69
BEST1-207ENST00000533521 NBPF8Q3BBV2 869 aa31.84■■■□□ 2.69
BEST1-207ENST00000533521 LMOD2Q6P5Q4 547 aa31.83■■■□□ 2.69
BEST1-207ENST00000533521 HAP1P54257 671 aaPredicted RBP31.82■■■□□ 2.68
BEST1-207ENST00000533521 NWD2Q9ULI1 1742 aa31.82■■■□□ 2.68
BEST1-207ENST00000533521 ACEP12821 1306 aa31.8■■■□□ 2.68
BEST1-207ENST00000533521 SRPK2P78362 688 aaKnown RBP31.8■■■□□ 2.68
BEST1-207ENST00000533521 UNC5CLQ8IV45 518 aa31.8■■■□□ 2.68
BEST1-207ENST00000533521 CABLES1Q8TDN4 633 aa31.8■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms