RNA–Protein interactions for RNA: ENST00000530820.5

CAPRIN1-209, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,454 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-209ENST00000530820 WDR43Q15061 677 aaKnown RBP eCLIP10.8□□□□□ -0.68
CAPRIN1-209ENST00000530820 TICAM2Q86XR7 235 aa10.8□□□□□ -0.68
CAPRIN1-209ENST00000530820 PLEKHA4Q9H4M7 779 aa10.79□□□□□ -0.68
CAPRIN1-209ENST00000530820 GDPD2Q9HCC8 539 aa10.79□□□□□ -0.68
CAPRIN1-209ENST00000530820 GOLGA6L6A8MZA4 724 aa10.79□□□□□ -0.68
CAPRIN1-209ENST00000530820 ICE2Q659A1 982 aa10.79□□□□□ -0.68
CAPRIN1-209ENST00000530820 ZCCHC17Q9NP64 241 aaKnown RBP10.79□□□□□ -0.68
CAPRIN1-209ENST00000530820 RNF123Q5XPI4 1314 aa10.79□□□□□ -0.68
CAPRIN1-209ENST00000530820 TNIKQ9UKE5 1360 aa10.79□□□□□ -0.68
CAPRIN1-209ENST00000530820 ABCC8Q09428 1581 aa10.79□□□□□ -0.68
CAPRIN1-209ENST00000530820 FRMD3A2A2Y4 597 aa10.79□□□□□ -0.68
CAPRIN1-209ENST00000530820 TERF1P54274 439 aa10.78□□□□□ -0.68
CAPRIN1-209ENST00000530820 PRIMPOLQ96LW4 560 aa10.78□□□□□ -0.68
CAPRIN1-209ENST00000530820 NCAPGQ9BPX3 1015 aa10.78□□□□□ -0.68
CAPRIN1-209ENST00000530820 TAOK2Q9UL54 1235 aa10.78□□□□□ -0.68
CAPRIN1-209ENST00000530820 GORABQ5T7V8 394 aa10.78□□□□□ -0.68
CAPRIN1-209ENST00000530820 PNISRQ8TF01 805 aaKnown RBP10.78□□□□□ -0.68
CAPRIN1-209ENST00000530820 PKP1Q13835 747 aa10.78□□□□□ -0.68
CAPRIN1-209ENST00000530820 HSP90AB3PQ58FF7 597 aa10.78□□□□□ -0.68
CAPRIN1-209ENST00000530820 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.78□□□□□ -0.68
CAPRIN1-209ENST00000530820 HMGN5P82970 282 aaKnown RBP10.77□□□□□ -0.68
CAPRIN1-209ENST00000530820 DEF6Q9H4E7 631 aa10.77□□□□□ -0.68
CAPRIN1-209ENST00000530820 IFT57Q9NWB7 429 aa10.77□□□□□ -0.68
CAPRIN1-209ENST00000530820 G3BP2Q9UN86 482 aaKnown RBP10.77□□□□□ -0.68
CAPRIN1-209ENST00000530820 CHMP3Q9Y3E7 222 aa10.77□□□□□ -0.68
CAPRIN1-209ENST00000530820 LRCH2Q5VUJ6 765 aa10.77□□□□□ -0.69
CAPRIN1-209ENST00000530820 DRC7Q8IY82 874 aa10.77□□□□□ -0.69
CAPRIN1-209ENST00000530820 NSFL1CQ9UNZ2 370 aaKnown RBP10.77□□□□□ -0.69
CAPRIN1-209ENST00000530820 JRKLQ9Y4A0 524 aa10.77□□□□□ -0.69
CAPRIN1-209ENST00000530820 SCRIBQ14160 1630 aa10.76□□□□□ -0.69
CAPRIN1-209ENST00000530820 MYO1CO00159 1063 aa10.76□□□□□ -0.69
CAPRIN1-209ENST00000530820 IRAK4Q9NWZ3 460 aa10.76□□□□□ -0.69
CAPRIN1-209ENST00000530820 RPAINQ86UA6 219 aa10.75□□□□□ -0.69
CAPRIN1-209ENST00000530820 KRT222Q8N1A0 295 aa10.75□□□□□ -0.69
CAPRIN1-209ENST00000530820 MAP2K1Q02750 393 aaPredicted RBP10.75□□□□□ -0.69
CAPRIN1-209ENST00000530820 CCDC146Q8IYE0 955 aa10.75□□□□□ -0.69
CAPRIN1-209ENST00000530820 CXorf56Q9H5V9 222 aa10.75□□□□□ -0.69
CAPRIN1-209ENST00000530820 GRIPAP1Q4V328 841 aa10.75□□□□□ -0.69
CAPRIN1-209ENST00000530820 SCP2P22307 547 aa10.74□□□□□ -0.69
CAPRIN1-209ENST00000530820 TBC1D32Q96NH3 1257 aa10.74□□□□□ -0.69
CAPRIN1-209ENST00000530820 CD2BP2O95400 341 aaKnown RBP10.74□□□□□ -0.69
CAPRIN1-209ENST00000530820 NOP2P46087 812 aaKnown RBP10.74□□□□□ -0.69
CAPRIN1-209ENST00000530820 NCBP1Q09161 790 aaKnown RBP10.74□□□□□ -0.69
CAPRIN1-209ENST00000530820 RABEP2Q9H5N1 569 aa10.74□□□□□ -0.69
CAPRIN1-209ENST00000530820 LRRFIP2Q9Y608 721 aaKnown RBP10.74□□□□□ -0.69
CAPRIN1-209ENST00000530820 KIF7Q2M1P5 1343 aa10.74□□□□□ -0.69
CAPRIN1-209ENST00000530820 CAND2O75155 1236 aa10.74□□□□□ -0.69
CAPRIN1-209ENST00000530820 NEBLO76041 1014 aa10.74□□□□□ -0.69
CAPRIN1-209ENST00000530820 BRPF1P55201 1214 aaPredicted RBP10.74□□□□□ -0.69
CAPRIN1-209ENST00000530820 KIRREL3Q8IZU9 778 aa10.74□□□□□ -0.69
CAPRIN1-209ENST00000530820 PRDM16Q9HAZ2 1276 aa10.74□□□□□ -0.69
CAPRIN1-209ENST00000530820 PYCARDQ9ULZ3 195 aa10.74□□□□□ -0.69
CAPRIN1-209ENST00000530820 PHF14O94880 888 aa10.73□□□□□ -0.69
CAPRIN1-209ENST00000530820 SATB1Q01826 763 aa10.73□□□□□ -0.69
CAPRIN1-209ENST00000530820 MFSD4BQ5TF39 518 aa10.73□□□□□ -0.69
CAPRIN1-209ENST00000530820 CWC27Q6UX04 472 aaKnown RBP10.73□□□□□ -0.69
CAPRIN1-209ENST00000530820 ARMCX6Q7L4S7 300 aa10.73□□□□□ -0.69
CAPRIN1-209ENST00000530820 MIS18AQ9NYP9 233 aa10.73□□□□□ -0.69
CAPRIN1-209ENST00000530820 RB1CC1Q8TDY2 1594 aa10.73□□□□□ -0.69
CAPRIN1-209ENST00000530820 ST5P78524 1137 aa10.72□□□□□ -0.69
CAPRIN1-209ENST00000530820 TNNQ9UQP3 1299 aa10.72□□□□□ -0.69
CAPRIN1-209ENST00000530820 SLC26A8Q96RN1 970 aa10.72□□□□□ -0.69
CAPRIN1-209ENST00000530820 CTNNA3Q9UI47 895 aa10.72□□□□□ -0.69
CAPRIN1-209ENST00000530820 CCDC88BA6NC98 1476 aa10.72□□□□□ -0.69
CAPRIN1-209ENST00000530820 BAG4O95429 457 aaKnown RBP10.72□□□□□ -0.69
CAPRIN1-209ENST00000530820 LMAN1P49257 510 aa10.72□□□□□ -0.69
CAPRIN1-209ENST00000530820 MNAT1P51948 309 aa10.72□□□□□ -0.69
CAPRIN1-209ENST00000530820 CCDC34Q96HJ3 373 aa10.72□□□□□ -0.69
CAPRIN1-209ENST00000530820 CWC22Q9HCG8 908 aaKnown RBP10.72□□□□□ -0.69
CAPRIN1-209ENST00000530820 RRP7BPQ9NSQ0 103 aa10.72□□□□□ -0.69
CAPRIN1-209ENST00000530820 CASQ1P31415 396 aa10.71□□□□□ -0.69
CAPRIN1-209ENST00000530820 GABPB1Q06547 395 aaPredicted RBP10.71□□□□□ -0.69
CAPRIN1-209ENST00000530820 SKOR2Q2VWA4 1001 aaPredicted RBP10.71□□□□□ -0.69
CAPRIN1-209ENST00000530820 NAIF1Q69YI7 327 aaPredicted RBP10.71□□□□□ -0.69
CAPRIN1-209ENST00000530820 CCNB3Q8WWL7 1395 aa10.71□□□□□ -0.69
CAPRIN1-209ENST00000530820 NCAPD3P42695 1498 aa10.71□□□□□ -0.69
CAPRIN1-209ENST00000530820 KDM2BQ8NHM5 1336 aa10.71□□□□□ -0.69
CAPRIN1-209ENST00000530820 ATP2B2Q01814 1243 aa10.71□□□□□ -0.69
CAPRIN1-209ENST00000530820 ISM2Q6H9L7 571 aa10.71□□□□□ -0.69
CAPRIN1-209ENST00000530820 POLKQ9UBT6 870 aa10.71□□□□□ -0.69
CAPRIN1-209ENST00000530820 PDZRN3Q9UPQ7 1066 aa10.71□□□□□ -0.69
CAPRIN1-209ENST00000530820 TULP2O00295 520 aa10.71□□□□□ -0.7
CAPRIN1-209ENST00000530820 ELF2Q15723 593 aa10.71□□□□□ -0.7
CAPRIN1-209ENST00000530820 GOLGA6L1Q8N7Z2 621 aa10.71□□□□□ -0.7
CAPRIN1-209ENST00000530820 EFCC1Q9HA90 598 aa10.71□□□□□ -0.7
CAPRIN1-209ENST00000530820 ADCY5O95622 1261 aa10.7□□□□□ -0.7
CAPRIN1-209ENST00000530820 ARL10Q8N8L6 244 aa10.7□□□□□ -0.7
CAPRIN1-209ENST00000530820 TRMT1Q9NXH9 659 aaKnown RBP10.7□□□□□ -0.7
CAPRIN1-209ENST00000530820 DIAPH3Q9NSV4 1193 aa10.7□□□□□ -0.7
CAPRIN1-209ENST00000530820 ZNF853P0CG23 659 aa10.7□□□□□ -0.7
CAPRIN1-209ENST00000530820 TTC31Q49AM3 519 aaPredicted RBP10.7□□□□□ -0.7
CAPRIN1-209ENST00000530820 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.7□□□□□ -0.7
CAPRIN1-209ENST00000530820 GAS2L2Q8NHY3 880 aa10.7□□□□□ -0.7
CAPRIN1-209ENST00000530820 TMEM63CQ9P1W3 806 aa10.7□□□□□ -0.7
CAPRIN1-209ENST00000530820 L3MBTL2Q969R5 705 aa10.69□□□□□ -0.7
CAPRIN1-209ENST00000530820 CNTLNQ9NXG0 1405 aa10.69□□□□□ -0.7
CAPRIN1-209ENST00000530820 H0YHG0 523 aa10.69□□□□□ -0.7
CAPRIN1-209ENST00000530820 SARNPP82979 210 aaKnown RBP10.69□□□□□ -0.7
CAPRIN1-209ENST00000530820 EXOC6BQ9Y2D4 811 aa10.69□□□□□ -0.7
CAPRIN1-209ENST00000530820 KDM2AQ9Y2K7 1162 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms