RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 MSH6P52701 1360 aa24.59■■□□□ 1.53
NXF1-216ENST00000533499 ATF3P18847 181 aa24.57■■□□□ 1.52
NXF1-216ENST00000533499 NALCNQ8IZF0 1738 aa24.56■■□□□ 1.52
NXF1-216ENST00000533499 ADGRL3Q9HAR2 1447 aa24.56■■□□□ 1.52
NXF1-216ENST00000533499 ST20-MTHFSA0A0A6YYL1 179 aa24.56■■□□□ 1.52
NXF1-216ENST00000533499 EIF4G2P78344 907 aaKnown RBP eCLIP24.56■■□□□ 1.52
NXF1-216ENST00000533499 C19orf44Q9H6X5 657 aa24.56■■□□□ 1.52
NXF1-216ENST00000533499 QRICH2Q9H0J4 1663 aa24.56■■□□□ 1.52
NXF1-216ENST00000533499 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.55■■□□□ 1.52
NXF1-216ENST00000533499 NCOA3Q9Y6Q9 1424 aa24.53■■□□□ 1.52
NXF1-216ENST00000533499 NUTM2FA1L443 756 aa24.53■■□□□ 1.52
NXF1-216ENST00000533499 HSPA5P11021 654 aaKnown RBP24.52■■□□□ 1.52
NXF1-216ENST00000533499 UBAP1LF5GYI3 381 aa24.51■■□□□ 1.51
NXF1-216ENST00000533499 SCAF1Q9H7N4 1312 aaKnown RBP24.5■■□□□ 1.51
NXF1-216ENST00000533499 CADPS2Q86UW7 1296 aa24.49■■□□□ 1.51
NXF1-216ENST00000533499 SRPK2P78362 688 aaKnown RBP24.47■■□□□ 1.51
NXF1-216ENST00000533499 IQSEC2Q5JU85 1478 aa24.46■■□□□ 1.51
NXF1-216ENST00000533499 WASLO00401 505 aaPredicted RBP24.46■■□□□ 1.51
NXF1-216ENST00000533499 TOM1O60784 492 aa24.46■■□□□ 1.51
NXF1-216ENST00000533499 PIP4K2BP78356 416 aa24.46■■□□□ 1.51
NXF1-216ENST00000533499 CDK19Q9BWU1 502 aa24.46■■□□□ 1.51
NXF1-216ENST00000533499 EVC2Q86UK5 1308 aa24.45■■□□□ 1.5
NXF1-216ENST00000533499 CDC42BPGQ6DT37 1551 aa24.44■■□□□ 1.5
NXF1-216ENST00000533499 POLR3GLQ9BT43 218 aa24.43■■□□□ 1.5
NXF1-216ENST00000533499 CABP2Q9NPB3 220 aa24.43■■□□□ 1.5
NXF1-216ENST00000533499 DCCP43146 1447 aa24.43■■□□□ 1.5
NXF1-216ENST00000533499 ADGRB2O60241 1585 aa24.42■■□□□ 1.5
NXF1-216ENST00000533499 TESK2Q96S53 571 aa24.42■■□□□ 1.5
NXF1-216ENST00000533499 SLAIN2Q9P270 581 aa24.42■■□□□ 1.5
NXF1-216ENST00000533499 TMF1P82094 1093 aa24.41■■□□□ 1.5
NXF1-216ENST00000533499 FMN2Q9NZ56 1722 aa24.4■■□□□ 1.5
NXF1-216ENST00000533499 TULP4Q9NRJ4 1543 aa24.4■■□□□ 1.5
NXF1-216ENST00000533499 SBNO2Q9Y2G9 1366 aa24.39■■□□□ 1.49
NXF1-216ENST00000533499 MST1RQ04912 1400 aa24.38■■□□□ 1.49
NXF1-216ENST00000533499 ESCO1Q5FWF5 840 aa24.38■■□□□ 1.49
NXF1-216ENST00000533499 SLC24A1O60721 1099 aa24.37■■□□□ 1.49
NXF1-216ENST00000533499 NUDT16Q96DE0 195 aaKnown RBP24.37■■□□□ 1.49
NXF1-216ENST00000533499 DISP3Q9P2K9 1392 aa24.36■■□□□ 1.49
NXF1-216ENST00000533499 RGPD8O14715 1765 aaPredicted RBP24.35■■□□□ 1.49
NXF1-216ENST00000533499 C1orf167Q5SNV9 1468 aa24.35■■□□□ 1.49
NXF1-216ENST00000533499 ORAI2Q96SN7 254 aa24.35■■□□□ 1.49
NXF1-216ENST00000533499 PRR36Q9H6K5 1346 aa24.35■■□□□ 1.49
NXF1-216ENST00000533499 TMC1Q8TDI8 760 aa24.33■■□□□ 1.49
NXF1-216ENST00000533499 CDCA8Q53HL2 280 aa24.32■■□□□ 1.48
NXF1-216ENST00000533499 PMFBP1Q8TBY8 1022 aa24.32■■□□□ 1.48
NXF1-216ENST00000533499 ANKARQ7Z5J8 1434 aa24.31■■□□□ 1.48
NXF1-216ENST00000533499 PHF8Q9UPP1 1060 aa24.3■■□□□ 1.48
NXF1-216ENST00000533499 USP32Q8NFA0 1604 aa24.3■■□□□ 1.48
NXF1-216ENST00000533499 BRINP3Q76B58 766 aa24.29■■□□□ 1.48
NXF1-216ENST00000533499 CCDC61Q9Y6R9 512 aa24.29■■□□□ 1.48
NXF1-216ENST00000533499 ATP7BP35670 1465 aa24.29■■□□□ 1.48
NXF1-216ENST00000533499 ROBO1Q9Y6N7 1651 aa24.28■■□□□ 1.48
NXF1-216ENST00000533499 ATAD2Q6PL18 1390 aa24.28■■□□□ 1.48
NXF1-216ENST00000533499 PPIP5K1Q6PFW1 1433 aa24.27■■□□□ 1.48
NXF1-216ENST00000533499 NGDNQ8NEJ9 315 aaKnown RBP24.27■■□□□ 1.48
NXF1-216ENST00000533499 CABP1Q9NZU7 370 aa24.27■■□□□ 1.48
NXF1-216ENST00000533499 ITSN1Q15811 1721 aa24.27■■□□□ 1.48
NXF1-216ENST00000533499 DDX17Q92841 729 aaKnown RBP24.26■■□□□ 1.47
NXF1-216ENST00000533499 C11orf95C9JLR9 678 aaPredicted RBP24.25■■□□□ 1.47
NXF1-216ENST00000533499 FOXO3O43524 673 aa24.25■■□□□ 1.47
NXF1-216ENST00000533499 XPCQ01831 940 aaPredicted RBP24.24■■□□□ 1.47
NXF1-216ENST00000533499 FBXO41Q8TF61 875 aa24.23■■□□□ 1.47
NXF1-216ENST00000533499 SLC12A5Q9H2X9 1139 aa24.22■■□□□ 1.47
NXF1-216ENST00000533499 PSME1Q06323 249 aa24.21■■□□□ 1.47
NXF1-216ENST00000533499 PUS7Q96PZ0 661 aaKnown RBP24.21■■□□□ 1.47
NXF1-216ENST00000533499 KIF1AQ12756 1690 aa24.21■■□□□ 1.47
NXF1-216ENST00000533499 TOPAZ1Q8N9V7 1692 aa24.21■■□□□ 1.47
NXF1-216ENST00000533499 ACEP12821 1306 aa24.2■■□□□ 1.46
NXF1-216ENST00000533499 KIF7Q2M1P5 1343 aa24.2■■□□□ 1.46
NXF1-216ENST00000533499 NPHP3Q7Z494 1330 aa24.18■■□□□ 1.46
NXF1-216ENST00000533499 PLEKHG3A1L390 1219 aa24.18■■□□□ 1.46
NXF1-216ENST00000533499 KRT28Q7Z3Y7 464 aa24.17■■□□□ 1.46
NXF1-216ENST00000533499 HDGFL2Q7Z4V5 671 aaPredicted RBP24.17■■□□□ 1.46
NXF1-216ENST00000533499 CCDC7Q96M83 1385 aa24.16■■□□□ 1.46
NXF1-216ENST00000533499 WASHC2AQ641Q2 1341 aa24.15■■□□□ 1.46
NXF1-216ENST00000533499 PAK3O75914 559 aaPredicted RBP24.15■■□□□ 1.46
NXF1-216ENST00000533499 TERF2IPQ9NYB0 399 aa24.15■■□□□ 1.46
NXF1-216ENST00000533499 PHLPP1O60346 1717 aa24.15■■□□□ 1.46
NXF1-216ENST00000533499 HSPA1LP34931 641 aa24.14■■□□□ 1.45
NXF1-216ENST00000533499 LMOD2Q6P5Q4 547 aa24.14■■□□□ 1.45
NXF1-216ENST00000533499 PLEKHG5O94827 1062 aa24.13■■□□□ 1.45
NXF1-216ENST00000533499 NHSL1Q5SYE7 1610 aa24.12■■□□□ 1.45
NXF1-216ENST00000533499 NINLQ9Y2I6 1382 aa24.12■■□□□ 1.45
NXF1-216ENST00000533499 KTN1Q86UP2 1357 aaKnown RBP24.11■■□□□ 1.45
NXF1-216ENST00000533499 ZNF316A6NFI3 1004 aaPredicted RBP24.1■■□□□ 1.45
NXF1-216ENST00000533499 POLR3AO14802 1390 aaPredicted RBP24.1■■□□□ 1.45
NXF1-216ENST00000533499 AHDC1Q5TGY3 1603 aaPredicted RBP24.1■■□□□ 1.45
NXF1-216ENST00000533499 MYOM1P52179 1685 aa24.09■■□□□ 1.45
NXF1-216ENST00000533499 ZNF692Q9BU19 519 aaPredicted RBP24.09■■□□□ 1.45
NXF1-216ENST00000533499 A0A1W2PP64 1363 aa24.08■■□□□ 1.45
NXF1-216ENST00000533499 AKAP12Q02952 1782 aa24.07■■□□□ 1.44
NXF1-216ENST00000533499 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.07■■□□□ 1.44
NXF1-216ENST00000533499 PANK3Q9H999 370 aa24.07■■□□□ 1.44
NXF1-216ENST00000533499 SOS2Q07890 1332 aaPredicted RBP24.07■■□□□ 1.44
NXF1-216ENST00000533499 PXDNQ92626 1479 aa24.07■■□□□ 1.44
NXF1-216ENST00000533499 LRRC59Q96AG4 307 aaKnown RBP24.06■■□□□ 1.44
NXF1-216ENST00000533499 ANKRD36BQ8N2N9 1353 aa24.05■■□□□ 1.44
NXF1-216ENST00000533499 USP6P35125 1406 aa24.05■■□□□ 1.44
NXF1-216ENST00000533499 CD163L1Q9NR16 1453 aa24.05■■□□□ 1.44
NXF1-216ENST00000533499 CPSF1Q10570 1443 aaKnown RBP24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms