RNA–Protein interactions for RNA: ENST00000531590.1

LRFN4-203, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 3

Gene LRFN4, Length 274 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-203ENST00000531590 ILDR1Q86SU0 546 aaPredicted RBP23.17■■□□□ 1.3
LRFN4-203ENST00000531590 ARHGEF28Q8N1W1 1705 aaKnown RBP23.16■■□□□ 1.3
LRFN4-203ENST00000531590 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.16■■□□□ 1.3
LRFN4-203ENST00000531590 DCCP43146 1447 aa23.16■■□□□ 1.3
LRFN4-203ENST00000531590 CENPJQ9HC77 1338 aaPredicted RBP23.14■■□□□ 1.3
LRFN4-203ENST00000531590 TOM1O60784 492 aa23.14■■□□□ 1.29
LRFN4-203ENST00000531590 ATF3P18847 181 aa23.14■■□□□ 1.29
LRFN4-203ENST00000531590 CADPS2Q86UW7 1296 aa23.14■■□□□ 1.29
LRFN4-203ENST00000531590 HIRIP3Q9BW71 556 aaPredicted RBP23.14■■□□□ 1.29
LRFN4-203ENST00000531590 MINK1Q8N4C8 1332 aaPredicted RBP23.13■■□□□ 1.29
LRFN4-203ENST00000531590 EIF3AQ14152 1382 aaKnown RBP23.11■■□□□ 1.29
LRFN4-203ENST00000531590 CDC42BPGQ6DT37 1551 aa23.1■■□□□ 1.29
LRFN4-203ENST00000531590 MST1RQ04912 1400 aa23.1■■□□□ 1.29
LRFN4-203ENST00000531590 FBXO41Q8TF61 875 aa23.1■■□□□ 1.29
LRFN4-203ENST00000531590 PIP4K2BP78356 416 aa23.09■■□□□ 1.29
LRFN4-203ENST00000531590 SLAIN2Q9P270 581 aa23.09■■□□□ 1.29
LRFN4-203ENST00000531590 USP47Q96K76 1375 aa23.08■■□□□ 1.29
LRFN4-203ENST00000531590 ADGRB2O60241 1585 aa23.08■■□□□ 1.29
LRFN4-203ENST00000531590 C1orf167Q5SNV9 1468 aa23.05■■□□□ 1.28
LRFN4-203ENST00000531590 ST20-MTHFSA0A0A6YYL1 179 aa23.05■■□□□ 1.28
LRFN4-203ENST00000531590 NUTM2FA1L443 756 aa23.05■■□□□ 1.28
LRFN4-203ENST00000531590 WASLO00401 505 aaPredicted RBP23.05■■□□□ 1.28
LRFN4-203ENST00000531590 SCAF1Q9H7N4 1312 aaKnown RBP23.05■■□□□ 1.28
LRFN4-203ENST00000531590 SBNO2Q9Y2G9 1366 aa23.01■■□□□ 1.27
LRFN4-203ENST00000531590 QRICH2Q9H0J4 1663 aa23.01■■□□□ 1.27
LRFN4-203ENST00000531590 TESK2Q96S53 571 aa23.01■■□□□ 1.27
LRFN4-203ENST00000531590 CDK19Q9BWU1 502 aa23.01■■□□□ 1.27
LRFN4-203ENST00000531590 TULP4Q9NRJ4 1543 aa23.01■■□□□ 1.27
LRFN4-203ENST00000531590 PRR36Q9H6K5 1346 aa23.01■■□□□ 1.27
LRFN4-203ENST00000531590 BRINP3Q76B58 766 aa23■■□□□ 1.27
LRFN4-203ENST00000531590 ORAI2Q96SN7 254 aa23■■□□□ 1.27
LRFN4-203ENST00000531590 FMN2Q9NZ56 1722 aa22.99■■□□□ 1.27
LRFN4-203ENST00000531590 CABP2Q9NPB3 220 aa22.97■■□□□ 1.27
LRFN4-203ENST00000531590 ANKARQ7Z5J8 1434 aa22.97■■□□□ 1.27
LRFN4-203ENST00000531590 HSPA5P11021 654 aaKnown RBP22.96■■□□□ 1.27
LRFN4-203ENST00000531590 EIF4G2P78344 907 aaKnown RBP eCLIP22.96■■□□□ 1.27
LRFN4-203ENST00000531590 ESCO1Q5FWF5 840 aa22.96■■□□□ 1.27
LRFN4-203ENST00000531590 ATP7BP35670 1465 aa22.96■■□□□ 1.27
LRFN4-203ENST00000531590 ROBO1Q9Y6N7 1651 aa22.96■■□□□ 1.27
LRFN4-203ENST00000531590 SRPK2P78362 688 aaKnown RBP22.95■■□□□ 1.26
LRFN4-203ENST00000531590 EVC2Q86UK5 1308 aa22.95■■□□□ 1.26
LRFN4-203ENST00000531590 USP32Q8NFA0 1604 aa22.95■■□□□ 1.26
LRFN4-203ENST00000531590 NUDT16Q96DE0 195 aaKnown RBP22.94■■□□□ 1.26
LRFN4-203ENST00000531590 DDX17Q92841 729 aaKnown RBP22.92■■□□□ 1.26
LRFN4-203ENST00000531590 HSPA1LP34931 641 aa22.91■■□□□ 1.26
LRFN4-203ENST00000531590 DISP3Q9P2K9 1392 aa22.9■■□□□ 1.26
LRFN4-203ENST00000531590 PHF8Q9UPP1 1060 aa22.9■■□□□ 1.26
LRFN4-203ENST00000531590 ZEB1P37275 1124 aaPredicted RBP22.89■■□□□ 1.25
LRFN4-203ENST00000531590 PMFBP1Q8TBY8 1022 aa22.89■■□□□ 1.25
LRFN4-203ENST00000531590 CCDC61Q9Y6R9 512 aa22.88■■□□□ 1.25
LRFN4-203ENST00000531590 AHDC1Q5TGY3 1603 aaPredicted RBP22.86■■□□□ 1.25
LRFN4-203ENST00000531590 FOXO3O43524 673 aa22.86■■□□□ 1.25
LRFN4-203ENST00000531590 TMF1P82094 1093 aa22.86■■□□□ 1.25
LRFN4-203ENST00000531590 PPIP5K1Q6PFW1 1433 aa22.84■■□□□ 1.25
LRFN4-203ENST00000531590 SLC24A1O60721 1099 aa22.84■■□□□ 1.25
LRFN4-203ENST00000531590 ATAD2Q6PL18 1390 aa22.84■■□□□ 1.25
LRFN4-203ENST00000531590 PLEKHG3A1L390 1219 aa22.83■■□□□ 1.25
LRFN4-203ENST00000531590 XPCQ01831 940 aaPredicted RBP22.83■■□□□ 1.25
LRFN4-203ENST00000531590 NPHP3Q7Z494 1330 aa22.82■■□□□ 1.24
LRFN4-203ENST00000531590 TOPAZ1Q8N9V7 1692 aa22.82■■□□□ 1.24
LRFN4-203ENST00000531590 PUS7Q96PZ0 661 aaKnown RBP22.82■■□□□ 1.24
LRFN4-203ENST00000531590 CABP1Q9NZU7 370 aa22.82■■□□□ 1.24
LRFN4-203ENST00000531590 NHSL1Q5SYE7 1610 aa22.82■■□□□ 1.24
LRFN4-203ENST00000531590 SOS2Q07890 1332 aaPredicted RBP22.82■■□□□ 1.24
LRFN4-203ENST00000531590 RGPD8O14715 1765 aaPredicted RBP22.81■■□□□ 1.24
LRFN4-203ENST00000531590 KIF1AQ12756 1690 aa22.81■■□□□ 1.24
LRFN4-203ENST00000531590 PXDNQ92626 1479 aa22.8■■□□□ 1.24
LRFN4-203ENST00000531590 NGDNQ8NEJ9 315 aaKnown RBP22.8■■□□□ 1.24
LRFN4-203ENST00000531590 ACEP12821 1306 aa22.8■■□□□ 1.24
LRFN4-203ENST00000531590 COL16A1Q07092 1604 aaPredicted RBP22.79■■□□□ 1.24
LRFN4-203ENST00000531590 POLR3AO14802 1390 aaPredicted RBP22.79■■□□□ 1.24
LRFN4-203ENST00000531590 C11orf95C9JLR9 678 aaPredicted RBP22.79■■□□□ 1.24
LRFN4-203ENST00000531590 KRT28Q7Z3Y7 464 aa22.78■■□□□ 1.24
LRFN4-203ENST00000531590 SLC12A5Q9H2X9 1139 aa22.77■■□□□ 1.24
LRFN4-203ENST00000531590 PHLPP1O60346 1717 aa22.77■■□□□ 1.23
LRFN4-203ENST00000531590 PSME1Q06323 249 aa22.76■■□□□ 1.23
LRFN4-203ENST00000531590 CDCA8Q53HL2 280 aa22.76■■□□□ 1.23
LRFN4-203ENST00000531590 TMC1Q8TDI8 760 aa22.76■■□□□ 1.23
LRFN4-203ENST00000531590 ITSN1Q15811 1721 aa22.75■■□□□ 1.23
LRFN4-203ENST00000531590 CD163L1Q9NR16 1453 aa22.73■■□□□ 1.23
LRFN4-203ENST00000531590 LRRC59Q96AG4 307 aaKnown RBP22.72■■□□□ 1.23
LRFN4-203ENST00000531590 POLR3GLQ9BT43 218 aa22.72■■□□□ 1.23
LRFN4-203ENST00000531590 CPSF1Q10570 1443 aaKnown RBP22.72■■□□□ 1.23
LRFN4-203ENST00000531590 SBNO1A3KN83 1393 aa22.71■■□□□ 1.23
LRFN4-203ENST00000531590 KIF7Q2M1P5 1343 aa22.7■■□□□ 1.22
LRFN4-203ENST00000531590 SPATA31A3Q5VYP0 1347 aa22.7■■□□□ 1.22
LRFN4-203ENST00000531590 JCADQ9P266 1359 aa22.7■■□□□ 1.22
LRFN4-203ENST00000531590 NINLQ9Y2I6 1382 aa22.7■■□□□ 1.22
LRFN4-203ENST00000531590 USP6P35125 1406 aa22.69■■□□□ 1.22
LRFN4-203ENST00000531590 TNS3Q68CZ2 1445 aa22.68■■□□□ 1.22
LRFN4-203ENST00000531590 A0A1W2PP64 1363 aa22.68■■□□□ 1.22
LRFN4-203ENST00000531590 PNPLA6Q8IY17 1366 aa22.68■■□□□ 1.22
LRFN4-203ENST00000531590 SSH2Q76I76 1423 aa22.67■■□□□ 1.22
LRFN4-203ENST00000531590 PAK3O75914 559 aaPredicted RBP22.66■■□□□ 1.22
LRFN4-203ENST00000531590 ZNF692Q9BU19 519 aaPredicted RBP22.66■■□□□ 1.22
LRFN4-203ENST00000531590 TRPM3Q9HCF6 1732 aaPredicted RBP22.65■■□□□ 1.22
LRFN4-203ENST00000531590 KTN1Q86UP2 1357 aaKnown RBP22.65■■□□□ 1.22
LRFN4-203ENST00000531590 HDGFL2Q7Z4V5 671 aaPredicted RBP22.65■■□□□ 1.22
LRFN4-203ENST00000531590 ANKRD36BQ8N2N9 1353 aa22.64■■□□□ 1.22
LRFN4-203ENST00000531590 WASHC2AQ641Q2 1341 aa22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms