RNA–Protein interactions for RNA: ENST00000529187.1

TMEM136-204, Transcript of transmembrane protein 136, humanhuman

TSL 1 (best) BASIC

Gene TMEM136, Length 3,930 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM136-204ENST00000529187 PRAG1Q86YV5 1406 aa12.72□□□□□ -0.37
TMEM136-204ENST00000529187 COL16A1Q07092 1604 aaPredicted RBP12.72□□□□□ -0.37
TMEM136-204ENST00000529187 SAFB2Q14151 953 aaKnown RBP eCLIP12.72□□□□□ -0.37
TMEM136-204ENST00000529187 RGS17Q9UGC6 210 aaPredicted RBP12.71□□□□□ -0.37
TMEM136-204ENST00000529187 SETD1AO15047 1707 aaKnown RBP12.71□□□□□ -0.37
TMEM136-204ENST00000529187 NALCNQ8IZF0 1738 aa12.71□□□□□ -0.37
TMEM136-204ENST00000529187 MYOM2P54296 1465 aa12.71□□□□□ -0.38
TMEM136-204ENST00000529187 NPHP3Q7Z494 1330 aa12.7□□□□□ -0.38
TMEM136-204ENST00000529187 TECPR2O15040 1411 aa12.7□□□□□ -0.38
TMEM136-204ENST00000529187 ZNF772Q68DY9 489 aaPredicted RBP12.7□□□□□ -0.38
TMEM136-204ENST00000529187 POTEAQ6S8J7 498 aa12.69□□□□□ -0.38
TMEM136-204ENST00000529187 SIRT1Q96EB6 747 aa12.69□□□□□ -0.38
TMEM136-204ENST00000529187 PRAM1Q96QH2 718 aa12.69□□□□□ -0.38
TMEM136-204ENST00000529187 FOXO3O43524 673 aa12.69□□□□□ -0.38
TMEM136-204ENST00000529187 TRAK1Q9UPV9 953 aa12.69□□□□□ -0.38
TMEM136-204ENST00000529187 PLEKHH1Q9ULM0 1364 aa12.68□□□□□ -0.38
TMEM136-204ENST00000529187 IFT172Q9UG01 1749 aa12.68□□□□□ -0.38
TMEM136-204ENST00000529187 ADAMTS2O95450 1211 aa12.67□□□□□ -0.38
TMEM136-204ENST00000529187 C8orf37Q96NL8 207 aa12.67□□□□□ -0.38
TMEM136-204ENST00000529187 SOS2Q07890 1332 aaPredicted RBP12.66□□□□□ -0.38
TMEM136-204ENST00000529187 XPCQ01831 940 aaPredicted RBP12.66□□□□□ -0.38
TMEM136-204ENST00000529187 NRXN1Q9ULB1 1477 aa12.66□□□□□ -0.38
TMEM136-204ENST00000529187 CDC42BPGQ6DT37 1551 aa12.66□□□□□ -0.38
TMEM136-204ENST00000529187 PNPLA6Q8IY17 1366 aa12.66□□□□□ -0.38
TMEM136-204ENST00000529187 NGLY1Q96IV0 654 aa12.66□□□□□ -0.38
TMEM136-204ENST00000529187 LAMC1P11047 1609 aa12.65□□□□□ -0.38
TMEM136-204ENST00000529187 LRP6O75581 1613 aa12.65□□□□□ -0.38
TMEM136-204ENST00000529187 SHPRHQ149N8 1683 aa12.64□□□□□ -0.39
TMEM136-204ENST00000529187 NHSL1Q5SYE7 1610 aa12.64□□□□□ -0.39
TMEM136-204ENST00000529187 AFF2P51816 1311 aa12.64□□□□□ -0.39
TMEM136-204ENST00000529187 PHF8Q9UPP1 1060 aa12.64□□□□□ -0.39
TMEM136-204ENST00000529187 MINK1Q8N4C8 1332 aaPredicted RBP12.63□□□□□ -0.39
TMEM136-204ENST00000529187 HIRIP3Q9BW71 556 aaPredicted RBP12.63□□□□□ -0.39
TMEM136-204ENST00000529187 HAP1P54257 671 aaPredicted RBP12.63□□□□□ -0.39
TMEM136-204ENST00000529187 LMOD2Q6P5Q4 547 aa12.63□□□□□ -0.39
TMEM136-204ENST00000529187 RXRBP28702 533 aa12.62□□□□□ -0.39
TMEM136-204ENST00000529187 KNDC1Q76NI1 1749 aa12.62□□□□□ -0.39
TMEM136-204ENST00000529187 PSME1Q06323 249 aa12.62□□□□□ -0.39
TMEM136-204ENST00000529187 KRT28Q7Z3Y7 464 aa12.61□□□□□ -0.39
TMEM136-204ENST00000529187 EIF3AQ14152 1382 aaKnown RBP12.61□□□□□ -0.39
TMEM136-204ENST00000529187 PLEKHG5O94827 1062 aa12.6□□□□□ -0.39
TMEM136-204ENST00000529187 NEUROD1Q13562 356 aa12.6□□□□□ -0.39
TMEM136-204ENST00000529187 PMFBP1Q8TBY8 1022 aa12.59□□□□□ -0.39
TMEM136-204ENST00000529187 DLC1Q96QB1 1528 aa12.59□□□□□ -0.39
TMEM136-204ENST00000529187 QTRT2Q9H974 415 aaKnown RBP12.59□□□□□ -0.39
TMEM136-204ENST00000529187 NGDNQ8NEJ9 315 aaKnown RBP12.58□□□□□ -0.4
TMEM136-204ENST00000529187 USP21Q9UK80 565 aa12.58□□□□□ -0.4
TMEM136-204ENST00000529187 ADGRB1O14514 1584 aa12.58□□□□□ -0.4
TMEM136-204ENST00000529187 WASLO00401 505 aaPredicted RBP12.57□□□□□ -0.4
TMEM136-204ENST00000529187 GPRASP1Q5JY77 1395 aa12.57□□□□□ -0.4
TMEM136-204ENST00000529187 SPATA31A3Q5VYP0 1347 aa12.57□□□□□ -0.4
TMEM136-204ENST00000529187 RBM6P78332 1123 aaKnown RBP12.56□□□□□ -0.4
TMEM136-204ENST00000529187 SIN3AQ96ST3 1273 aa12.56□□□□□ -0.4
TMEM136-204ENST00000529187 FMN2Q9NZ56 1722 aa12.56□□□□□ -0.4
TMEM136-204ENST00000529187 ANKARQ7Z5J8 1434 aa12.56□□□□□ -0.4
TMEM136-204ENST00000529187 L3MBTL2Q969R5 705 aa12.56□□□□□ -0.4
TMEM136-204ENST00000529187 PXDNQ92626 1479 aa12.56□□□□□ -0.4
TMEM136-204ENST00000529187 TRPC5Q9UL62 973 aaPredicted RBP12.56□□□□□ -0.4
TMEM136-204ENST00000529187 NBPF1Q3BBV0 1214 aa12.55□□□□□ -0.4
TMEM136-204ENST00000529187 KIF1AQ12756 1690 aa12.54□□□□□ -0.4
TMEM136-204ENST00000529187 TRIM26Q12899 539 aaPredicted RBP12.54□□□□□ -0.4
TMEM136-204ENST00000529187 PAK3O75914 559 aaPredicted RBP12.54□□□□□ -0.4
TMEM136-204ENST00000529187 ARHGEF10O15013 1369 aa12.53□□□□□ -0.4
TMEM136-204ENST00000529187 TNS3Q68CZ2 1445 aa12.53□□□□□ -0.4
TMEM136-204ENST00000529187 NUDT16Q96DE0 195 aaKnown RBP12.53□□□□□ -0.4
TMEM136-204ENST00000529187 FNBP4Q8N3X1 1017 aaPredicted RBP12.52□□□□□ -0.4
TMEM136-204ENST00000529187 CDK19Q9BWU1 502 aa12.52□□□□□ -0.4
TMEM136-204ENST00000529187 SRPK2P78362 688 aaKnown RBP12.52□□□□□ -0.41
TMEM136-204ENST00000529187 CENPJQ9HC77 1338 aaPredicted RBP12.52□□□□□ -0.41
TMEM136-204ENST00000529187 SBNO1A3KN83 1393 aa12.52□□□□□ -0.41
TMEM136-204ENST00000529187 CABLES1Q8TDN4 633 aa12.52□□□□□ -0.41
TMEM136-204ENST00000529187 PRR36Q9H6K5 1346 aa12.51□□□□□ -0.41
TMEM136-204ENST00000529187 TULP4Q9NRJ4 1543 aa12.5□□□□□ -0.41
TMEM136-204ENST00000529187 ADGRB2O60241 1585 aa12.5□□□□□ -0.41
TMEM136-204ENST00000529187 CCDC9Q9Y3X0 531 aaKnown RBP12.5□□□□□ -0.41
TMEM136-204ENST00000529187 CCDC61Q9Y6R9 512 aa12.5□□□□□ -0.41
TMEM136-204ENST00000529187 RGPD8O14715 1765 aaPredicted RBP12.49□□□□□ -0.41
TMEM136-204ENST00000529187 CDK12Q9NYV4 1490 aaPredicted RBP12.49□□□□□ -0.41
TMEM136-204ENST00000529187 TONSLQ96HA7 1378 aa12.49□□□□□ -0.41
TMEM136-204ENST00000529187 COL22A1Q8NFW1 1626 aaPredicted RBP12.48□□□□□ -0.41
TMEM136-204ENST00000529187 ROCK2O75116 1388 aaKnown RBP12.48□□□□□ -0.41
TMEM136-204ENST00000529187 UNC5CLQ8IV45 518 aa12.48□□□□□ -0.41
TMEM136-204ENST00000529187 KIAA1210Q9ULL0 1709 aa12.47□□□□□ -0.41
TMEM136-204ENST00000529187 ARHGEF28Q8N1W1 1705 aaKnown RBP12.46□□□□□ -0.41
TMEM136-204ENST00000529187 GJD4Q96KN9 370 aaPredicted RBP12.46□□□□□ -0.41
TMEM136-204ENST00000529187 UPF1Q92900 1129 aaKnown RBP eCLIP12.46□□□□□ -0.42
TMEM136-204ENST00000529187 A0A0G2JS52 829 aa12.45□□□□□ -0.42
TMEM136-204ENST00000529187 MYT1Q01538 1121 aa12.45□□□□□ -0.42
TMEM136-204ENST00000529187 CABP2Q9NPB3 220 aa12.45□□□□□ -0.42
TMEM136-204ENST00000529187 ACEP12821 1306 aa12.45□□□□□ -0.42
TMEM136-204ENST00000529187 RGS12O14924 1447 aa12.45□□□□□ -0.42
TMEM136-204ENST00000529187 EVC2Q86UK5 1308 aa12.45□□□□□ -0.42
TMEM136-204ENST00000529187 USP32Q8NFA0 1604 aa12.45□□□□□ -0.42
TMEM136-204ENST00000529187 ATRNO75882 1429 aa12.45□□□□□ -0.42
TMEM136-204ENST00000529187 ATP7BP35670 1465 aa12.44□□□□□ -0.42
TMEM136-204ENST00000529187 NBPF8Q3BBV2 869 aa12.44□□□□□ -0.42
TMEM136-204ENST00000529187 PRDM11Q9NQV5 511 aa12.44□□□□□ -0.42
TMEM136-204ENST00000529187 BCL9LQ86UU0 1499 aa12.44□□□□□ -0.42
TMEM136-204ENST00000529187 PLEKHG3A1L390 1219 aa12.43□□□□□ -0.42
TMEM136-204ENST00000529187 NUTM2GQ5VZR2 741 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms