RNA–Protein interactions for RNA: ENST00000529216.1

PABPC4-223, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 317 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-223ENST00000529216 TMF1P82094 1093 aa11.46□□□□□ -0.57
PABPC4-223ENST00000529216 WAPLQ7Z5K2 1190 aa11.46□□□□□ -0.57
PABPC4-223ENST00000529216 TULP4Q9NRJ4 1543 aa11.45□□□□□ -0.58
PABPC4-223ENST00000529216 DISP3Q9P2K9 1392 aa11.45□□□□□ -0.58
PABPC4-223ENST00000529216 ADGRL3Q9HAR2 1447 aa11.44□□□□□ -0.58
PABPC4-223ENST00000529216 ZNF335Q9H4Z2 1342 aaPredicted RBP11.44□□□□□ -0.58
PABPC4-223ENST00000529216 SAFB2Q14151 953 aaKnown RBP eCLIP11.44□□□□□ -0.58
PABPC4-223ENST00000529216 CDCA8Q53HL2 280 aa11.44□□□□□ -0.58
PABPC4-223ENST00000529216 CCDC7Q96M83 1385 aa11.43□□□□□ -0.58
PABPC4-223ENST00000529216 EVC2Q86UK5 1308 aa11.43□□□□□ -0.58
PABPC4-223ENST00000529216 MINK1Q8N4C8 1332 aaPredicted RBP11.43□□□□□ -0.58
PABPC4-223ENST00000529216 PUS7Q96PZ0 661 aaKnown RBP11.43□□□□□ -0.58
PABPC4-223ENST00000529216 TMEM94Q12767 1356 aa11.42□□□□□ -0.58
PABPC4-223ENST00000529216 CDC42BPGQ6DT37 1551 aa11.42□□□□□ -0.58
PABPC4-223ENST00000529216 KIF7Q2M1P5 1343 aa11.42□□□□□ -0.58
PABPC4-223ENST00000529216 WASHC2AQ641Q2 1341 aa11.42□□□□□ -0.58
PABPC4-223ENST00000529216 STRCP1A6NGW2 1772 aa11.42□□□□□ -0.58
PABPC4-223ENST00000529216 LRRC7Q96NW7 1537 aa11.42□□□□□ -0.58
PABPC4-223ENST00000529216 MSH5O43196 834 aa11.42□□□□□ -0.58
PABPC4-223ENST00000529216 PROSER2Q86WR7 435 aaPredicted RBP11.42□□□□□ -0.58
PABPC4-223ENST00000529216 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.42□□□□□ -0.58
PABPC4-223ENST00000529216 DCCP43146 1447 aa11.42□□□□□ -0.58
PABPC4-223ENST00000529216 C11orf95C9JLR9 678 aaPredicted RBP11.41□□□□□ -0.58
PABPC4-223ENST00000529216 ATAD2Q6PL18 1390 aa11.41□□□□□ -0.58
PABPC4-223ENST00000529216 NALCNQ8IZF0 1738 aa11.4□□□□□ -0.58
PABPC4-223ENST00000529216 LTBP4Q8N2S1 1624 aa11.4□□□□□ -0.58
PABPC4-223ENST00000529216 WASLO00401 505 aaPredicted RBP11.4□□□□□ -0.58
PABPC4-223ENST00000529216 ANKARQ7Z5J8 1434 aa11.39□□□□□ -0.59
PABPC4-223ENST00000529216 NINLQ9Y2I6 1382 aa11.39□□□□□ -0.59
PABPC4-223ENST00000529216 SRPK2P78362 688 aaKnown RBP11.38□□□□□ -0.59
PABPC4-223ENST00000529216 CDK19Q9BWU1 502 aa11.38□□□□□ -0.59
PABPC4-223ENST00000529216 C19orf44Q9H6X5 657 aa11.38□□□□□ -0.59
PABPC4-223ENST00000529216 ATP7BP35670 1465 aa11.38□□□□□ -0.59
PABPC4-223ENST00000529216 C14orf37Q86TY3 774 aa11.37□□□□□ -0.59
PABPC4-223ENST00000529216 RBM33Q96EV2 1170 aaKnown RBP11.37□□□□□ -0.59
PABPC4-223ENST00000529216 CABP2Q9NPB3 220 aa11.37□□□□□ -0.59
PABPC4-223ENST00000529216 MSH6P52701 1360 aa11.37□□□□□ -0.59
PABPC4-223ENST00000529216 FMN2Q9NZ56 1722 aa11.35□□□□□ -0.59
PABPC4-223ENST00000529216 POLR3GLQ9BT43 218 aa11.35□□□□□ -0.59
PABPC4-223ENST00000529216 MYOM1P52179 1685 aa11.35□□□□□ -0.59
PABPC4-223ENST00000529216 PRR36Q9H6K5 1346 aa11.35□□□□□ -0.59
PABPC4-223ENST00000529216 CADPS2Q86UW7 1296 aa11.34□□□□□ -0.59
PABPC4-223ENST00000529216 NUDT16Q96DE0 195 aaKnown RBP11.34□□□□□ -0.59
PABPC4-223ENST00000529216 USP32Q8NFA0 1604 aa11.34□□□□□ -0.59
PABPC4-223ENST00000529216 TOPAZ1Q8N9V7 1692 aa11.33□□□□□ -0.6
PABPC4-223ENST00000529216 ATF3P18847 181 aa11.33□□□□□ -0.6
PABPC4-223ENST00000529216 CCDC61Q9Y6R9 512 aa11.33□□□□□ -0.6
PABPC4-223ENST00000529216 MST1RQ04912 1400 aa11.33□□□□□ -0.6
PABPC4-223ENST00000529216 PPIP5K1Q6PFW1 1433 aa11.33□□□□□ -0.6
PABPC4-223ENST00000529216 IQSEC2Q5JU85 1478 aa11.32□□□□□ -0.6
PABPC4-223ENST00000529216 ANKRD36BQ8N2N9 1353 aa11.32□□□□□ -0.6
PABPC4-223ENST00000529216 XIRP1Q702N8 1843 aaKnown RBP11.32□□□□□ -0.6
PABPC4-223ENST00000529216 C1orf167Q5SNV9 1468 aa11.32□□□□□ -0.6
PABPC4-223ENST00000529216 DDX10Q13206 875 aaKnown RBP11.31□□□□□ -0.6
PABPC4-223ENST00000529216 CD163L1Q9NR16 1453 aa11.31□□□□□ -0.6
PABPC4-223ENST00000529216 ITSN1Q15811 1721 aa11.3□□□□□ -0.6
PABPC4-223ENST00000529216 CPSF1Q10570 1443 aaKnown RBP11.3□□□□□ -0.6
PABPC4-223ENST00000529216 PLEKHG3A1L390 1219 aa11.3□□□□□ -0.6
PABPC4-223ENST00000529216 TMC1Q8TDI8 760 aa11.3□□□□□ -0.6
PABPC4-223ENST00000529216 SLC12A5Q9H2X9 1139 aa11.3□□□□□ -0.6
PABPC4-223ENST00000529216 TERF2IPQ9NYB0 399 aa11.3□□□□□ -0.6
PABPC4-223ENST00000529216 CABP1Q9NZU7 370 aa11.3□□□□□ -0.6
PABPC4-223ENST00000529216 A0A1W2PP64 1363 aa11.29□□□□□ -0.6
PABPC4-223ENST00000529216 POLR3AO14802 1390 aaPredicted RBP11.29□□□□□ -0.6
PABPC4-223ENST00000529216 NUTM2FA1L443 756 aa11.29□□□□□ -0.6
PABPC4-223ENST00000529216 HDGFL2Q7Z4V5 671 aaPredicted RBP11.28□□□□□ -0.6
PABPC4-223ENST00000529216 PANK3Q9H999 370 aa11.28□□□□□ -0.6
PABPC4-223ENST00000529216 KIF1AQ12756 1690 aa11.27□□□□□ -0.6
PABPC4-223ENST00000529216 ZNF692Q9BU19 519 aaPredicted RBP11.27□□□□□ -0.61
PABPC4-223ENST00000529216 PHF8Q9UPP1 1060 aa11.27□□□□□ -0.61
PABPC4-223ENST00000529216 EDC4Q6P2E9 1401 aaKnown RBP11.26□□□□□ -0.61
PABPC4-223ENST00000529216 PER1O15534 1290 aaPredicted RBP11.26□□□□□ -0.61
PABPC4-223ENST00000529216 ESCO1Q5FWF5 840 aa11.26□□□□□ -0.61
PABPC4-223ENST00000529216 SLAIN2Q9P270 581 aa11.26□□□□□ -0.61
PABPC4-223ENST00000529216 ACEP12821 1306 aa11.26□□□□□ -0.61
PABPC4-223ENST00000529216 BRD4O60885 1362 aaPredicted RBP11.26□□□□□ -0.61
PABPC4-223ENST00000529216 KTN1Q86UP2 1357 aaKnown RBP11.26□□□□□ -0.61
PABPC4-223ENST00000529216 USP6P35125 1406 aa11.26□□□□□ -0.61
PABPC4-223ENST00000529216 NSD3Q9BZ95 1437 aa11.26□□□□□ -0.61
PABPC4-223ENST00000529216 NGDNQ8NEJ9 315 aaKnown RBP11.25□□□□□ -0.61
PABPC4-223ENST00000529216 ORAI2Q96SN7 254 aa11.25□□□□□ -0.61
PABPC4-223ENST00000529216 CARD14Q9BXL6 1004 aa11.25□□□□□ -0.61
PABPC4-223ENST00000529216 NPC1L1Q9UHC9 1359 aa11.25□□□□□ -0.61
PABPC4-223ENST00000529216 DIEXFQ68CQ4 756 aaKnown RBP11.24□□□□□ -0.61
PABPC4-223ENST00000529216 BRINP3Q76B58 766 aa11.24□□□□□ -0.61
PABPC4-223ENST00000529216 PMFBP1Q8TBY8 1022 aa11.24□□□□□ -0.61
PABPC4-223ENST00000529216 CERKQ8TCT0 537 aa11.24□□□□□ -0.61
PABPC4-223ENST00000529216 KNSTRNQ9Y448 316 aa11.24□□□□□ -0.61
PABPC4-223ENST00000529216 SSH2Q76I76 1423 aa11.24□□□□□ -0.61
PABPC4-223ENST00000529216 NRKQ7Z2Y5 1582 aa11.24□□□□□ -0.61
PABPC4-223ENST00000529216 CGNL1Q0VF96 1302 aa11.23□□□□□ -0.61
PABPC4-223ENST00000529216 NSD2O96028 1365 aa11.23□□□□□ -0.61
PABPC4-223ENST00000529216 MON2Q7Z3U7 1717 aa11.23□□□□□ -0.61
PABPC4-223ENST00000529216 TOM1O60784 492 aa11.22□□□□□ -0.61
PABPC4-223ENST00000529216 AKAP12Q02952 1782 aa11.22□□□□□ -0.61
PABPC4-223ENST00000529216 AMER1Q5JTC6 1135 aaPredicted RBP11.22□□□□□ -0.61
PABPC4-223ENST00000529216 NPHP3Q7Z494 1330 aa11.22□□□□□ -0.61
PABPC4-223ENST00000529216 TTC21AQ8NDW8 1320 aa11.21□□□□□ -0.61
PABPC4-223ENST00000529216 PXDNQ92626 1479 aa11.2□□□□□ -0.62
PABPC4-223ENST00000529216 TTC21BQ7Z4L5 1316 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms