RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 RPGRIP1LQ68CZ1 1315 aa10.82□□□□□ -0.68
CHD7-202ENST00000524602 YEATS2Q9ULM3 1422 aa10.82□□□□□ -0.68
CHD7-202ENST00000524602 CAMSAP1Q5T5Y3 1602 aa10.82□□□□□ -0.68
CHD7-202ENST00000524602 CENPJQ9HC77 1338 aaPredicted RBP10.82□□□□□ -0.68
CHD7-202ENST00000524602 ADGRB1O14514 1584 aa10.82□□□□□ -0.68
CHD7-202ENST00000524602 NOS1P29475 1434 aa10.82□□□□□ -0.68
CHD7-202ENST00000524602 SHPRHQ149N8 1683 aa10.82□□□□□ -0.68
CHD7-202ENST00000524602 NPM2Q86SE8 214 aaKnown RBP10.81□□□□□ -0.68
CHD7-202ENST00000524602 CARD14Q9BXL6 1004 aa10.81□□□□□ -0.68
CHD7-202ENST00000524602 PUS7Q96PZ0 661 aaKnown RBP10.81□□□□□ -0.68
CHD7-202ENST00000524602 SIGLEC1Q9BZZ2 1709 aa10.81□□□□□ -0.68
CHD7-202ENST00000524602 PPM1GO15355 546 aaPredicted RBP10.81□□□□□ -0.68
CHD7-202ENST00000524602 APAF1O14727 1248 aa10.8□□□□□ -0.68
CHD7-202ENST00000524602 C14orf93Q9H972 538 aaKnown RBP10.8□□□□□ -0.68
CHD7-202ENST00000524602 VIRMAQ69YN4 1812 aaKnown RBP10.79□□□□□ -0.68
CHD7-202ENST00000524602 EIF5BO60841 1220 aaKnown RBP10.79□□□□□ -0.68
CHD7-202ENST00000524602 FAM161AQ3B820 660 aa10.79□□□□□ -0.68
CHD7-202ENST00000524602 NCBP3Q53F19 620 aaKnown RBP10.79□□□□□ -0.68
CHD7-202ENST00000524602 CCDC146Q8IYE0 955 aa10.79□□□□□ -0.68
CHD7-202ENST00000524602 PDE3AQ14432 1141 aa10.79□□□□□ -0.68
CHD7-202ENST00000524602 IL27Q8NEV9 243 aa10.79□□□□□ -0.68
CHD7-202ENST00000524602 PIK3C2BO00750 1634 aa10.79□□□□□ -0.68
CHD7-202ENST00000524602 AAMPQ13685 434 aa10.78□□□□□ -0.68
CHD7-202ENST00000524602 CGNL1Q0VF96 1302 aa10.78□□□□□ -0.68
CHD7-202ENST00000524602 NSD3Q9BZ95 1437 aa10.78□□□□□ -0.68
CHD7-202ENST00000524602 NSD2O96028 1365 aa10.78□□□□□ -0.68
CHD7-202ENST00000524602 IQSEC2Q5JU85 1478 aa10.78□□□□□ -0.68
CHD7-202ENST00000524602 DAXXQ9UER7 740 aaPredicted RBP10.78□□□□□ -0.68
CHD7-202ENST00000524602 CHGAP10645 457 aaKnown RBP10.77□□□□□ -0.68
CHD7-202ENST00000524602 ARHGEF28Q8N1W1 1705 aaKnown RBP10.76□□□□□ -0.69
CHD7-202ENST00000524602 SPINK5Q9NQ38 1064 aaPredicted RBP10.76□□□□□ -0.69
CHD7-202ENST00000524602 KIF13AQ9H1H9 1805 aa10.76□□□□□ -0.69
CHD7-202ENST00000524602 MORC1Q86VD1 984 aa10.76□□□□□ -0.69
CHD7-202ENST00000524602 WWC1Q8IX03 1113 aa10.76□□□□□ -0.69
CHD7-202ENST00000524602 RUNDC1Q96C34 613 aa10.75□□□□□ -0.69
CHD7-202ENST00000524602 C8orf34Q49A92 452 aa10.75□□□□□ -0.69
CHD7-202ENST00000524602 CCDC27Q2M243 656 aa10.75□□□□□ -0.69
CHD7-202ENST00000524602 WDR63Q8IWG1 891 aa10.74□□□□□ -0.69
CHD7-202ENST00000524602 PHF23Q9BUL5 403 aaPredicted RBP10.74□□□□□ -0.69
CHD7-202ENST00000524602 ARHGAP31Q2M1Z3 1444 aa10.74□□□□□ -0.69
CHD7-202ENST00000524602 NEXMIFQ5QGS0 1516 aa10.74□□□□□ -0.69
CHD7-202ENST00000524602 ZMYM3Q14202 1370 aa10.74□□□□□ -0.69
CHD7-202ENST00000524602 CFAP53Q96M91 514 aa10.74□□□□□ -0.69
CHD7-202ENST00000524602 ANKRD36BQ8N2N9 1353 aa10.73□□□□□ -0.69
CHD7-202ENST00000524602 BCAR3O75815 825 aa10.73□□□□□ -0.69
CHD7-202ENST00000524602 ZFYVE9O95405 1425 aa10.73□□□□□ -0.69
CHD7-202ENST00000524602 EVC2Q86UK5 1308 aa10.73□□□□□ -0.69
CHD7-202ENST00000524602 NEFMP07197 916 aa10.73□□□□□ -0.69
CHD7-202ENST00000524602 TRAK1Q9UPV9 953 aa10.73□□□□□ -0.69
CHD7-202ENST00000524602 MAPK8IP3Q9UPT6 1336 aa10.73□□□□□ -0.69
CHD7-202ENST00000524602 PREX1Q8TCU6 1659 aa10.72□□□□□ -0.69
CHD7-202ENST00000524602 TULP4Q9NRJ4 1543 aa10.72□□□□□ -0.69
CHD7-202ENST00000524602 VGFO15240 615 aaPredicted RBP10.72□□□□□ -0.69
CHD7-202ENST00000524602 ADGRB2O60241 1585 aa10.72□□□□□ -0.69
CHD7-202ENST00000524602 SKAP1Q86WV1 359 aa10.72□□□□□ -0.69
CHD7-202ENST00000524602 MYO5BQ9ULV0 1848 aa10.71□□□□□ -0.69
CHD7-202ENST00000524602 CLUAP1Q96AJ1 413 aa10.71□□□□□ -0.69
CHD7-202ENST00000524602 SLC12A5Q9H2X9 1139 aa10.71□□□□□ -0.69
CHD7-202ENST00000524602 DMRT2Q9Y5R5 561 aa10.71□□□□□ -0.69
CHD7-202ENST00000524602 CANXP27824 592 aaKnown RBP10.7□□□□□ -0.7
CHD7-202ENST00000524602 LAS1LQ9Y4W2 734 aaKnown RBP10.7□□□□□ -0.7
CHD7-202ENST00000524602 REREQ9P2R6 1566 aa10.7□□□□□ -0.7
CHD7-202ENST00000524602 ANKRD26Q9UPS8 1709 aa10.7□□□□□ -0.7
CHD7-202ENST00000524602 TCP11L2Q8N4U5 519 aa10.7□□□□□ -0.7
CHD7-202ENST00000524602 CT47B1P0C2W7 299 aaPredicted RBP10.69□□□□□ -0.7
CHD7-202ENST00000524602 RARSP54136 660 aaKnown RBP10.69□□□□□ -0.7
CHD7-202ENST00000524602 IDI1Q13907 227 aa10.69□□□□□ -0.7
CHD7-202ENST00000524602 PMFBP1Q8TBY8 1022 aa10.69□□□□□ -0.7
CHD7-202ENST00000524602 CLTCQ00610 1675 aaKnown RBP10.69□□□□□ -0.7
CHD7-202ENST00000524602 NUTM2DQ5VT03 806 aaPredicted RBP10.69□□□□□ -0.7
CHD7-202ENST00000524602 MED14O60244 1454 aa10.69□□□□□ -0.7
CHD7-202ENST00000524602 MYH16Q9H6N6 1097 aa10.68□□□□□ -0.7
CHD7-202ENST00000524602 MTHFSP49914 203 aa10.68□□□□□ -0.7
CHD7-202ENST00000524602 AGLP35573 1532 aa10.68□□□□□ -0.7
CHD7-202ENST00000524602 RGS3P49796 1198 aa10.68□□□□□ -0.7
CHD7-202ENST00000524602 ABCC11Q96J66 1382 aa10.68□□□□□ -0.7
CHD7-202ENST00000524602 TMEM132EQ6IEE7 984 aa10.67□□□□□ -0.7
CHD7-202ENST00000524602 TMEM131LA2VDJ0 1609 aa10.67□□□□□ -0.7
CHD7-202ENST00000524602 IGHDP01880 384 aa10.67□□□□□ -0.7
CHD7-202ENST00000524602 SLC52A1Q9NWF4 448 aa10.67□□□□□ -0.7
CHD7-202ENST00000524602 ARHGEF40Q8TER5 1519 aa10.67□□□□□ -0.7
CHD7-202ENST00000524602 FBXO31Q5XUX0 539 aaPredicted RBP10.66□□□□□ -0.7
CHD7-202ENST00000524602 SENP3Q9H4L4 574 aaPredicted RBP10.66□□□□□ -0.7
CHD7-202ENST00000524602 ATAD2Q6PL18 1390 aa10.66□□□□□ -0.7
CHD7-202ENST00000524602 PANK1Q8TE04 598 aa10.66□□□□□ -0.7
CHD7-202ENST00000524602 COG6Q9Y2V7 657 aa10.66□□□□□ -0.7
CHD7-202ENST00000524602 TNNT2P45379 298 aaPredicted RBP10.65□□□□□ -0.7
CHD7-202ENST00000524602 COL3A1P02461 1466 aaPredicted RBP10.64□□□□□ -0.71
CHD7-202ENST00000524602 NFKBIBQ15653 356 aa10.64□□□□□ -0.71
CHD7-202ENST00000524602 PTPRMP28827 1452 aa10.64□□□□□ -0.71
CHD7-202ENST00000524602 MLECQ14165 292 aa10.64□□□□□ -0.71
CHD7-202ENST00000524602 FRAT1Q92837 279 aaPredicted RBP10.64□□□□□ -0.71
CHD7-202ENST00000524602 NEUROD2Q15784 382 aa10.63□□□□□ -0.71
CHD7-202ENST00000524602 RRP7AQ9Y3A4 280 aaKnown RBP10.63□□□□□ -0.71
CHD7-202ENST00000524602 A0A1W2PP64 1363 aa10.63□□□□□ -0.71
CHD7-202ENST00000524602 RWDD1Q9H446 243 aaPredicted RBP10.63□□□□□ -0.71
CHD7-202ENST00000524602 IL16Q14005 1332 aa10.63□□□□□ -0.71
CHD7-202ENST00000524602 U2AF1L5P0DN76 240 aaPredicted RBP10.63□□□□□ -0.71
CHD7-202ENST00000524602 U2AF1Q01081 240 aaKnown RBP eCLIP10.63□□□□□ -0.71
CHD7-202ENST00000524602 UBE2Q2Q8WVN8 375 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms