RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 DISP3Q9P2K9 1392 aa26.57■■□□□ 1.84
SMPD1-205ENST00000531303 ZNF335Q9H4Z2 1342 aaPredicted RBP26.57■■□□□ 1.84
SMPD1-205ENST00000531303 PROSER2Q86WR7 435 aaPredicted RBP26.56■■□□□ 1.84
SMPD1-205ENST00000531303 SBNO2Q9Y2G9 1366 aa26.53■■□□□ 1.84
SMPD1-205ENST00000531303 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.53■■□□□ 1.84
SMPD1-205ENST00000531303 KIF7Q2M1P5 1343 aa26.53■■□□□ 1.84
SMPD1-205ENST00000531303 WASHC2AQ641Q2 1341 aa26.53■■□□□ 1.84
SMPD1-205ENST00000531303 EVC2Q86UK5 1308 aa26.51■■□□□ 1.83
SMPD1-205ENST00000531303 CCDC7Q96M83 1385 aa26.51■■□□□ 1.83
SMPD1-205ENST00000531303 NKTRP30414 1462 aaKnown RBP26.5■■□□□ 1.83
SMPD1-205ENST00000531303 SLC24A1O60721 1099 aa26.5■■□□□ 1.83
SMPD1-205ENST00000531303 C14orf37Q86TY3 774 aa26.5■■□□□ 1.83
SMPD1-205ENST00000531303 TULP4Q9NRJ4 1543 aa26.49■■□□□ 1.83
SMPD1-205ENST00000531303 CABP2Q9NPB3 220 aa26.48■■□□□ 1.83
SMPD1-205ENST00000531303 SRPK2P78362 688 aaKnown RBP26.47■■□□□ 1.83
SMPD1-205ENST00000531303 CDK19Q9BWU1 502 aa26.47■■□□□ 1.83
SMPD1-205ENST00000531303 CDCA8Q53HL2 280 aa26.46■■□□□ 1.83
SMPD1-205ENST00000531303 TMEM94Q12767 1356 aa26.44■■□□□ 1.82
SMPD1-205ENST00000531303 WASLO00401 505 aaPredicted RBP26.44■■□□□ 1.82
SMPD1-205ENST00000531303 DDX10Q13206 875 aaKnown RBP26.43■■□□□ 1.82
SMPD1-205ENST00000531303 NALCNQ8IZF0 1738 aa26.43■■□□□ 1.82
SMPD1-205ENST00000531303 NUTM2FA1L443 756 aa26.41■■□□□ 1.82
SMPD1-205ENST00000531303 ADGRB2O60241 1585 aa26.4■■□□□ 1.82
SMPD1-205ENST00000531303 ADGRL3Q9HAR2 1447 aa26.39■■□□□ 1.81
SMPD1-205ENST00000531303 LRRC7Q96NW7 1537 aa26.39■■□□□ 1.81
SMPD1-205ENST00000531303 TMC1Q8TDI8 760 aa26.37■■□□□ 1.81
SMPD1-205ENST00000531303 XIRP1Q702N8 1843 aaKnown RBP26.37■■□□□ 1.81
SMPD1-205ENST00000531303 NUDT16Q96DE0 195 aaKnown RBP26.34■■□□□ 1.81
SMPD1-205ENST00000531303 C19orf44Q9H6X5 657 aa26.34■■□□□ 1.81
SMPD1-205ENST00000531303 PUS7Q96PZ0 661 aaKnown RBP26.33■■□□□ 1.81
SMPD1-205ENST00000531303 NCOA3Q9Y6Q9 1424 aa26.32■■□□□ 1.8
SMPD1-205ENST00000531303 CDC42BPGQ6DT37 1551 aa26.32■■□□□ 1.8
SMPD1-205ENST00000531303 ATAD2Q6PL18 1390 aa26.31■■□□□ 1.8
SMPD1-205ENST00000531303 MYOM1P52179 1685 aa26.31■■□□□ 1.8
SMPD1-205ENST00000531303 SLC12A5Q9H2X9 1139 aa26.31■■□□□ 1.8
SMPD1-205ENST00000531303 FMN2Q9NZ56 1722 aa26.31■■□□□ 1.8
SMPD1-205ENST00000531303 PRR36Q9H6K5 1346 aa26.31■■□□□ 1.8
SMPD1-205ENST00000531303 LTBP4Q8N2S1 1624 aa26.31■■□□□ 1.8
SMPD1-205ENST00000531303 RGPD8O14715 1765 aaPredicted RBP26.31■■□□□ 1.8
SMPD1-205ENST00000531303 MSH6P52701 1360 aa26.31■■□□□ 1.8
SMPD1-205ENST00000531303 ATF3P18847 181 aa26.3■■□□□ 1.8
SMPD1-205ENST00000531303 CABP1Q9NZU7 370 aa26.29■■□□□ 1.8
SMPD1-205ENST00000531303 ATP7BP35670 1465 aa26.27■■□□□ 1.8
SMPD1-205ENST00000531303 PANK3Q9H999 370 aa26.27■■□□□ 1.8
SMPD1-205ENST00000531303 CCDC61Q9Y6R9 512 aa26.27■■□□□ 1.8
SMPD1-205ENST00000531303 USP32Q8NFA0 1604 aa26.27■■□□□ 1.8
SMPD1-205ENST00000531303 PPIP5K1Q6PFW1 1433 aa26.26■■□□□ 1.79
SMPD1-205ENST00000531303 DIEXFQ68CQ4 756 aaKnown RBP26.24■■□□□ 1.79
SMPD1-205ENST00000531303 ANKARQ7Z5J8 1434 aa26.23■■□□□ 1.79
SMPD1-205ENST00000531303 CADPS2Q86UW7 1296 aa26.23■■□□□ 1.79
SMPD1-205ENST00000531303 PMFBP1Q8TBY8 1022 aa26.22■■□□□ 1.79
SMPD1-205ENST00000531303 DCCP43146 1447 aa26.21■■□□□ 1.79
SMPD1-205ENST00000531303 ITSN1Q15811 1721 aa26.21■■□□□ 1.79
SMPD1-205ENST00000531303 TOPAZ1Q8N9V7 1692 aa26.21■■□□□ 1.79
SMPD1-205ENST00000531303 NINLQ9Y2I6 1382 aa26.2■■□□□ 1.79
SMPD1-205ENST00000531303 ESCO1Q5FWF5 840 aa26.2■■□□□ 1.78
SMPD1-205ENST00000531303 CNGB1Q14028 1251 aaPredicted RBP26.18■■□□□ 1.78
SMPD1-205ENST00000531303 TERF2IPQ9NYB0 399 aa26.18■■□□□ 1.78
SMPD1-205ENST00000531303 HDGFL2Q7Z4V5 671 aaPredicted RBP26.17■■□□□ 1.78
SMPD1-205ENST00000531303 ORAI2Q96SN7 254 aa26.17■■□□□ 1.78
SMPD1-205ENST00000531303 MST1RQ04912 1400 aa26.17■■□□□ 1.78
SMPD1-205ENST00000531303 C1orf167Q5SNV9 1468 aa26.17■■□□□ 1.78
SMPD1-205ENST00000531303 ANKRD36BQ8N2N9 1353 aa26.16■■□□□ 1.78
SMPD1-205ENST00000531303 PLEKHG3A1L390 1219 aa26.16■■□□□ 1.78
SMPD1-205ENST00000531303 NGDNQ8NEJ9 315 aaKnown RBP26.16■■□□□ 1.78
SMPD1-205ENST00000531303 CARD14Q9BXL6 1004 aa26.16■■□□□ 1.78
SMPD1-205ENST00000531303 PHF8Q9UPP1 1060 aa26.16■■□□□ 1.78
SMPD1-205ENST00000531303 A0A1W2PP64 1363 aa26.15■■□□□ 1.78
SMPD1-205ENST00000531303 ACEP12821 1306 aa26.15■■□□□ 1.78
SMPD1-205ENST00000531303 CD163L1Q9NR16 1453 aa26.14■■□□□ 1.78
SMPD1-205ENST00000531303 SLAIN2Q9P270 581 aa26.12■■□□□ 1.77
SMPD1-205ENST00000531303 KNSTRNQ9Y448 316 aa26.12■■□□□ 1.77
SMPD1-205ENST00000531303 KTN1Q86UP2 1357 aaKnown RBP26.11■■□□□ 1.77
SMPD1-205ENST00000531303 PER1O15534 1290 aaPredicted RBP26.11■■□□□ 1.77
SMPD1-205ENST00000531303 AKAP12Q02952 1782 aa26.1■■□□□ 1.77
SMPD1-205ENST00000531303 NSD3Q9BZ95 1437 aa26.1■■□□□ 1.77
SMPD1-205ENST00000531303 CPSF1Q10570 1443 aaKnown RBP26.09■■□□□ 1.77
SMPD1-205ENST00000531303 ZNF692Q9BU19 519 aaPredicted RBP26.08■■□□□ 1.77
SMPD1-205ENST00000531303 FOXO3O43524 673 aa26.07■■□□□ 1.76
SMPD1-205ENST00000531303 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.07■■□□□ 1.76
SMPD1-205ENST00000531303 POLR3AO14802 1390 aaPredicted RBP26.06■■□□□ 1.76
SMPD1-205ENST00000531303 CC2D1BQ5T0F9 858 aaKnown RBP26.05■■□□□ 1.76
SMPD1-205ENST00000531303 CERKQ8TCT0 537 aa26.05■■□□□ 1.76
SMPD1-205ENST00000531303 MON2Q7Z3U7 1717 aa26.05■■□□□ 1.76
SMPD1-205ENST00000531303 XPCQ01831 940 aaPredicted RBP26.04■■□□□ 1.76
SMPD1-205ENST00000531303 PSME1Q06323 249 aa26.04■■□□□ 1.76
SMPD1-205ENST00000531303 KIF1AQ12756 1690 aa26.04■■□□□ 1.76
SMPD1-205ENST00000531303 BRINP3Q76B58 766 aa26.04■■□□□ 1.76
SMPD1-205ENST00000531303 DDX17Q92841 729 aaKnown RBP26.04■■□□□ 1.76
SMPD1-205ENST00000531303 ANP32CO43423 234 aa26.02■■□□□ 1.76
SMPD1-205ENST00000531303 USP6P35125 1406 aa26.02■■□□□ 1.76
SMPD1-205ENST00000531303 CGNL1Q0VF96 1302 aa26.01■■□□□ 1.75
SMPD1-205ENST00000531303 AMER1Q5JTC6 1135 aaPredicted RBP26.01■■□□□ 1.75
SMPD1-205ENST00000531303 EDC4Q6P2E9 1401 aaKnown RBP26■■□□□ 1.75
SMPD1-205ENST00000531303 UBAP1LF5GYI3 381 aa26■■□□□ 1.75
SMPD1-205ENST00000531303 TOM1O60784 492 aa25.99■■□□□ 1.75
SMPD1-205ENST00000531303 PAK3O75914 559 aaPredicted RBP25.99■■□□□ 1.75
SMPD1-205ENST00000531303 TTC21BQ7Z4L5 1316 aa25.99■■□□□ 1.75
SMPD1-205ENST00000531303 SCAF1Q9H7N4 1312 aaKnown RBP25.98■■□□□ 1.75
SMPD1-205ENST00000531303 PIP4K2BP78356 416 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms