RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 NSD3Q9BZ95 1437 aa18.89■□□□□ 0.62
PCDHA3-202ENST00000532566 NLRP6P59044 892 aa18.89■□□□□ 0.61
PCDHA3-202ENST00000532566 TAF7LQ5H9L4 462 aa18.89■□□□□ 0.61
PCDHA3-202ENST00000532566 CD109Q6YHK3 1445 aa18.89■□□□□ 0.61
PCDHA3-202ENST00000532566 NINLQ9Y2I6 1382 aa18.89■□□□□ 0.61
PCDHA3-202ENST00000532566 HTATSF1O43719 755 aaKnown RBP18.88■□□□□ 0.61
PCDHA3-202ENST00000532566 CT47B1P0C2W7 299 aaPredicted RBP18.88■□□□□ 0.61
PCDHA3-202ENST00000532566 C22orf23Q9BZE7 217 aa18.88■□□□□ 0.61
PCDHA3-202ENST00000532566 SLFN5Q08AF3 891 aa18.88■□□□□ 0.61
PCDHA3-202ENST00000532566 BACH2Q9BYV9 841 aa18.87■□□□□ 0.61
PCDHA3-202ENST00000532566 C9orf78Q9NZ63 289 aaPredicted RBP18.87■□□□□ 0.61
PCDHA3-202ENST00000532566 CHMP5Q9NZZ3 219 aa18.87■□□□□ 0.61
PCDHA3-202ENST00000532566 PDZRN3Q9UPQ7 1066 aa18.86■□□□□ 0.61
PCDHA3-202ENST00000532566 ITSN2Q9NZM3 1697 aa18.86■□□□□ 0.61
PCDHA3-202ENST00000532566 ADAMTS12P58397 1594 aa18.86■□□□□ 0.61
PCDHA3-202ENST00000532566 NEXNQ0ZGT2 675 aa18.86■□□□□ 0.61
PCDHA3-202ENST00000532566 ZNF692Q9BU19 519 aaPredicted RBP18.86■□□□□ 0.61
PCDHA3-202ENST00000532566 ADGRF5Q8IZF2 1346 aa18.86■□□□□ 0.61
PCDHA3-202ENST00000532566 WWC1Q8IX03 1113 aa18.85■□□□□ 0.61
PCDHA3-202ENST00000532566 RTEL1-TNFRSF6BF6WH68 1400 aa18.85■□□□□ 0.61
PCDHA3-202ENST00000532566 CDK11BP21127 795 aaKnown RBP18.84■□□□□ 0.61
PCDHA3-202ENST00000532566 GNL2Q13823 731 aaKnown RBP18.84■□□□□ 0.61
PCDHA3-202ENST00000532566 TWISTNBQ3B726 338 aaPredicted RBP18.84■□□□□ 0.61
PCDHA3-202ENST00000532566 WDR62O43379 1518 aa18.84■□□□□ 0.61
PCDHA3-202ENST00000532566 DDX49Q9Y6V7 483 aaKnown RBP18.84■□□□□ 0.61
PCDHA3-202ENST00000532566 SCAF11Q99590 1463 aaKnown RBP18.83■□□□□ 0.61
PCDHA3-202ENST00000532566 CSPP1Q1MSJ5 1256 aa18.83■□□□□ 0.61
PCDHA3-202ENST00000532566 DRC7Q8IY82 874 aa18.83■□□□□ 0.61
PCDHA3-202ENST00000532566 KIAA0556O60303 1618 aa18.83■□□□□ 0.6
PCDHA3-202ENST00000532566 CHAF1AQ13111 956 aaPredicted RBP18.83■□□□□ 0.6
PCDHA3-202ENST00000532566 INTS3Q68E01 1043 aaKnown RBP18.83■□□□□ 0.6
PCDHA3-202ENST00000532566 SKOR2Q2VWA4 1001 aaPredicted RBP18.83■□□□□ 0.6
PCDHA3-202ENST00000532566 NUTM2GQ5VZR2 741 aa18.83■□□□□ 0.6
PCDHA3-202ENST00000532566 TTC5Q8N0Z6 440 aa18.82■□□□□ 0.6
PCDHA3-202ENST00000532566 DIAPH3Q9NSV4 1193 aa18.82■□□□□ 0.6
PCDHA3-202ENST00000532566 HSP90B1P14625 803 aaKnown RBP18.82■□□□□ 0.6
PCDHA3-202ENST00000532566 GAS2L2Q8NHY3 880 aa18.82■□□□□ 0.6
PCDHA3-202ENST00000532566 FANCAO15360 1455 aa18.82■□□□□ 0.6
PCDHA3-202ENST00000532566 FAM135AQ9P2D6 1515 aa18.82■□□□□ 0.6
PCDHA3-202ENST00000532566 FOXD4L5Q5VV16 416 aaPredicted RBP18.82■□□□□ 0.6
PCDHA3-202ENST00000532566 FOXD4L4Q8WXT5 416 aaPredicted RBP18.82■□□□□ 0.6
PCDHA3-202ENST00000532566 RALGAPBQ86X10 1494 aa18.81■□□□□ 0.6
PCDHA3-202ENST00000532566 NOB1Q9ULX3 412 aaKnown RBP18.81■□□□□ 0.6
PCDHA3-202ENST00000532566 DDX58O95786 925 aaKnown RBP18.81■□□□□ 0.6
PCDHA3-202ENST00000532566 ATF7IPQ6VMQ6 1270 aa18.81■□□□□ 0.6
PCDHA3-202ENST00000532566 NFKBIBQ15653 356 aa18.8■□□□□ 0.6
PCDHA3-202ENST00000532566 RUFY2Q8WXA3 655 aa18.8■□□□□ 0.6
PCDHA3-202ENST00000532566 KIAA2012Q0VF49 1180 aa18.8■□□□□ 0.6
PCDHA3-202ENST00000532566 DISP3Q9P2K9 1392 aa18.8■□□□□ 0.6
PCDHA3-202ENST00000532566 SULT6B1Q6IMI4 303 aa18.8■□□□□ 0.6
PCDHA3-202ENST00000532566 DHX29Q7Z478 1369 aaKnown RBP18.79■□□□□ 0.6
PCDHA3-202ENST00000532566 MVPQ14764 893 aaKnown RBP18.79■□□□□ 0.6
PCDHA3-202ENST00000532566 CDC45O75419 566 aa18.79■□□□□ 0.6
PCDHA3-202ENST00000532566 FCHSD2O94868 740 aa18.79■□□□□ 0.6
PCDHA3-202ENST00000532566 ANO2Q9NQ90 1003 aa18.79■□□□□ 0.6
PCDHA3-202ENST00000532566 ABTB2Q8N961 1025 aa18.78■□□□□ 0.6
PCDHA3-202ENST00000532566 PHF14O94880 888 aa18.77■□□□□ 0.6
PCDHA3-202ENST00000532566 TMPOP42166 694 aaKnown RBP18.77■□□□□ 0.6
PCDHA3-202ENST00000532566 HSP90AB4PQ58FF6 505 aa18.77■□□□□ 0.6
PCDHA3-202ENST00000532566 PLCH2O75038 1416 aa18.77■□□□□ 0.6
PCDHA3-202ENST00000532566 IFIT2P09913 472 aaKnown RBP18.77■□□□□ 0.6
PCDHA3-202ENST00000532566 THEMISQ8N1K5 641 aaPredicted RBP18.77■□□□□ 0.6
PCDHA3-202ENST00000532566 RAPGEF4Q8WZA2 1011 aa18.77■□□□□ 0.6
PCDHA3-202ENST00000532566 GCC1Q96CN9 775 aa18.77■□□□□ 0.59
PCDHA3-202ENST00000532566 KIF3AQ9Y496 699 aa18.77■□□□□ 0.59
PCDHA3-202ENST00000532566 CCDC61Q9Y6R9 512 aa18.77■□□□□ 0.59
PCDHA3-202ENST00000532566 GNAI3P08754 354 aa18.76■□□□□ 0.59
PCDHA3-202ENST00000532566 IDI1Q13907 227 aa18.76■□□□□ 0.59
PCDHA3-202ENST00000532566 ATP6V1DQ9Y5K8 247 aa18.76■□□□□ 0.59
PCDHA3-202ENST00000532566 UBTFL1P0CB47 393 aaPredicted RBP18.75■□□□□ 0.59
PCDHA3-202ENST00000532566 CCDC30Q5VVM6 783 aa18.75■□□□□ 0.59
PCDHA3-202ENST00000532566 ZNF428Q96B54 188 aa18.75■□□□□ 0.59
PCDHA3-202ENST00000532566 ZKSCAN1P17029 563 aaPredicted RBP18.74■□□□□ 0.59
PCDHA3-202ENST00000532566 CCDC9Q9Y3X0 531 aaKnown RBP18.74■□□□□ 0.59
PCDHA3-202ENST00000532566 NOS1P29475 1434 aa18.74■□□□□ 0.59
PCDHA3-202ENST00000532566 GPRASP1Q5JY77 1395 aa18.74■□□□□ 0.59
PCDHA3-202ENST00000532566 SYCP2Q9BX26 1530 aa18.74■□□□□ 0.59
PCDHA3-202ENST00000532566 SLC26A8Q96RN1 970 aa18.74■□□□□ 0.59
PCDHA3-202ENST00000532566 C1orf115Q9H7X2 142 aa18.74■□□□□ 0.59
PCDHA3-202ENST00000532566 DUOX2Q9NRD8 1548 aa18.74■□□□□ 0.59
PCDHA3-202ENST00000532566 G3BP1Q13283 466 aaKnown RBP eCLIP18.73■□□□□ 0.59
PCDHA3-202ENST00000532566 C14orf93Q9H972 538 aaKnown RBP18.73■□□□□ 0.59
PCDHA3-202ENST00000532566 PRAG1Q86YV5 1406 aa18.72■□□□□ 0.59
PCDHA3-202ENST00000532566 C20orf194Q5TEA3 1177 aa18.72■□□□□ 0.59
PCDHA3-202ENST00000532566 EVA1CP58658 441 aa18.72■□□□□ 0.59
PCDHA3-202ENST00000532566 NUDT16Q96DE0 195 aaKnown RBP18.72■□□□□ 0.59
PCDHA3-202ENST00000532566 KDM5BQ9UGL1 1544 aa18.72■□□□□ 0.59
PCDHA3-202ENST00000532566 NUCB2P80303 420 aa18.72■□□□□ 0.59
PCDHA3-202ENST00000532566 RRS1Q15050 365 aaKnown RBP18.72■□□□□ 0.59
PCDHA3-202ENST00000532566 NFE2L2Q16236 605 aa18.72■□□□□ 0.59
PCDHA3-202ENST00000532566 NKTRP30414 1462 aaKnown RBP18.71■□□□□ 0.59
PCDHA3-202ENST00000532566 NLRP2Q9NX02 1062 aa18.71■□□□□ 0.59
PCDHA3-202ENST00000532566 DUSP27Q5VZP5 1158 aa18.71■□□□□ 0.59
PCDHA3-202ENST00000532566 NUP160Q12769 1436 aa18.71■□□□□ 0.59
PCDHA3-202ENST00000532566 ATF3P18847 181 aa18.71■□□□□ 0.59
PCDHA3-202ENST00000532566 FOXD4L6Q3SYB3 417 aaPredicted RBP18.71■□□□□ 0.59
PCDHA3-202ENST00000532566 FOXD4L3Q6VB84 417 aaPredicted RBP18.71■□□□□ 0.59
PCDHA3-202ENST00000532566 WAPLQ7Z5K2 1190 aa18.7■□□□□ 0.58
PCDHA3-202ENST00000532566 KIF21AQ7Z4S6 1674 aa18.7■□□□□ 0.58
PCDHA3-202ENST00000532566 SLC4A2P04920 1241 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms