RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-231ENST00000529540 NKTRP30414 1462 aaKnown RBP20.04■□□□□ 0.8
NR1H3-231ENST00000529540 CDCA8Q53HL2 280 aa20.03■□□□□ 0.8
NR1H3-231ENST00000529540 TMF1P82094 1093 aa20.03■□□□□ 0.8
NR1H3-231ENST00000529540 PRAM1Q96QH2 718 aa20.03■□□□□ 0.8
NR1H3-231ENST00000529540 QRICH2Q9H0J4 1663 aa20.02■□□□□ 0.8
NR1H3-231ENST00000529540 TESK2Q96S53 571 aa20.01■□□□□ 0.79
NR1H3-231ENST00000529540 ROBO2Q9HCK4 1378 aa20■□□□□ 0.79
NR1H3-231ENST00000529540 ANP32EQ9BTT0 268 aa19.99■□□□□ 0.79
NR1H3-231ENST00000529540 HIRIP3Q9BW71 556 aaPredicted RBP19.99■□□□□ 0.79
NR1H3-231ENST00000529540 EVC2Q86UK5 1308 aa19.97■□□□□ 0.79
NR1H3-231ENST00000529540 ANP32CO43423 234 aa19.96■□□□□ 0.79
NR1H3-231ENST00000529540 PUS7Q96PZ0 661 aaKnown RBP19.96■□□□□ 0.79
NR1H3-231ENST00000529540 NCOA3Q9Y6Q9 1424 aa19.96■□□□□ 0.79
NR1H3-231ENST00000529540 FKBP8Q14318 412 aa19.95■□□□□ 0.78
NR1H3-231ENST00000529540 WAPLQ7Z5K2 1190 aa19.94■□□□□ 0.78
NR1H3-231ENST00000529540 ADGRB2O60241 1585 aa19.94■□□□□ 0.78
NR1H3-231ENST00000529540 PLEKHH1Q9ULM0 1364 aa19.93■□□□□ 0.78
NR1H3-231ENST00000529540 SAFB2Q14151 953 aaKnown RBP eCLIP19.93■□□□□ 0.78
NR1H3-231ENST00000529540 NEFLP07196 543 aa19.92■□□□□ 0.78
NR1H3-231ENST00000529540 CCDC7Q96M83 1385 aa19.92■□□□□ 0.78
NR1H3-231ENST00000529540 MINK1Q8N4C8 1332 aaPredicted RBP19.91■□□□□ 0.78
NR1H3-231ENST00000529540 PROSER2Q86WR7 435 aaPredicted RBP19.91■□□□□ 0.78
NR1H3-231ENST00000529540 DISP3Q9P2K9 1392 aa19.9■□□□□ 0.78
NR1H3-231ENST00000529540 KIF7Q2M1P5 1343 aa19.9■□□□□ 0.78
NR1H3-231ENST00000529540 WASHC2AQ641Q2 1341 aa19.89■□□□□ 0.78
NR1H3-231ENST00000529540 TULP4Q9NRJ4 1543 aa19.89■□□□□ 0.77
NR1H3-231ENST00000529540 ADGRL3Q9HAR2 1447 aa19.89■□□□□ 0.77
NR1H3-231ENST00000529540 ATAD2Q6PL18 1390 aa19.88■□□□□ 0.77
NR1H3-231ENST00000529540 WASLO00401 505 aaPredicted RBP19.87■□□□□ 0.77
NR1H3-231ENST00000529540 NINLQ9Y2I6 1382 aa19.87■□□□□ 0.77
NR1H3-231ENST00000529540 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.87■□□□□ 0.77
NR1H3-231ENST00000529540 ZNF335Q9H4Z2 1342 aaPredicted RBP19.86■□□□□ 0.77
NR1H3-231ENST00000529540 CDC42BPGQ6DT37 1551 aa19.86■□□□□ 0.77
NR1H3-231ENST00000529540 SRPK2P78362 688 aaKnown RBP19.86■□□□□ 0.77
NR1H3-231ENST00000529540 STRCP1A6NGW2 1772 aa19.85■□□□□ 0.77
NR1H3-231ENST00000529540 C11orf95C9JLR9 678 aaPredicted RBP19.85■□□□□ 0.77
NR1H3-231ENST00000529540 C14orf37Q86TY3 774 aa19.85■□□□□ 0.77
NR1H3-231ENST00000529540 DCCP43146 1447 aa19.85■□□□□ 0.77
NR1H3-231ENST00000529540 CDK19Q9BWU1 502 aa19.84■□□□□ 0.77
NR1H3-231ENST00000529540 TMEM94Q12767 1356 aa19.84■□□□□ 0.77
NR1H3-231ENST00000529540 POLR3GLQ9BT43 218 aa19.83■□□□□ 0.76
NR1H3-231ENST00000529540 C19orf44Q9H6X5 657 aa19.83■□□□□ 0.76
NR1H3-231ENST00000529540 NALCNQ8IZF0 1738 aa19.83■□□□□ 0.76
NR1H3-231ENST00000529540 LRRC7Q96NW7 1537 aa19.82■□□□□ 0.76
NR1H3-231ENST00000529540 MSH6P52701 1360 aa19.81■□□□□ 0.76
NR1H3-231ENST00000529540 ANKARQ7Z5J8 1434 aa19.81■□□□□ 0.76
NR1H3-231ENST00000529540 CABP2Q9NPB3 220 aa19.79■□□□□ 0.76
NR1H3-231ENST00000529540 FMN2Q9NZ56 1722 aa19.78■□□□□ 0.76
NR1H3-231ENST00000529540 CADPS2Q86UW7 1296 aa19.78■□□□□ 0.76
NR1H3-231ENST00000529540 CCDC61Q9Y6R9 512 aa19.78■□□□□ 0.76
NR1H3-231ENST00000529540 ATF3P18847 181 aa19.77■□□□□ 0.76
NR1H3-231ENST00000529540 ATP7BP35670 1465 aa19.77■□□□□ 0.75
NR1H3-231ENST00000529540 LTBP4Q8N2S1 1624 aa19.76■□□□□ 0.75
NR1H3-231ENST00000529540 NUDT16Q96DE0 195 aaKnown RBP19.76■□□□□ 0.75
NR1H3-231ENST00000529540 ITSN1Q15811 1721 aa19.75■□□□□ 0.75
NR1H3-231ENST00000529540 MYOM1P52179 1685 aa19.75■□□□□ 0.75
NR1H3-231ENST00000529540 TMC1Q8TDI8 760 aa19.75■□□□□ 0.75
NR1H3-231ENST00000529540 RBM19Q9Y4C8 960 aaKnown RBP19.75■□□□□ 0.75
NR1H3-231ENST00000529540 RBM33Q96EV2 1170 aaKnown RBP19.74■□□□□ 0.75
NR1H3-231ENST00000529540 TERF2IPQ9NYB0 399 aa19.74■□□□□ 0.75
NR1H3-231ENST00000529540 PPIP5K1Q6PFW1 1433 aa19.73■□□□□ 0.75
NR1H3-231ENST00000529540 ANKRD36BQ8N2N9 1353 aa19.72■□□□□ 0.75
NR1H3-231ENST00000529540 XIRP1Q702N8 1843 aaKnown RBP19.72■□□□□ 0.75
NR1H3-231ENST00000529540 TOPAZ1Q8N9V7 1692 aa19.72■□□□□ 0.75
NR1H3-231ENST00000529540 HDGFL2Q7Z4V5 671 aaPredicted RBP19.71■□□□□ 0.75
NR1H3-231ENST00000529540 PRR36Q9H6K5 1346 aa19.7■□□□□ 0.74
NR1H3-231ENST00000529540 PLEKHG3A1L390 1219 aa19.69■□□□□ 0.74
NR1H3-231ENST00000529540 SLC12A5Q9H2X9 1139 aa19.69■□□□□ 0.74
NR1H3-231ENST00000529540 CABP1Q9NZU7 370 aa19.69■□□□□ 0.74
NR1H3-231ENST00000529540 USP32Q8NFA0 1604 aa19.69■□□□□ 0.74
NR1H3-231ENST00000529540 IQSEC2Q5JU85 1478 aa19.69■□□□□ 0.74
NR1H3-231ENST00000529540 ERICH6BQ5W0A0 696 aa19.68■□□□□ 0.74
NR1H3-231ENST00000529540 ZNF692Q9BU19 519 aaPredicted RBP19.68■□□□□ 0.74
NR1H3-231ENST00000529540 PANK3Q9H999 370 aa19.68■□□□□ 0.74
NR1H3-231ENST00000529540 MST1RQ04912 1400 aa19.67■□□□□ 0.74
NR1H3-231ENST00000529540 C1orf167Q5SNV9 1468 aa19.67■□□□□ 0.74
NR1H3-231ENST00000529540 NUTM2FA1L443 756 aa19.65■□□□□ 0.74
NR1H3-231ENST00000529540 KNSTRNQ9Y448 316 aa19.65■□□□□ 0.74
NR1H3-231ENST00000529540 POLR3AO14802 1390 aaPredicted RBP19.65■□□□□ 0.74
NR1H3-231ENST00000529540 KIF1AQ12756 1690 aa19.65■□□□□ 0.74
NR1H3-231ENST00000529540 A0A1W2PP64 1363 aa19.64■□□□□ 0.74
NR1H3-231ENST00000529540 CPSF1Q10570 1443 aaKnown RBP19.64■□□□□ 0.73
NR1H3-231ENST00000529540 PHF8Q9UPP1 1060 aa19.64■□□□□ 0.73
NR1H3-231ENST00000529540 BRD4O60885 1362 aaPredicted RBP19.64■□□□□ 0.73
NR1H3-231ENST00000529540 ESCO1Q5FWF5 840 aa19.63■□□□□ 0.73
NR1H3-231ENST00000529540 CD163L1Q9NR16 1453 aa19.63■□□□□ 0.73
NR1H3-231ENST00000529540 NGDNQ8NEJ9 315 aaKnown RBP19.62■□□□□ 0.73
NR1H3-231ENST00000529540 KTN1Q86UP2 1357 aaKnown RBP19.62■□□□□ 0.73
NR1H3-231ENST00000529540 ACEP12821 1306 aa19.62■□□□□ 0.73
NR1H3-231ENST00000529540 NPC1L1Q9UHC9 1359 aa19.62■□□□□ 0.73
NR1H3-231ENST00000529540 EDC4Q6P2E9 1401 aaKnown RBP19.61■□□□□ 0.73
NR1H3-231ENST00000529540 PER1O15534 1290 aaPredicted RBP19.61■□□□□ 0.73
NR1H3-231ENST00000529540 SLAIN2Q9P270 581 aa19.61■□□□□ 0.73
NR1H3-231ENST00000529540 RGPD8O14715 1765 aaPredicted RBP19.61■□□□□ 0.73
NR1H3-231ENST00000529540 AKAP12Q02952 1782 aa19.6■□□□□ 0.73
NR1H3-231ENST00000529540 NSD3Q9BZ95 1437 aa19.6■□□□□ 0.73
NR1H3-231ENST00000529540 CGNL1Q0VF96 1302 aa19.6■□□□□ 0.73
NR1H3-231ENST00000529540 FANCIQ9NVI1 1328 aa19.6■□□□□ 0.73
NR1H3-231ENST00000529540 HNRNPUQ00839 825 aaKnown RBP eCLIP19.6■□□□□ 0.73
NR1H3-231ENST00000529540 NSD2O96028 1365 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms