RNA–Protein interactions for RNA: ENST00000532443.1

PPFIA1-221, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 4

Gene PPFIA1, Length 587 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-221ENST00000532443 USP46P62068 366 aa9.13□□□□□ -0.95
PPFIA1-221ENST00000532443 TOP2AP11388 1531 aaKnown RBP9.12□□□□□ -0.95
PPFIA1-221ENST00000532443 FMNL1O95466 1100 aaPredicted RBP9.12□□□□□ -0.95
PPFIA1-221ENST00000532443 GGCXP38435 758 aa9.12□□□□□ -0.95
PPFIA1-221ENST00000532443 THAP11Q96EK4 314 aa9.12□□□□□ -0.95
PPFIA1-221ENST00000532443 SLC6A16Q9GZN6 736 aa9.12□□□□□ -0.95
PPFIA1-221ENST00000532443 PRDM9Q9NQV7 894 aa9.12□□□□□ -0.95
PPFIA1-221ENST00000532443 SMARCA2P51531 1590 aa9.12□□□□□ -0.95
PPFIA1-221ENST00000532443 MOXD2PA6NHM9 499 aa9.11□□□□□ -0.95
PPFIA1-221ENST00000532443 PRKCSHP14314 528 aaPredicted RBP9.11□□□□□ -0.95
PPFIA1-221ENST00000532443 SYMPKQ92797 1274 aaKnown RBP9.11□□□□□ -0.95
PPFIA1-221ENST00000532443 TBC1D2Q9BYX2 928 aa9.11□□□□□ -0.95
PPFIA1-221ENST00000532443 RNF223E7ERA6 249 aa9.1□□□□□ -0.95
PPFIA1-221ENST00000532443 BRICD5Q6PL45 260 aa9.1□□□□□ -0.95
PPFIA1-221ENST00000532443 FDX1P10109 184 aa9.09□□□□□ -0.95
PPFIA1-221ENST00000532443 FAM160A2Q8N612 972 aaPredicted RBP9.09□□□□□ -0.95
PPFIA1-221ENST00000532443 KDM4CQ9H3R0 1056 aa9.09□□□□□ -0.95
PPFIA1-221ENST00000532443 ATAD2BQ9ULI0 1458 aa9.08□□□□□ -0.96
PPFIA1-221ENST00000532443 EIF4G1Q04637 1599 aaKnown RBP9.08□□□□□ -0.96
PPFIA1-221ENST00000532443 Q3C1V9 767 aa9.08□□□□□ -0.96
PPFIA1-221ENST00000532443 PCDHGC3Q9UN70 934 aa9.08□□□□□ -0.96
PPFIA1-221ENST00000532443 CSPP1Q1MSJ5 1256 aa9.07□□□□□ -0.96
PPFIA1-221ENST00000532443 PRKD2Q9BZL6 878 aa9.07□□□□□ -0.96
PPFIA1-221ENST00000532443 C6orf229H3BNL8 230 aa9.06□□□□□ -0.96
PPFIA1-221ENST00000532443 NEUROD2Q15784 382 aa9.06□□□□□ -0.96
PPFIA1-221ENST00000532443 BAZ1BQ9UIG0 1483 aaKnown RBP9.05□□□□□ -0.96
PPFIA1-221ENST00000532443 USB1Q9BQ65 265 aaKnown RBP9.05□□□□□ -0.96
PPFIA1-221ENST00000532443 FAM117AQ9C073 453 aa9.04□□□□□ -0.96
PPFIA1-221ENST00000532443 SALL2Q9Y467 1007 aaPredicted RBP9.04□□□□□ -0.96
PPFIA1-221ENST00000532443 NCAPD3P42695 1498 aa9.03□□□□□ -0.96
PPFIA1-221ENST00000532443 RGS20O76081 388 aa9.03□□□□□ -0.96
PPFIA1-221ENST00000532443 PLA2G2CQ5R387 149 aa9.03□□□□□ -0.96
PPFIA1-221ENST00000532443 RSBN1LQ6PCB5 846 aaPredicted RBP9.03□□□□□ -0.96
PPFIA1-221ENST00000532443 FCF1Q9Y324 198 aaKnown RBP9.03□□□□□ -0.96
PPFIA1-221ENST00000532443 PCDHB15Q9Y5E8 787 aa9.03□□□□□ -0.96
PPFIA1-221ENST00000532443 MSS51Q4VC12 460 aa9.02□□□□□ -0.97
PPFIA1-221ENST00000532443 MYSM1Q5VVJ2 828 aa9.02□□□□□ -0.97
PPFIA1-221ENST00000532443 RIC3Q7Z5B4 369 aa9.02□□□□□ -0.97
PPFIA1-221ENST00000532443 ANKLE1Q8NAG6 615 aa9.02□□□□□ -0.97
PPFIA1-221ENST00000532443 POLR3EQ9NVU0 708 aa9.02□□□□□ -0.97
PPFIA1-221ENST00000532443 HMGXB3Q12766 1538 aa9.01□□□□□ -0.97
PPFIA1-221ENST00000532443 DIXDC1Q155Q3 683 aa9.01□□□□□ -0.97
PPFIA1-221ENST00000532443 LIMD1Q9UGP4 676 aa9.01□□□□□ -0.97
PPFIA1-221ENST00000532443 CCDC88BA6NC98 1476 aa9.01□□□□□ -0.97
PPFIA1-221ENST00000532443 SPTLC1O15269 473 aa9□□□□□ -0.97
PPFIA1-221ENST00000532443 SLC19A1P41440 591 aa9□□□□□ -0.97
PPFIA1-221ENST00000532443 RETREG3Q86VR2 466 aa9□□□□□ -0.97
PPFIA1-221ENST00000532443 CABLES1Q8TDN4 633 aa9□□□□□ -0.97
PPFIA1-221ENST00000532443 EMID1Q96A84 441 aaPredicted RBP9□□□□□ -0.97
PPFIA1-221ENST00000532443 ATP1B4Q9UN42 357 aaPredicted RBP9□□□□□ -0.97
PPFIA1-221ENST00000532443 BRPF1P55201 1214 aaPredicted RBP8.99□□□□□ -0.97
PPFIA1-221ENST00000532443 LIAT1Q6ZQX7 453 aa8.99□□□□□ -0.97
PPFIA1-221ENST00000532443 CCDC24Q8N4L8 307 aa8.99□□□□□ -0.97
PPFIA1-221ENST00000532443 MTMR2Q13614 643 aa8.98□□□□□ -0.97
PPFIA1-221ENST00000532443 PLEKHG3A1L390 1219 aa8.97□□□□□ -0.97
PPFIA1-221ENST00000532443 DXOO77932 396 aaKnown RBP8.97□□□□□ -0.97
PPFIA1-221ENST00000532443 JUNDP17535 347 aa8.97□□□□□ -0.97
PPFIA1-221ENST00000532443 CLK2P49760 499 aaKnown RBP8.97□□□□□ -0.97
PPFIA1-221ENST00000532443 QPCTQ16769 361 aa8.97□□□□□ -0.97
PPFIA1-221ENST00000532443 PRR7Q8TB68 274 aa8.97□□□□□ -0.97
PPFIA1-221ENST00000532443 DDRGK1Q96HY6 314 aa8.97□□□□□ -0.97
PPFIA1-221ENST00000532443 HRCP23327 699 aa8.96□□□□□ -0.98
PPFIA1-221ENST00000532443 MMP16P51512 607 aa8.96□□□□□ -0.98
PPFIA1-221ENST00000532443 IL27Q8NEV9 243 aa8.96□□□□□ -0.98
PPFIA1-221ENST00000532443 V9GY48 417 aaPredicted RBP8.96□□□□□ -0.98
PPFIA1-221ENST00000532443 NUTM2BA6NNL0 878 aaPredicted RBP8.95□□□□□ -0.98
PPFIA1-221ENST00000532443 NUTM2EB1AL46 878 aaPredicted RBP8.95□□□□□ -0.98
PPFIA1-221ENST00000532443 NUTM2DQ5VT03 806 aaPredicted RBP8.95□□□□□ -0.98
PPFIA1-221ENST00000532443 NUTM2AQ8IVF1 878 aaPredicted RBP8.95□□□□□ -0.98
PPFIA1-221ENST00000532443 TSC1Q92574 1164 aa8.95□□□□□ -0.98
PPFIA1-221ENST00000532443 IRX2Q9BZI1 471 aaPredicted RBP8.95□□□□□ -0.98
PPFIA1-221ENST00000532443 RSPH6AQ9H0K4 717 aa8.95□□□□□ -0.98
PPFIA1-221ENST00000532443 ZBTB3Q9H5J0 574 aa8.95□□□□□ -0.98
PPFIA1-221ENST00000532443 CFAP99D6REC4 459 aa8.94□□□□□ -0.98
PPFIA1-221ENST00000532443 CC2D2AQ9P2K1 1620 aa8.94□□□□□ -0.98
PPFIA1-221ENST00000532443 GJA5P36382 358 aa8.93□□□□□ -0.98
PPFIA1-221ENST00000532443 SPRYD7Q5W111 196 aa8.93□□□□□ -0.98
PPFIA1-221ENST00000532443 PROCA1Q8NCQ7 364 aaPredicted RBP8.93□□□□□ -0.98
PPFIA1-221ENST00000532443 SH3D19Q5HYK7 790 aa8.92□□□□□ -0.98
PPFIA1-221ENST00000532443 ZNF697Q5TEC3 545 aa8.92□□□□□ -0.98
PPFIA1-221ENST00000532443 NUDT12Q9BQG2 462 aa8.92□□□□□ -0.98
PPFIA1-221ENST00000532443 SPDYE5A6NIY4 337 aa8.91□□□□□ -0.98
PPFIA1-221ENST00000532443 ZBTB24O43167 697 aaPredicted RBP8.91□□□□□ -0.98
PPFIA1-221ENST00000532443 RTL5Q5HYW3 569 aaPredicted RBP8.91□□□□□ -0.98
PPFIA1-221ENST00000532443 GFRA3O60609 400 aa8.9□□□□□ -0.98
PPFIA1-221ENST00000532443 FOXC1Q12948 553 aa8.9□□□□□ -0.98
PPFIA1-221ENST00000532443 PRPF38BQ5VTL8 546 aaKnown RBP8.9□□□□□ -0.98
PPFIA1-221ENST00000532443 TNFRSF10AO00220 468 aa8.89□□□□□ -0.99
PPFIA1-221ENST00000532443 LILRB3O75022 631 aa8.89□□□□□ -0.99
PPFIA1-221ENST00000532443 SKIV2LQ15477 1246 aaKnown RBP8.89□□□□□ -0.99
PPFIA1-221ENST00000532443 FBXO31Q5XUX0 539 aaPredicted RBP8.89□□□□□ -0.99
PPFIA1-221ENST00000532443 ZNF598Q86UK7 904 aaKnown RBP8.89□□□□□ -0.99
PPFIA1-221ENST00000532443 PDZRN3Q9UPQ7 1066 aa8.89□□□□□ -0.99
PPFIA1-221ENST00000532443 CCNYL3P0C7X3 344 aa8.88□□□□□ -0.99
PPFIA1-221ENST00000532443 RPIAP49247 311 aa8.88□□□□□ -0.99
PPFIA1-221ENST00000532443 PTCRAQ6ISU1 281 aaPredicted RBP8.88□□□□□ -0.99
PPFIA1-221ENST00000532443 CD2BP2O95400 341 aaKnown RBP8.87□□□□□ -0.99
PPFIA1-221ENST00000532443 CTHP32929 405 aa8.87□□□□□ -0.99
PPFIA1-221ENST00000532443 TRIM32Q13049 653 aa8.87□□□□□ -0.99
PPFIA1-221ENST00000532443 PER1O15534 1290 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms