RNA–Protein interactions for RNA: ENST00000527875.1

FOXRED1-208, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 3

Gene FOXRED1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-208ENST00000527875 CARD11Q9BXL7 1154 aa24.46■■□□□ 1.51
FOXRED1-208ENST00000527875 SAFB2Q14151 953 aaKnown RBP eCLIP24.45■■□□□ 1.5
FOXRED1-208ENST00000527875 C19orf44Q9H6X5 657 aa24.45■■□□□ 1.5
FOXRED1-208ENST00000527875 QRICH2Q9H0J4 1663 aa24.41■■□□□ 1.5
FOXRED1-208ENST00000527875 UBAP1LF5GYI3 381 aa24.41■■□□□ 1.5
FOXRED1-208ENST00000527875 DCCP43146 1447 aa24.41■■□□□ 1.5
FOXRED1-208ENST00000527875 CDC42BPGQ6DT37 1551 aa24.39■■□□□ 1.5
FOXRED1-208ENST00000527875 ATF3P18847 181 aa24.39■■□□□ 1.49
FOXRED1-208ENST00000527875 EIF3AQ14152 1382 aaKnown RBP24.39■■□□□ 1.49
FOXRED1-208ENST00000527875 TOM1O60784 492 aa24.38■■□□□ 1.49
FOXRED1-208ENST00000527875 ADGRB2O60241 1585 aa24.37■■□□□ 1.49
FOXRED1-208ENST00000527875 MINK1Q8N4C8 1332 aaPredicted RBP24.37■■□□□ 1.49
FOXRED1-208ENST00000527875 CENPJQ9HC77 1338 aaPredicted RBP24.37■■□□□ 1.49
FOXRED1-208ENST00000527875 CADPS2Q86UW7 1296 aa24.37■■□□□ 1.49
FOXRED1-208ENST00000527875 HIRIP3Q9BW71 556 aaPredicted RBP24.35■■□□□ 1.49
FOXRED1-208ENST00000527875 FMN2Q9NZ56 1722 aa24.35■■□□□ 1.49
FOXRED1-208ENST00000527875 SLAIN2Q9P270 581 aa24.32■■□□□ 1.48
FOXRED1-208ENST00000527875 MST1RQ04912 1400 aa24.32■■□□□ 1.48
FOXRED1-208ENST00000527875 USP47Q96K76 1375 aa24.31■■□□□ 1.48
FOXRED1-208ENST00000527875 PIP4K2BP78356 416 aa24.31■■□□□ 1.48
FOXRED1-208ENST00000527875 SCAF1Q9H7N4 1312 aaKnown RBP24.3■■□□□ 1.48
FOXRED1-208ENST00000527875 RGPD8O14715 1765 aaPredicted RBP24.29■■□□□ 1.48
FOXRED1-208ENST00000527875 ROBO1Q9Y6N7 1651 aa24.28■■□□□ 1.48
FOXRED1-208ENST00000527875 C1orf167Q5SNV9 1468 aa24.27■■□□□ 1.48
FOXRED1-208ENST00000527875 ST20-MTHFSA0A0A6YYL1 179 aa24.27■■□□□ 1.48
FOXRED1-208ENST00000527875 NUTM2FA1L443 756 aa24.27■■□□□ 1.48
FOXRED1-208ENST00000527875 WASLO00401 505 aaPredicted RBP24.27■■□□□ 1.48
FOXRED1-208ENST00000527875 USP32Q8NFA0 1604 aa24.25■■□□□ 1.47
FOXRED1-208ENST00000527875 TULP4Q9NRJ4 1543 aa24.25■■□□□ 1.47
FOXRED1-208ENST00000527875 SBNO2Q9Y2G9 1366 aa24.24■■□□□ 1.47
FOXRED1-208ENST00000527875 CDK19Q9BWU1 502 aa24.23■■□□□ 1.47
FOXRED1-208ENST00000527875 ANKARQ7Z5J8 1434 aa24.2■■□□□ 1.46
FOXRED1-208ENST00000527875 EVC2Q86UK5 1308 aa24.2■■□□□ 1.46
FOXRED1-208ENST00000527875 EIF4G2P78344 907 aaKnown RBP eCLIP24.2■■□□□ 1.46
FOXRED1-208ENST00000527875 BRINP3Q76B58 766 aa24.2■■□□□ 1.46
FOXRED1-208ENST00000527875 TESK2Q96S53 571 aa24.2■■□□□ 1.46
FOXRED1-208ENST00000527875 ITSN1Q15811 1721 aa24.19■■□□□ 1.46
FOXRED1-208ENST00000527875 ORAI2Q96SN7 254 aa24.19■■□□□ 1.46
FOXRED1-208ENST00000527875 PRR36Q9H6K5 1346 aa24.18■■□□□ 1.46
FOXRED1-208ENST00000527875 ZEB1P37275 1124 aaPredicted RBP24.18■■□□□ 1.46
FOXRED1-208ENST00000527875 SRPK2P78362 688 aaKnown RBP24.18■■□□□ 1.46
FOXRED1-208ENST00000527875 ESCO1Q5FWF5 840 aa24.18■■□□□ 1.46
FOXRED1-208ENST00000527875 ATP7BP35670 1465 aa24.18■■□□□ 1.46
FOXRED1-208ENST00000527875 HSPA5P11021 654 aaKnown RBP24.17■■□□□ 1.46
FOXRED1-208ENST00000527875 CABP2Q9NPB3 220 aa24.17■■□□□ 1.46
FOXRED1-208ENST00000527875 KIF1AQ12756 1690 aa24.16■■□□□ 1.46
FOXRED1-208ENST00000527875 TOPAZ1Q8N9V7 1692 aa24.16■■□□□ 1.46
FOXRED1-208ENST00000527875 NHSL1Q5SYE7 1610 aa24.15■■□□□ 1.46
FOXRED1-208ENST00000527875 NUDT16Q96DE0 195 aaKnown RBP24.15■■□□□ 1.46
FOXRED1-208ENST00000527875 PHLPP1O60346 1717 aa24.13■■□□□ 1.45
FOXRED1-208ENST00000527875 AHDC1Q5TGY3 1603 aaPredicted RBP24.13■■□□□ 1.45
FOXRED1-208ENST00000527875 SLC24A1O60721 1099 aa24.12■■□□□ 1.45
FOXRED1-208ENST00000527875 PHF8Q9UPP1 1060 aa24.11■■□□□ 1.45
FOXRED1-208ENST00000527875 DISP3Q9P2K9 1392 aa24.11■■□□□ 1.45
FOXRED1-208ENST00000527875 TMF1P82094 1093 aa24.1■■□□□ 1.45
FOXRED1-208ENST00000527875 DDX17Q92841 729 aaKnown RBP24.1■■□□□ 1.45
FOXRED1-208ENST00000527875 CCDC61Q9Y6R9 512 aa24.1■■□□□ 1.45
FOXRED1-208ENST00000527875 HSPA1LP34931 641 aa24.09■■□□□ 1.45
FOXRED1-208ENST00000527875 PMFBP1Q8TBY8 1022 aa24.09■■□□□ 1.45
FOXRED1-208ENST00000527875 PPIP5K1Q6PFW1 1433 aa24.08■■□□□ 1.44
FOXRED1-208ENST00000527875 ATAD2Q6PL18 1390 aa24.07■■□□□ 1.44
FOXRED1-208ENST00000527875 FOXO3O43524 673 aa24.07■■□□□ 1.44
FOXRED1-208ENST00000527875 COL16A1Q07092 1604 aaPredicted RBP24.06■■□□□ 1.44
FOXRED1-208ENST00000527875 NPHP3Q7Z494 1330 aa24.05■■□□□ 1.44
FOXRED1-208ENST00000527875 PUS7Q96PZ0 661 aaKnown RBP24.04■■□□□ 1.44
FOXRED1-208ENST00000527875 PLEKHG3A1L390 1219 aa24.03■■□□□ 1.44
FOXRED1-208ENST00000527875 CABP1Q9NZU7 370 aa24.03■■□□□ 1.44
FOXRED1-208ENST00000527875 PXDNQ92626 1479 aa24.02■■□□□ 1.44
FOXRED1-208ENST00000527875 XPCQ01831 940 aaPredicted RBP24.02■■□□□ 1.44
FOXRED1-208ENST00000527875 NGDNQ8NEJ9 315 aaKnown RBP24.02■■□□□ 1.44
FOXRED1-208ENST00000527875 CDCA8Q53HL2 280 aa24.01■■□□□ 1.43
FOXRED1-208ENST00000527875 ACEP12821 1306 aa24■■□□□ 1.43
FOXRED1-208ENST00000527875 SOS2Q07890 1332 aaPredicted RBP24■■□□□ 1.43
FOXRED1-208ENST00000527875 POLR3AO14802 1390 aaPredicted RBP24■■□□□ 1.43
FOXRED1-208ENST00000527875 AKAP12Q02952 1782 aa23.99■■□□□ 1.43
FOXRED1-208ENST00000527875 PSME1Q06323 249 aa23.99■■□□□ 1.43
FOXRED1-208ENST00000527875 KRT28Q7Z3Y7 464 aa23.99■■□□□ 1.43
FOXRED1-208ENST00000527875 TMC1Q8TDI8 760 aa23.99■■□□□ 1.43
FOXRED1-208ENST00000527875 TRPM3Q9HCF6 1732 aaPredicted RBP23.98■■□□□ 1.43
FOXRED1-208ENST00000527875 MYOM1P52179 1685 aa23.97■■□□□ 1.43
FOXRED1-208ENST00000527875 C11orf95C9JLR9 678 aaPredicted RBP23.96■■□□□ 1.43
FOXRED1-208ENST00000527875 SLC12A5Q9H2X9 1139 aa23.96■■□□□ 1.43
FOXRED1-208ENST00000527875 LRRC59Q96AG4 307 aaKnown RBP23.95■■□□□ 1.42
FOXRED1-208ENST00000527875 POLR3GLQ9BT43 218 aa23.95■■□□□ 1.42
FOXRED1-208ENST00000527875 MON2Q7Z3U7 1717 aa23.93■■□□□ 1.42
FOXRED1-208ENST00000527875 NINLQ9Y2I6 1382 aa23.93■■□□□ 1.42
FOXRED1-208ENST00000527875 SHPRHQ149N8 1683 aa23.93■■□□□ 1.42
FOXRED1-208ENST00000527875 CD163L1Q9NR16 1453 aa23.93■■□□□ 1.42
FOXRED1-208ENST00000527875 CPSF1Q10570 1443 aaKnown RBP23.92■■□□□ 1.42
FOXRED1-208ENST00000527875 SBNO1A3KN83 1393 aa23.91■■□□□ 1.42
FOXRED1-208ENST00000527875 USP6P35125 1406 aa23.91■■□□□ 1.42
FOXRED1-208ENST00000527875 TNS3Q68CZ2 1445 aa23.91■■□□□ 1.42
FOXRED1-208ENST00000527875 JCADQ9P266 1359 aa23.91■■□□□ 1.42
FOXRED1-208ENST00000527875 SPATA31A3Q5VYP0 1347 aa23.9■■□□□ 1.42
FOXRED1-208ENST00000527875 ALS2Q96Q42 1657 aa23.9■■□□□ 1.42
FOXRED1-208ENST00000527875 PAK3O75914 559 aaPredicted RBP23.89■■□□□ 1.41
FOXRED1-208ENST00000527875 ZNF692Q9BU19 519 aaPredicted RBP23.89■■□□□ 1.41
FOXRED1-208ENST00000527875 TERF2IPQ9NYB0 399 aa23.89■■□□□ 1.41
FOXRED1-208ENST00000527875 KTN1Q86UP2 1357 aaKnown RBP23.89■■□□□ 1.41
FOXRED1-208ENST00000527875 KIF7Q2M1P5 1343 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms