RNA–Protein interactions for RNA: ENST00000530620.5

C11orf54-209, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-209ENST00000530620 PPLO60437 1756 aa16.21■□□□□ 0.18
C11orf54-209ENST00000530620 ASXL1Q8IXJ9 1541 aa16.2■□□□□ 0.18
C11orf54-209ENST00000530620 CADPS2Q86UW7 1296 aa16.2■□□□□ 0.18
C11orf54-209ENST00000530620 PROM2Q8N271 834 aa16.2■□□□□ 0.18
C11orf54-209ENST00000530620 METP08581 1390 aa16.19■□□□□ 0.18
C11orf54-209ENST00000530620 ATF3P18847 181 aa16.19■□□□□ 0.18
C11orf54-209ENST00000530620 ZNF326Q5BKZ1 582 aaKnown RBP16.19■□□□□ 0.18
C11orf54-209ENST00000530620 MST1RQ04912 1400 aa16.18■□□□□ 0.18
C11orf54-209ENST00000530620 HFM1A2PYH4 1435 aa16.17■□□□□ 0.18
C11orf54-209ENST00000530620 SPDYE1Q8NFV5 336 aaPredicted RBP16.16■□□□□ 0.18
C11orf54-209ENST00000530620 ADGRL3Q9HAR2 1447 aa16.16■□□□□ 0.18
C11orf54-209ENST00000530620 BRINP3Q76B58 766 aa16.15■□□□□ 0.18
C11orf54-209ENST00000530620 SPATA31A6Q5VVP1 1343 aa16.15■□□□□ 0.18
C11orf54-209ENST00000530620 PITPNM1O00562 1244 aa16.13■□□□□ 0.17
C11orf54-209ENST00000530620 IFT172Q9UG01 1749 aa16.13■□□□□ 0.17
C11orf54-209ENST00000530620 LAMC1P11047 1609 aa16.12■□□□□ 0.17
C11orf54-209ENST00000530620 PTCH1Q13635 1447 aa16.11■□□□□ 0.17
C11orf54-209ENST00000530620 SETD5Q9C0A6 1442 aa16.11■□□□□ 0.17
C11orf54-209ENST00000530620 MEX3CQ5U5Q3 659 aaKnown RBP16.1■□□□□ 0.17
C11orf54-209ENST00000530620 TRIM52Q96A61 297 aa16.1■□□□□ 0.17
C11orf54-209ENST00000530620 PRAG1Q86YV5 1406 aa16.09■□□□□ 0.17
C11orf54-209ENST00000530620 CLEC11AQ9Y240 323 aa16.08■□□□□ 0.16
C11orf54-209ENST00000530620 ROBO2Q9HCK4 1378 aa16.07■□□□□ 0.16
C11orf54-209ENST00000530620 C1orf167Q5SNV9 1468 aa16.06■□□□□ 0.16
C11orf54-209ENST00000530620 CHRDL2Q6WN34 429 aa16.06■□□□□ 0.16
C11orf54-209ENST00000530620 NUTM2BA6NNL0 878 aaPredicted RBP16.05■□□□□ 0.16
C11orf54-209ENST00000530620 NUTM2EB1AL46 878 aaPredicted RBP16.05■□□□□ 0.16
C11orf54-209ENST00000530620 NUTM2AQ8IVF1 878 aaPredicted RBP16.05■□□□□ 0.16
C11orf54-209ENST00000530620 DDX17Q92841 729 aaKnown RBP16.05■□□□□ 0.16
C11orf54-209ENST00000530620 KNDC1Q76NI1 1749 aa16.05■□□□□ 0.16
C11orf54-209ENST00000530620 CDC42BPGQ6DT37 1551 aa16.04■□□□□ 0.16
C11orf54-209ENST00000530620 PNPLA6Q8IY17 1366 aa16.04■□□□□ 0.16
C11orf54-209ENST00000530620 VGFO15240 615 aaPredicted RBP16.04■□□□□ 0.16
C11orf54-209ENST00000530620 ZNF772Q68DY9 489 aaPredicted RBP16.04■□□□□ 0.16
C11orf54-209ENST00000530620 RPGRIP1LQ68CZ1 1315 aa16.02■□□□□ 0.16
C11orf54-209ENST00000530620 COL22A1Q8NFW1 1626 aaPredicted RBP16.01■□□□□ 0.15
C11orf54-209ENST00000530620 MARF1Q9Y4F3 1742 aaKnown RBP16.01■□□□□ 0.15
C11orf54-209ENST00000530620 CCDC144AA2RUR9 1427 aa16.01■□□□□ 0.15
C11orf54-209ENST00000530620 AFF2P51816 1311 aa16■□□□□ 0.15
C11orf54-209ENST00000530620 CDK12Q9NYV4 1490 aaPredicted RBP16■□□□□ 0.15
C11orf54-209ENST00000530620 LRRC59Q96AG4 307 aaKnown RBP16■□□□□ 0.15
C11orf54-209ENST00000530620 SPATA31E1Q6ZUB1 1445 aa16■□□□□ 0.15
C11orf54-209ENST00000530620 ORAI2Q96SN7 254 aa15.98■□□□□ 0.15
C11orf54-209ENST00000530620 FMN2Q9NZ56 1722 aa15.98■□□□□ 0.15
C11orf54-209ENST00000530620 SOS2Q07890 1332 aaPredicted RBP15.96■□□□□ 0.15
C11orf54-209ENST00000530620 ADGRF5Q8IZF2 1346 aa15.96■□□□□ 0.15
C11orf54-209ENST00000530620 TECPR2O15040 1411 aa15.96■□□□□ 0.15
C11orf54-209ENST00000530620 RXRBP28702 533 aa15.96■□□□□ 0.15
C11orf54-209ENST00000530620 C8orf37Q96NL8 207 aa15.96■□□□□ 0.15
C11orf54-209ENST00000530620 RGPD8O14715 1765 aaPredicted RBP15.95■□□□□ 0.14
C11orf54-209ENST00000530620 RGS12O14924 1447 aa15.95■□□□□ 0.14
C11orf54-209ENST00000530620 PIK3C2GO75747 1445 aa15.94■□□□□ 0.14
C11orf54-209ENST00000530620 PXDNQ92626 1479 aa15.94■□□□□ 0.14
C11orf54-209ENST00000530620 KIF1AQ12756 1690 aa15.93■□□□□ 0.14
C11orf54-209ENST00000530620 ANKRD30BQ9BXX2 1392 aa15.93■□□□□ 0.14
C11orf54-209ENST00000530620 UPF1Q92900 1129 aaKnown RBP eCLIP15.93■□□□□ 0.14
C11orf54-209ENST00000530620 ADAMTS2O95450 1211 aa15.92■□□□□ 0.14
C11orf54-209ENST00000530620 PRR29P0C7W0 189 aa15.92■□□□□ 0.14
C11orf54-209ENST00000530620 RGL3Q3MIN7 710 aa15.92■□□□□ 0.14
C11orf54-209ENST00000530620 MPHOSPH9Q99550 1183 aa15.92■□□□□ 0.14
C11orf54-209ENST00000530620 MYOM2P54296 1465 aa15.91■□□□□ 0.14
C11orf54-209ENST00000530620 LRPPRCP42704 1394 aaKnown RBP15.91■□□□□ 0.14
C11orf54-209ENST00000530620 PLEKHH1Q9ULM0 1364 aa15.9■□□□□ 0.14
C11orf54-209ENST00000530620 STK26Q9P289 416 aa15.9■□□□□ 0.14
C11orf54-209ENST00000530620 YTHDC2Q9H6S0 1430 aaKnown RBP15.89■□□□□ 0.13
C11orf54-209ENST00000530620 NRXN1Q9ULB1 1477 aa15.89■□□□□ 0.13
C11orf54-209ENST00000530620 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.88■□□□□ 0.13
C11orf54-209ENST00000530620 RBM6P78332 1123 aaKnown RBP15.88■□□□□ 0.13
C11orf54-209ENST00000530620 ESCO1Q5FWF5 840 aa15.88■□□□□ 0.13
C11orf54-209ENST00000530620 WAPLQ7Z5K2 1190 aa15.88■□□□□ 0.13
C11orf54-209ENST00000530620 NGLY1Q96IV0 654 aa15.88■□□□□ 0.13
C11orf54-209ENST00000530620 QTRT2Q9H974 415 aaKnown RBP15.88■□□□□ 0.13
C11orf54-209ENST00000530620 NPHP3Q7Z494 1330 aa15.88■□□□□ 0.13
C11orf54-209ENST00000530620 ABCC11Q96J66 1382 aa15.87■□□□□ 0.13
C11orf54-209ENST00000530620 TMEM132EQ6IEE7 984 aa15.87■□□□□ 0.13
C11orf54-209ENST00000530620 FBXO3Q9UK99 471 aa15.87■□□□□ 0.13
C11orf54-209ENST00000530620 ABCA3Q99758 1704 aa15.87■□□□□ 0.13
C11orf54-209ENST00000530620 NUTM2FA1L443 756 aa15.86■□□□□ 0.13
C11orf54-209ENST00000530620 XPCQ01831 940 aaPredicted RBP15.86■□□□□ 0.13
C11orf54-209ENST00000530620 ATRNO75882 1429 aa15.85■□□□□ 0.13
C11orf54-209ENST00000530620 FXR2P51116 673 aaKnown RBP eCLIP15.85■□□□□ 0.13
C11orf54-209ENST00000530620 USP32Q8NFA0 1604 aa15.84■□□□□ 0.13
C11orf54-209ENST00000530620 FOXO3O43524 673 aa15.84■□□□□ 0.13
C11orf54-209ENST00000530620 USP21Q9UK80 565 aa15.84■□□□□ 0.13
C11orf54-209ENST00000530620 PLCH1Q4KWH8 1693 aa15.83■□□□□ 0.13
C11orf54-209ENST00000530620 PIP4P2Q8N4L2 257 aa15.82■□□□□ 0.12
C11orf54-209ENST00000530620 ADGRB2O60241 1585 aa15.82■□□□□ 0.12
C11orf54-209ENST00000530620 ADGRB1O14514 1584 aa15.81■□□□□ 0.12
C11orf54-209ENST00000530620 BCL9LQ86UU0 1499 aa15.81■□□□□ 0.12
C11orf54-209ENST00000530620 FNBP4Q8N3X1 1017 aaPredicted RBP15.81■□□□□ 0.12
C11orf54-209ENST00000530620 DLC1Q96QB1 1528 aa15.81■□□□□ 0.12
C11orf54-209ENST00000530620 RAB3GAP2Q9H2M9 1393 aa15.81■□□□□ 0.12
C11orf54-209ENST00000530620 TRPC5Q9UL62 973 aaPredicted RBP15.81■□□□□ 0.12
C11orf54-209ENST00000530620 BRWD3Q6RI45 1802 aa15.8■□□□□ 0.12
C11orf54-209ENST00000530620 C14orf93Q9H972 538 aaKnown RBP15.8■□□□□ 0.12
C11orf54-209ENST00000530620 GLI3P10071 1580 aa15.79■□□□□ 0.12
C11orf54-209ENST00000530620 CFAP70Q5T0N1 1121 aa15.79■□□□□ 0.12
C11orf54-209ENST00000530620 ATAD2Q6PL18 1390 aa15.78■□□□□ 0.12
C11orf54-209ENST00000530620 ACIN1Q9UKV3 1341 aaKnown RBP15.78■□□□□ 0.12
C11orf54-209ENST00000530620 TRPM3Q9HCF6 1732 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms