RNA–Protein interactions for RNA: ENST00000531034.1

PTP4A1P6-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 6, humanhuman

BASIC

Gene PTP4A1P6, Length 478 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P6-201ENST00000531034 TOR4AQ9NXH8 423 aa7.46□□□□□ -1.22
PTP4A1P6-201ENST00000531034 DDX11L8A8MPP1 907 aa7.45□□□□□ -1.22
PTP4A1P6-201ENST00000531034 FUT2Q10981 343 aa7.45□□□□□ -1.22
PTP4A1P6-201ENST00000531034 PLA2G2CQ5R387 149 aa7.45□□□□□ -1.22
PTP4A1P6-201ENST00000531034 THAP11Q96EK4 314 aa7.45□□□□□ -1.22
PTP4A1P6-201ENST00000531034 SENP2Q9HC62 589 aa7.45□□□□□ -1.22
PTP4A1P6-201ENST00000531034 TTC24A2A3L6 582 aaPredicted RBP7.44□□□□□ -1.22
PTP4A1P6-201ENST00000531034 INSM1Q01101 510 aaPredicted RBP7.44□□□□□ -1.22
PTP4A1P6-201ENST00000531034 WNT7AO00755 349 aa7.43□□□□□ -1.22
PTP4A1P6-201ENST00000531034 SNIP1Q8TAD8 396 aaKnown RBP7.43□□□□□ -1.22
PTP4A1P6-201ENST00000531034 C11orf95C9JLR9 678 aaPredicted RBP7.42□□□□□ -1.22
PTP4A1P6-201ENST00000531034 USP46P62068 366 aa7.42□□□□□ -1.22
PTP4A1P6-201ENST00000531034 BRICD5Q6PL45 260 aa7.42□□□□□ -1.22
PTP4A1P6-201ENST00000531034 KIFC2Q96AC6 838 aa7.42□□□□□ -1.22
PTP4A1P6-201ENST00000531034 SLC27A5Q9Y2P5 690 aa7.42□□□□□ -1.22
PTP4A1P6-201ENST00000531034 ST8SIA5O15466 376 aa7.41□□□□□ -1.22
PTP4A1P6-201ENST00000531034 WFS1O76024 890 aa7.41□□□□□ -1.22
PTP4A1P6-201ENST00000531034 STK17AQ9UEE5 414 aa7.41□□□□□ -1.22
PTP4A1P6-201ENST00000531034 MMP16P51512 607 aa7.39□□□□□ -1.23
PTP4A1P6-201ENST00000531034 GPIHBP1Q8IV16 184 aa7.39□□□□□ -1.23
PTP4A1P6-201ENST00000531034 FAM160A2Q8N612 972 aaPredicted RBP7.39□□□□□ -1.23
PTP4A1P6-201ENST00000531034 FAM181BA6NEQ2 426 aa7.38□□□□□ -1.23
PTP4A1P6-201ENST00000531034 POTECB2RU33 542 aa7.38□□□□□ -1.23
PTP4A1P6-201ENST00000531034 SUPT5HO00267 1087 aaKnown RBP7.38□□□□□ -1.23
PTP4A1P6-201ENST00000531034 WIPF1O43516 503 aa7.38□□□□□ -1.23
PTP4A1P6-201ENST00000531034 TRIM32Q13049 653 aa7.38□□□□□ -1.23
PTP4A1P6-201ENST00000531034 RBM26Q5T8P6 1007 aaKnown RBP7.38□□□□□ -1.23
PTP4A1P6-201ENST00000531034 WNT7BP56706 349 aa7.37□□□□□ -1.23
PTP4A1P6-201ENST00000531034 LCE2AQ5TA79 106 aaPredicted RBP7.37□□□□□ -1.23
PTP4A1P6-201ENST00000531034 USB1Q9BQ65 265 aaKnown RBP7.37□□□□□ -1.23
PTP4A1P6-201ENST00000531034 FECHP22830 423 aa7.36□□□□□ -1.23
PTP4A1P6-201ENST00000531034 GMPR2Q9P2T1 348 aaKnown RBP7.36□□□□□ -1.23
PTP4A1P6-201ENST00000531034 GPR37O15354 613 aa7.35□□□□□ -1.23
PTP4A1P6-201ENST00000531034 KDM4AO75164 1064 aa7.35□□□□□ -1.23
PTP4A1P6-201ENST00000531034 DXOO77932 396 aaKnown RBP7.34□□□□□ -1.23
PTP4A1P6-201ENST00000531034 CD46P15529 392 aa7.34□□□□□ -1.23
PTP4A1P6-201ENST00000531034 MAP2K5Q13163 448 aa7.34□□□□□ -1.23
PTP4A1P6-201ENST00000531034 NPM2Q86SE8 214 aaKnown RBP7.34□□□□□ -1.23
PTP4A1P6-201ENST00000531034 TRIM47Q96LD4 638 aa7.34□□□□□ -1.23
PTP4A1P6-201ENST00000531034 ATP13A2Q9NQ11 1180 aa7.34□□□□□ -1.23
PTP4A1P6-201ENST00000531034 NPAS3Q8IXF0 933 aa7.33□□□□□ -1.24
PTP4A1P6-201ENST00000531034 SLC16A10Q8TF71 515 aa7.33□□□□□ -1.24
PTP4A1P6-201ENST00000531034 BRPF1P55201 1214 aaPredicted RBP7.32□□□□□ -1.24
PTP4A1P6-201ENST00000531034 RNF19BQ6ZMZ0 732 aa7.32□□□□□ -1.24
PTP4A1P6-201ENST00000531034 PRDM9Q9NQV7 894 aa7.32□□□□□ -1.24
PTP4A1P6-201ENST00000531034 SMPD1P17405 629 aa7.31□□□□□ -1.24
PTP4A1P6-201ENST00000531034 NFX1Q12986 1120 aaKnown RBP7.31□□□□□ -1.24
PTP4A1P6-201ENST00000531034 MRGPRX2Q96LB1 330 aa7.31□□□□□ -1.24
PTP4A1P6-201ENST00000531034 MINK1Q8N4C8 1332 aaPredicted RBP7.29□□□□□ -1.24
PTP4A1P6-201ENST00000531034 TERTO14746 1132 aaKnown RBP7.29□□□□□ -1.24
PTP4A1P6-201ENST00000531034 UBTFP17480 764 aaKnown RBP7.28□□□□□ -1.24
PTP4A1P6-201ENST00000531034 CLCN1P35523 988 aa7.28□□□□□ -1.24
PTP4A1P6-201ENST00000531034 TRIM26Q12899 539 aaPredicted RBP7.28□□□□□ -1.24
PTP4A1P6-201ENST00000531034 RC3H1Q5TC82 1133 aaKnown RBP7.28□□□□□ -1.24
PTP4A1P6-201ENST00000531034 JUNDP17535 347 aa7.27□□□□□ -1.25
PTP4A1P6-201ENST00000531034 CCDC24Q8N4L8 307 aa7.27□□□□□ -1.25
PTP4A1P6-201ENST00000531034 PHOX2BQ99453 314 aa7.27□□□□□ -1.25
PTP4A1P6-201ENST00000531034 DACH1Q9UI36 760 aa7.27□□□□□ -1.25
PTP4A1P6-201ENST00000531034 HOXA2O43364 376 aa7.26□□□□□ -1.25
PTP4A1P6-201ENST00000531034 RETREG3Q86VR2 466 aa7.26□□□□□ -1.25
PTP4A1P6-201ENST00000531034 KRI1Q8N9T8 703 aaKnown RBP7.26□□□□□ -1.25
PTP4A1P6-201ENST00000531034 GPCPD1Q9NPB8 672 aa7.26□□□□□ -1.25
PTP4A1P6-201ENST00000531034 IRF6O14896 467 aa7.25□□□□□ -1.25
PTP4A1P6-201ENST00000531034 NUTM1Q86Y26 1132 aa7.25□□□□□ -1.25
PTP4A1P6-201ENST00000531034 WASF2Q9Y6W5 498 aa7.25□□□□□ -1.25
PTP4A1P6-201ENST00000531034 PLEKHG3A1L390 1219 aa7.24□□□□□ -1.25
PTP4A1P6-201ENST00000531034 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.24□□□□□ -1.25
PTP4A1P6-201ENST00000531034 EHBP1Q8NDI1 1231 aa7.24□□□□□ -1.25
PTP4A1P6-201ENST00000531034 IRF7Q92985 503 aa7.24□□□□□ -1.25
PTP4A1P6-201ENST00000531034 NUDT12Q9BQG2 462 aa7.24□□□□□ -1.25
PTP4A1P6-201ENST00000531034 J3QL48 77 aa7.23□□□□□ -1.25
PTP4A1P6-201ENST00000531034 ALDH1A1P00352 501 aa7.23□□□□□ -1.25
PTP4A1P6-201ENST00000531034 NLRP7Q8WX94 980 aa7.23□□□□□ -1.25
PTP4A1P6-201ENST00000531034 NXF1Q9UBU9 619 aaKnown RBP7.23□□□□□ -1.25
PTP4A1P6-201ENST00000531034 SPDYE5A6NIY4 337 aa7.22□□□□□ -1.25
PTP4A1P6-201ENST00000531034 HPS1Q92902 700 aa7.22□□□□□ -1.25
PTP4A1P6-201ENST00000531034 SNRPBP14678 240 aaKnown RBP7.21□□□□□ -1.26
PTP4A1P6-201ENST00000531034 MDM2Q00987 491 aaPredicted RBP7.21□□□□□ -1.26
PTP4A1P6-201ENST00000531034 MPNDQ8N594 471 aa7.21□□□□□ -1.26
PTP4A1P6-201ENST00000531034 CCNYL3P0C7X3 344 aa7.2□□□□□ -1.26
PTP4A1P6-201ENST00000531034 DIXDC1Q155Q3 683 aa7.2□□□□□ -1.26
PTP4A1P6-201ENST00000531034 NEUROD2Q15784 382 aa7.2□□□□□ -1.26
PTP4A1P6-201ENST00000531034 PTPRNQ16849 979 aa7.2□□□□□ -1.26
PTP4A1P6-201ENST00000531034 CAPN5O15484 640 aaPredicted RBP7.19□□□□□ -1.26
PTP4A1P6-201ENST00000531034 MS4A1P11836 297 aa7.19□□□□□ -1.26
PTP4A1P6-201ENST00000531034 HRCP23327 699 aa7.19□□□□□ -1.26
PTP4A1P6-201ENST00000531034 SKOR1P84550 965 aa7.19□□□□□ -1.26
PTP4A1P6-201ENST00000531034 DESI1Q6ICB0 168 aa7.19□□□□□ -1.26
PTP4A1P6-201ENST00000531034 RSPH6AQ9H0K4 717 aa7.19□□□□□ -1.26
PTP4A1P6-201ENST00000531034 FAM217BQ9NTX9 383 aaPredicted RBP7.19□□□□□ -1.26
PTP4A1P6-201ENST00000531034 VARSP26640 1264 aaKnown RBP7.18□□□□□ -1.26
PTP4A1P6-201ENST00000531034 SIAH2O43255 324 aa7.17□□□□□ -1.26
PTP4A1P6-201ENST00000531034 FDX1P10109 184 aa7.17□□□□□ -1.26
PTP4A1P6-201ENST00000531034 SCARF1Q14162 830 aa7.17□□□□□ -1.26
PTP4A1P6-201ENST00000531034 ZMYND15Q9H091 742 aa7.17□□□□□ -1.26
PTP4A1P6-201ENST00000531034 C6orf229H3BNL8 230 aa7.16□□□□□ -1.26
PTP4A1P6-201ENST00000531034 GJA5P36382 358 aa7.16□□□□□ -1.26
PTP4A1P6-201ENST00000531034 ZSCAN1Q8NBB4 408 aa7.16□□□□□ -1.26
PTP4A1P6-201ENST00000531034 CCDC102AQ96A19 550 aa7.16□□□□□ -1.26
PTP4A1P6-201ENST00000531034 EVA1BQ9NVM1 165 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms