RNA–Protein interactions for RNA: ENST00000531023.1

PSMA1-210, Transcript of proteasome subunit alpha 1, humanhuman

TSL 2

Gene PSMA1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA1-210ENST00000531023 MDM2Q00987 491 aaPredicted RBP9.78□□□□□ -0.84
PSMA1-210ENST00000531023 AAASQ9NRG9 546 aa9.78□□□□□ -0.84
PSMA1-210ENST00000531023 ST8SIA5O15466 376 aa9.77□□□□□ -0.85
PSMA1-210ENST00000531023 USB1Q9BQ65 265 aaKnown RBP9.77□□□□□ -0.85
PSMA1-210ENST00000531023 TOR4AQ9NXH8 423 aa9.77□□□□□ -0.85
PSMA1-210ENST00000531023 POTECB2RU33 542 aa9.76□□□□□ -0.85
PSMA1-210ENST00000531023 TTC24A2A3L6 582 aaPredicted RBP9.75□□□□□ -0.85
PSMA1-210ENST00000531023 MMP16P51512 607 aa9.75□□□□□ -0.85
PSMA1-210ENST00000531023 CRIPAKQ8N1N5 446 aa9.75□□□□□ -0.85
PSMA1-210ENST00000531023 AVPP01185 164 aa9.73□□□□□ -0.85
PSMA1-210ENST00000531023 TRIM32Q13049 653 aa9.73□□□□□ -0.85
PSMA1-210ENST00000531023 CTC1Q2NKJ3 1217 aa9.73□□□□□ -0.85
PSMA1-210ENST00000531023 KRI1Q8N9T8 703 aaKnown RBP9.73□□□□□ -0.85
PSMA1-210ENST00000531023 WNT7AO00755 349 aa9.72□□□□□ -0.85
PSMA1-210ENST00000531023 AXIN1O15169 862 aa9.72□□□□□ -0.85
PSMA1-210ENST00000531023 DXOO77932 396 aaKnown RBP9.72□□□□□ -0.85
PSMA1-210ENST00000531023 CLCN1P35523 988 aa9.72□□□□□ -0.85
PSMA1-210ENST00000531023 CCDC102AQ96A19 550 aa9.72□□□□□ -0.85
PSMA1-210ENST00000531023 GPCPD1Q9NPB8 672 aa9.71□□□□□ -0.86
PSMA1-210ENST00000531023 HOXA2O43364 376 aa9.7□□□□□ -0.86
PSMA1-210ENST00000531023 SNIP1Q8TAD8 396 aaKnown RBP9.7□□□□□ -0.86
PSMA1-210ENST00000531023 SMCPP49901 116 aaPredicted RBP9.69□□□□□ -0.86
PSMA1-210ENST00000531023 NUTM1Q86Y26 1132 aa9.69□□□□□ -0.86
PSMA1-210ENST00000531023 CCDC24Q8N4L8 307 aa9.69□□□□□ -0.86
PSMA1-210ENST00000531023 HLA-CQ95604 372 aa9.68□□□□□ -0.86
PSMA1-210ENST00000531023 REPIN1Q9BWE0 567 aaKnown RBP9.68□□□□□ -0.86
PSMA1-210ENST00000531023 FAM217BQ9NTX9 383 aaPredicted RBP9.68□□□□□ -0.86
PSMA1-210ENST00000531023 MRGPRX2Q96LB1 330 aa9.66□□□□□ -0.86
PSMA1-210ENST00000531023 DACH1Q9UI36 760 aa9.66□□□□□ -0.86
PSMA1-210ENST00000531023 C11orf95C9JLR9 678 aaPredicted RBP9.65□□□□□ -0.86
PSMA1-210ENST00000531023 SMPD1P17405 629 aa9.65□□□□□ -0.86
PSMA1-210ENST00000531023 JUNDP17535 347 aa9.64□□□□□ -0.87
PSMA1-210ENST00000531023 WNT7BP56706 349 aa9.64□□□□□ -0.87
PSMA1-210ENST00000531023 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.64□□□□□ -0.87
PSMA1-210ENST00000531023 GUCA2AQ02747 115 aa9.63□□□□□ -0.87
PSMA1-210ENST00000531023 TREML4Q6UXN2 200 aa9.63□□□□□ -0.87
PSMA1-210ENST00000531023 GMPR2Q9P2T1 348 aaKnown RBP9.63□□□□□ -0.87
PSMA1-210ENST00000531023 RC3H1Q5TC82 1133 aaKnown RBP9.62□□□□□ -0.87
PSMA1-210ENST00000531023 RETREG3Q86VR2 466 aa9.62□□□□□ -0.87
PSMA1-210ENST00000531023 J3QL48 77 aa9.61□□□□□ -0.87
PSMA1-210ENST00000531023 SYMPKQ92797 1274 aaKnown RBP9.61□□□□□ -0.87
PSMA1-210ENST00000531023 FDX1P10109 184 aa9.6□□□□□ -0.87
PSMA1-210ENST00000531023 C6orf229H3BNL8 230 aa9.59□□□□□ -0.87
PSMA1-210ENST00000531023 SSTR3P32745 418 aaPredicted RBP9.59□□□□□ -0.87
PSMA1-210ENST00000531023 NUDT12Q9BQG2 462 aa9.59□□□□□ -0.87
PSMA1-210ENST00000531023 SKOR1P84550 965 aa9.58□□□□□ -0.88
PSMA1-210ENST00000531023 SENP2Q9HC62 589 aa9.58□□□□□ -0.88
PSMA1-210ENST00000531023 ATP13A2Q9NQ11 1180 aa9.58□□□□□ -0.88
PSMA1-210ENST00000531023 TTLL12Q14166 644 aaPredicted RBP9.57□□□□□ -0.88
PSMA1-210ENST00000531023 ALDH1A1P00352 501 aa9.56□□□□□ -0.88
PSMA1-210ENST00000531023 MS4A1P11836 297 aa9.56□□□□□ -0.88
PSMA1-210ENST00000531023 BARGINQ6ZT62 677 aa9.56□□□□□ -0.88
PSMA1-210ENST00000531023 HPS1Q92902 700 aa9.56□□□□□ -0.88
PSMA1-210ENST00000531023 PCDHGC3Q9UN70 934 aa9.56□□□□□ -0.88
PSMA1-210ENST00000531023 WFS1O76024 890 aa9.55□□□□□ -0.88
PSMA1-210ENST00000531023 CCNYL3P0C7X3 344 aa9.54□□□□□ -0.88
PSMA1-210ENST00000531023 LCE2AQ5TA79 106 aaPredicted RBP9.54□□□□□ -0.88
PSMA1-210ENST00000531023 PTCRAQ6ISU1 281 aaPredicted RBP9.54□□□□□ -0.88
PSMA1-210ENST00000531023 EHBP1Q8NDI1 1231 aa9.54□□□□□ -0.88
PSMA1-210ENST00000531023 SPIRE2Q8WWL2 714 aa9.54□□□□□ -0.88
PSMA1-210ENST00000531023 KIFC2Q96AC6 838 aa9.53□□□□□ -0.88
PSMA1-210ENST00000531023 ZMYND10O75800 440 aa9.52□□□□□ -0.89
PSMA1-210ENST00000531023 AMHR2Q16671 573 aa9.52□□□□□ -0.89
PSMA1-210ENST00000531023 PTPRNQ16849 979 aa9.52□□□□□ -0.89
PSMA1-210ENST00000531023 TRIM47Q96LD4 638 aa9.52□□□□□ -0.89
PSMA1-210ENST00000531023 MOXD2PA6NHM9 499 aa9.51□□□□□ -0.89
PSMA1-210ENST00000531023 SPDYE5A6NIY4 337 aa9.51□□□□□ -0.89
PSMA1-210ENST00000531023 SNRPBP14678 240 aaKnown RBP9.51□□□□□ -0.89
PSMA1-210ENST00000531023 NDUFV2P19404 249 aa9.51□□□□□ -0.89
PSMA1-210ENST00000531023 GIGYF2Q6Y7W6 1299 aaKnown RBP9.51□□□□□ -0.89
PSMA1-210ENST00000531023 WASF2Q9Y6W5 498 aa9.51□□□□□ -0.89
PSMA1-210ENST00000531023 EVA1BQ9NVM1 165 aa9.5□□□□□ -0.89
PSMA1-210ENST00000531023 SIAH2O43255 324 aa9.49□□□□□ -0.89
PSMA1-210ENST00000531023 MTMR2Q13614 643 aa9.49□□□□□ -0.89
PSMA1-210ENST00000531023 DIXDC1Q155Q3 683 aa9.49□□□□□ -0.89
PSMA1-210ENST00000531023 PRR7Q8TB68 274 aa9.49□□□□□ -0.89
PSMA1-210ENST00000531023 ZC3H15Q8WU90 426 aaKnown RBP9.49□□□□□ -0.89
PSMA1-210ENST00000531023 SH3BP2P78314 561 aa9.48□□□□□ -0.89
PSMA1-210ENST00000531023 NFX1Q12986 1120 aaKnown RBP9.48□□□□□ -0.89
PSMA1-210ENST00000531023 DESI1Q6ICB0 168 aa9.48□□□□□ -0.89
PSMA1-210ENST00000531023 BEGAINQ9BUH8 593 aa9.48□□□□□ -0.89
PSMA1-210ENST00000531023 GJA5P36382 358 aa9.47□□□□□ -0.89
PSMA1-210ENST00000531023 KCNH2Q12809 1159 aa9.47□□□□□ -0.89
PSMA1-210ENST00000531023 UNC93B1Q9H1C4 597 aa9.47□□□□□ -0.89
PSMA1-210ENST00000531023 TERTO14746 1132 aaKnown RBP9.46□□□□□ -0.9
PSMA1-210ENST00000531023 CAPN5O15484 640 aaPredicted RBP9.45□□□□□ -0.9
PSMA1-210ENST00000531023 BAP1Q92560 729 aa9.45□□□□□ -0.9
PSMA1-210ENST00000531023 PLEKHG3A1L390 1219 aa9.44□□□□□ -0.9
PSMA1-210ENST00000531023 LINC01559Q495D7 138 aa9.44□□□□□ -0.9
PSMA1-210ENST00000531023 TBC1D2Q9BYX2 928 aa9.44□□□□□ -0.9
PSMA1-210ENST00000531023 VARSP26640 1264 aaKnown RBP9.43□□□□□ -0.9
PSMA1-210ENST00000531023 WIPF1O43516 503 aa9.42□□□□□ -0.9
PSMA1-210ENST00000531023 INSM1Q01101 510 aaPredicted RBP9.42□□□□□ -0.9
PSMA1-210ENST00000531023 RSBN1LQ6PCB5 846 aaPredicted RBP9.42□□□□□ -0.9
PSMA1-210ENST00000531023 ZNF511Q8NB15 262 aa9.42□□□□□ -0.9
PSMA1-210ENST00000531023 CTHP32929 405 aa9.41□□□□□ -0.9
PSMA1-210ENST00000531023 PARP9Q8IXQ6 854 aa9.41□□□□□ -0.9
PSMA1-210ENST00000531023 SLC16A10Q8TF71 515 aa9.41□□□□□ -0.9
PSMA1-210ENST00000531023 TRIM66O15016 1216 aa9.4□□□□□ -0.9
PSMA1-210ENST00000531023 LYPD8Q6UX82 237 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms