RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 RPGRIP1LQ68CZ1 1315 aa17.63■□□□□ 0.41
CAPN1-204ENST00000526468 UPF1Q92900 1129 aaKnown RBP eCLIP17.61■□□□□ 0.41
CAPN1-204ENST00000526468 PXDNQ92626 1479 aa17.61■□□□□ 0.41
CAPN1-204ENST00000526468 PLCH1Q4KWH8 1693 aa17.59■□□□□ 0.41
CAPN1-204ENST00000526468 TECPR2O15040 1411 aa17.59■□□□□ 0.41
CAPN1-204ENST00000526468 SPATA31E1Q6ZUB1 1445 aa17.59■□□□□ 0.41
CAPN1-204ENST00000526468 ADAMTS2O95450 1211 aa17.59■□□□□ 0.41
CAPN1-204ENST00000526468 FOXD1Q16676 465 aa17.59■□□□□ 0.41
CAPN1-204ENST00000526468 ORAI2Q96SN7 254 aa17.59■□□□□ 0.41
CAPN1-204ENST00000526468 MYOM2P54296 1465 aa17.58■□□□□ 0.41
CAPN1-204ENST00000526468 SOS2Q07890 1332 aaPredicted RBP17.58■□□□□ 0.4
CAPN1-204ENST00000526468 BRWD3Q6RI45 1802 aa17.58■□□□□ 0.4
CAPN1-204ENST00000526468 USP32Q8NFA0 1604 aa17.58■□□□□ 0.4
CAPN1-204ENST00000526468 PIK3C2GO75747 1445 aa17.57■□□□□ 0.4
CAPN1-204ENST00000526468 RBM6P78332 1123 aaKnown RBP17.56■□□□□ 0.4
CAPN1-204ENST00000526468 NGLY1Q96IV0 654 aa17.55■□□□□ 0.4
CAPN1-204ENST00000526468 ANKRD30BQ9BXX2 1392 aa17.54■□□□□ 0.4
CAPN1-204ENST00000526468 NPHP3Q7Z494 1330 aa17.54■□□□□ 0.4
CAPN1-204ENST00000526468 ADGRF5Q8IZF2 1346 aa17.54■□□□□ 0.4
CAPN1-204ENST00000526468 QTRT2Q9H974 415 aaKnown RBP17.54■□□□□ 0.4
CAPN1-204ENST00000526468 LRPPRCP42704 1394 aaKnown RBP17.53■□□□□ 0.4
CAPN1-204ENST00000526468 NWD2Q9ULI1 1742 aa17.53■□□□□ 0.4
CAPN1-204ENST00000526468 EP400Q96L91 3159 aa17.52■□□□□ 0.4
CAPN1-204ENST00000526468 ESCO1Q5FWF5 840 aa17.52■□□□□ 0.4
CAPN1-204ENST00000526468 ATRNO75882 1429 aa17.52■□□□□ 0.4
CAPN1-204ENST00000526468 ATAD2Q6PL18 1390 aa17.52■□□□□ 0.39
CAPN1-204ENST00000526468 YTHDC2Q9H6S0 1430 aaKnown RBP17.51■□□□□ 0.39
CAPN1-204ENST00000526468 STK26Q9P289 416 aa17.51■□□□□ 0.39
CAPN1-204ENST00000526468 USP21Q9UK80 565 aa17.51■□□□□ 0.39
CAPN1-204ENST00000526468 PLEKHH1Q9ULM0 1364 aa17.51■□□□□ 0.39
CAPN1-204ENST00000526468 XPCQ01831 940 aaPredicted RBP17.5■□□□□ 0.39
CAPN1-204ENST00000526468 RGL3Q3MIN7 710 aa17.5■□□□□ 0.39
CAPN1-204ENST00000526468 ADGRB2O60241 1585 aa17.49■□□□□ 0.39
CAPN1-204ENST00000526468 ITSN1Q15811 1721 aa17.49■□□□□ 0.39
CAPN1-204ENST00000526468 GLI3P10071 1580 aa17.49■□□□□ 0.39
CAPN1-204ENST00000526468 NUTM2FA1L443 756 aa17.48■□□□□ 0.39
CAPN1-204ENST00000526468 TRPC5Q9UL62 973 aaPredicted RBP17.48■□□□□ 0.39
CAPN1-204ENST00000526468 NRXN1Q9ULB1 1477 aa17.48■□□□□ 0.39
CAPN1-204ENST00000526468 WAPLQ7Z5K2 1190 aa17.47■□□□□ 0.39
CAPN1-204ENST00000526468 MPHOSPH9Q99550 1183 aa17.47■□□□□ 0.39
CAPN1-204ENST00000526468 ABCC11Q96J66 1382 aa17.47■□□□□ 0.39
CAPN1-204ENST00000526468 TRPM3Q9HCF6 1732 aaPredicted RBP17.47■□□□□ 0.39
CAPN1-204ENST00000526468 NRAPQ86VF7 1730 aa17.46■□□□□ 0.39
CAPN1-204ENST00000526468 ARHGEF28Q8N1W1 1705 aaKnown RBP17.46■□□□□ 0.39
CAPN1-204ENST00000526468 FOXO3O43524 673 aa17.45■□□□□ 0.38
CAPN1-204ENST00000526468 TMEM132EQ6IEE7 984 aa17.45■□□□□ 0.38
CAPN1-204ENST00000526468 BCL9LQ86UU0 1499 aa17.44■□□□□ 0.38
CAPN1-204ENST00000526468 DLC1Q96QB1 1528 aa17.44■□□□□ 0.38
CAPN1-204ENST00000526468 ALS2Q96Q42 1657 aa17.44■□□□□ 0.38
CAPN1-204ENST00000526468 TNS3Q68CZ2 1445 aa17.44■□□□□ 0.38
CAPN1-204ENST00000526468 CRYBG1Q9Y4K1 1723 aa17.44■□□□□ 0.38
CAPN1-204ENST00000526468 FNBP4Q8N3X1 1017 aaPredicted RBP17.43■□□□□ 0.38
CAPN1-204ENST00000526468 SLIT2O94813 1529 aa17.42■□□□□ 0.38
CAPN1-204ENST00000526468 RALGAPBQ86X10 1494 aa17.41■□□□□ 0.38
CAPN1-204ENST00000526468 ADGRB1O14514 1584 aa17.4■□□□□ 0.38
CAPN1-204ENST00000526468 SPATA31A3Q5VYP0 1347 aa17.39■□□□□ 0.37
CAPN1-204ENST00000526468 COL14A1Q05707 1796 aaKnown RBP17.38■□□□□ 0.37
CAPN1-204ENST00000526468 DHX57Q6P158 1386 aaKnown RBP17.38■□□□□ 0.37
CAPN1-204ENST00000526468 ANKARQ7Z5J8 1434 aa17.37■□□□□ 0.37
CAPN1-204ENST00000526468 PHRF1Q9P1Y6 1649 aaKnown RBP17.36■□□□□ 0.37
CAPN1-204ENST00000526468 HAP1P54257 671 aaPredicted RBP17.36■□□□□ 0.37
CAPN1-204ENST00000526468 SAFB2Q14151 953 aaKnown RBP eCLIP17.36■□□□□ 0.37
CAPN1-204ENST00000526468 RAB3GAP2Q9H2M9 1393 aa17.36■□□□□ 0.37
CAPN1-204ENST00000526468 TULP4Q9NRJ4 1543 aa17.36■□□□□ 0.37
CAPN1-204ENST00000526468 TOPAZ1Q8N9V7 1692 aa17.36■□□□□ 0.37
CAPN1-204ENST00000526468 RGPD1P0DJD0 1748 aa17.35■□□□□ 0.37
CAPN1-204ENST00000526468 ARHGEF10O15013 1369 aa17.34■□□□□ 0.37
CAPN1-204ENST00000526468 PLEKHG5O94827 1062 aa17.34■□□□□ 0.37
CAPN1-204ENST00000526468 CFAP70Q5T0N1 1121 aa17.34■□□□□ 0.37
CAPN1-204ENST00000526468 GJD4Q96KN9 370 aaPredicted RBP17.34■□□□□ 0.37
CAPN1-204ENST00000526468 C14orf93Q9H972 538 aaKnown RBP17.34■□□□□ 0.37
CAPN1-204ENST00000526468 ACIN1Q9UKV3 1341 aaKnown RBP17.34■□□□□ 0.37
CAPN1-204ENST00000526468 PHF8Q9UPP1 1060 aa17.34■□□□□ 0.37
CAPN1-204ENST00000526468 KRT28Q7Z3Y7 464 aa17.33■□□□□ 0.36
CAPN1-204ENST00000526468 PRAM1Q96QH2 718 aa17.33■□□□□ 0.36
CAPN1-204ENST00000526468 SBNO1A3KN83 1393 aa17.32■□□□□ 0.36
CAPN1-204ENST00000526468 UNC5CLQ8IV45 518 aa17.32■□□□□ 0.36
CAPN1-204ENST00000526468 KIAA1210Q9ULL0 1709 aa17.32■□□□□ 0.36
CAPN1-204ENST00000526468 SRCAPQ6ZRS2 3230 aa17.3■□□□□ 0.36
CAPN1-204ENST00000526468 TNS1Q9HBL0 1735 aaKnown RBP17.3■□□□□ 0.36
CAPN1-204ENST00000526468 EIF3AQ14152 1382 aaKnown RBP17.3■□□□□ 0.36
CAPN1-204ENST00000526468 PSME1Q06323 249 aa17.3■□□□□ 0.36
CAPN1-204ENST00000526468 LMOD2Q6P5Q4 547 aa17.3■□□□□ 0.36
CAPN1-204ENST00000526468 SIRT1Q96EB6 747 aa17.3■□□□□ 0.36
CAPN1-204ENST00000526468 POGKQ9P215 609 aa17.3■□□□□ 0.36
CAPN1-204ENST00000526468 BLMP54132 1417 aaPredicted RBP17.3■□□□□ 0.36
CAPN1-204ENST00000526468 CABLES1Q8TDN4 633 aa17.29■□□□□ 0.36
CAPN1-204ENST00000526468 THSD7AQ9UPZ6 1657 aa17.27■□□□□ 0.36
CAPN1-204ENST00000526468 ZRANB1Q9UGI0 708 aa17.27■□□□□ 0.36
CAPN1-204ENST00000526468 CCDC9Q9Y3X0 531 aaKnown RBP17.27■□□□□ 0.36
CAPN1-204ENST00000526468 LRP5O75197 1615 aa17.27■□□□□ 0.36
CAPN1-204ENST00000526468 PMFBP1Q8TBY8 1022 aa17.26■□□□□ 0.35
CAPN1-204ENST00000526468 ATP7BP35670 1465 aa17.25■□□□□ 0.35
CAPN1-204ENST00000526468 MINK1Q8N4C8 1332 aaPredicted RBP17.25■□□□□ 0.35
CAPN1-204ENST00000526468 CCDC125Q86Z20 511 aa17.25■□□□□ 0.35
CAPN1-204ENST00000526468 HIRIP3Q9BW71 556 aaPredicted RBP17.25■□□□□ 0.35
CAPN1-204ENST00000526468 QRICH2Q9H0J4 1663 aa17.25■□□□□ 0.35
CAPN1-204ENST00000526468 GPRASP1Q5JY77 1395 aa17.25■□□□□ 0.35
CAPN1-204ENST00000526468 VPS72Q15906 364 aa17.24■□□□□ 0.35
CAPN1-204ENST00000526468 TRAK1Q9UPV9 953 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms