RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 FNBP4Q8N3X1 1017 aaPredicted RBP34.32■■■■□ 3.08
PVT1-218ENST00000523328 MYOM2P54296 1465 aa34.29■■■■□ 3.08
PVT1-218ENST00000523328 TRPC5Q9UL62 973 aaPredicted RBP34.29■■■■□ 3.08
PVT1-218ENST00000523328 PXDNQ92626 1479 aa34.28■■■■□ 3.08
PVT1-218ENST00000523328 ATRNO75882 1429 aa34.27■■■■□ 3.08
PVT1-218ENST00000523328 NPHP3Q7Z494 1330 aa34.27■■■■□ 3.08
PVT1-218ENST00000523328 ATAD2Q6PL18 1390 aa34.26■■■■□ 3.08
PVT1-218ENST00000523328 MARF1Q9Y4F3 1742 aaKnown RBP34.26■■■■□ 3.07
PVT1-218ENST00000523328 ESCO1Q5FWF5 840 aa34.25■■■■□ 3.07
PVT1-218ENST00000523328 ADGRF5Q8IZF2 1346 aa34.24■■■■□ 3.07
PVT1-218ENST00000523328 FOXD1Q16676 465 aa34.23■■■■□ 3.07
PVT1-218ENST00000523328 TECPR2O15040 1411 aa34.22■■■■□ 3.07
PVT1-218ENST00000523328 IFT172Q9UG01 1749 aa34.21■■■■□ 3.07
PVT1-218ENST00000523328 BCL9LQ86UU0 1499 aa34.2■■■■□ 3.06
PVT1-218ENST00000523328 FOXO3O43524 673 aa34.19■■■■□ 3.06
PVT1-218ENST00000523328 SPATA31E1Q6ZUB1 1445 aa34.19■■■■□ 3.06
PVT1-218ENST00000523328 KNDC1Q76NI1 1749 aa34.18■■■■□ 3.06
PVT1-218ENST00000523328 CCDC144AA2RUR9 1427 aa34.17■■■■□ 3.06
PVT1-218ENST00000523328 XPCQ01831 940 aaPredicted RBP34.17■■■■□ 3.06
PVT1-218ENST00000523328 LRPPRCP42704 1394 aaKnown RBP34.16■■■■□ 3.06
PVT1-218ENST00000523328 WAPLQ7Z5K2 1190 aa34.16■■■■□ 3.06
PVT1-218ENST00000523328 EP400Q96L91 3159 aa34.15■■■■□ 3.06
PVT1-218ENST00000523328 STK26Q9P289 416 aa34.15■■■■□ 3.06
PVT1-218ENST00000523328 SRCAPQ6ZRS2 3230 aa34.14■■■■□ 3.06
PVT1-218ENST00000523328 ABCC11Q96J66 1382 aa34.13■■■■□ 3.05
PVT1-218ENST00000523328 ANKRD30BQ9BXX2 1392 aa34.13■■■■□ 3.05
PVT1-218ENST00000523328 RGL3Q3MIN7 710 aa34.13■■■■□ 3.05
PVT1-218ENST00000523328 PLEKHH1Q9ULM0 1364 aa34.12■■■■□ 3.05
PVT1-218ENST00000523328 NUTM2FA1L443 756 aa34.12■■■■□ 3.05
PVT1-218ENST00000523328 FMN2Q9NZ56 1722 aa34.12■■■■□ 3.05
PVT1-218ENST00000523328 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.1■■■■□ 3.05
PVT1-218ENST00000523328 PIK3C2GO75747 1445 aa34.1■■■■□ 3.05
PVT1-218ENST00000523328 TMEM132EQ6IEE7 984 aa34.09■■■■□ 3.05
PVT1-218ENST00000523328 KIF1AQ12756 1690 aa34.07■■■■□ 3.04
PVT1-218ENST00000523328 GJD4Q96KN9 370 aaPredicted RBP34.06■■■■□ 3.04
PVT1-218ENST00000523328 MPHOSPH9Q99550 1183 aa34.04■■■■□ 3.04
PVT1-218ENST00000523328 YTHDC2Q9H6S0 1430 aaKnown RBP34.04■■■■□ 3.04
PVT1-218ENST00000523328 SPATA31A3Q5VYP0 1347 aa34.04■■■■□ 3.04
PVT1-218ENST00000523328 SLIT2O94813 1529 aa34.03■■■■□ 3.04
PVT1-218ENST00000523328 RGPD8O14715 1765 aaPredicted RBP34.01■■■■□ 3.04
PVT1-218ENST00000523328 GLI3P10071 1580 aa34.01■■■■□ 3.03
PVT1-218ENST00000523328 CCDC125Q86Z20 511 aa34■■■■□ 3.03
PVT1-218ENST00000523328 USP32Q8NFA0 1604 aa34■■■■□ 3.03
PVT1-218ENST00000523328 UNC5CLQ8IV45 518 aa33.98■■■■□ 3.03
PVT1-218ENST00000523328 RALGAPBQ86X10 1494 aa33.98■■■■□ 3.03
PVT1-218ENST00000523328 SIRT1Q96EB6 747 aa33.97■■■■□ 3.03
PVT1-218ENST00000523328 ZRANB1Q9UGI0 708 aa33.97■■■■□ 3.03
PVT1-218ENST00000523328 KRT28Q7Z3Y7 464 aa33.95■■■■□ 3.03
PVT1-218ENST00000523328 BRWD3Q6RI45 1802 aa33.93■■■■□ 3.02
PVT1-218ENST00000523328 C14orf93Q9H972 538 aaKnown RBP33.93■■■■□ 3.02
PVT1-218ENST00000523328 NRXN1Q9ULB1 1477 aa33.92■■■■□ 3.02
PVT1-218ENST00000523328 TNS3Q68CZ2 1445 aa33.91■■■■□ 3.02
PVT1-218ENST00000523328 PHF8Q9UPP1 1060 aa33.9■■■■□ 3.02
PVT1-218ENST00000523328 ABCA3Q99758 1704 aa33.87■■■■□ 3.01
PVT1-218ENST00000523328 PLCH1Q4KWH8 1693 aa33.87■■■■□ 3.01
PVT1-218ENST00000523328 CFAP70Q5T0N1 1121 aa33.86■■■■□ 3.01
PVT1-218ENST00000523328 NWD2Q9ULI1 1742 aa33.86■■■■□ 3.01
PVT1-218ENST00000523328 BLMP54132 1417 aaPredicted RBP33.86■■■■□ 3.01
PVT1-218ENST00000523328 DHX57Q6P158 1386 aaKnown RBP33.85■■■■□ 3.01
PVT1-218ENST00000523328 PSME1Q06323 249 aa33.84■■■■□ 3.01
PVT1-218ENST00000523328 CABLES1Q8TDN4 633 aa33.84■■■■□ 3.01
PVT1-218ENST00000523328 SBNO1A3KN83 1393 aa33.84■■■■□ 3.01
PVT1-218ENST00000523328 HAP1P54257 671 aaPredicted RBP33.81■■■■□ 3
PVT1-218ENST00000523328 VPS72Q15906 364 aa33.81■■■■□ 3
PVT1-218ENST00000523328 PRAM1Q96QH2 718 aa33.8■■■■□ 3
PVT1-218ENST00000523328 SAFB2Q14151 953 aaKnown RBP eCLIP33.79■■■■□ 3
PVT1-218ENST00000523328 SEPT12Q8IYM1 358 aa33.79■■■■□ 3
PVT1-218ENST00000523328 DLC1Q96QB1 1528 aa33.79■■■■□ 3
PVT1-218ENST00000523328 ARHGEF10O15013 1369 aa33.77■■■■□ 3
PVT1-218ENST00000523328 ONECUT3O60422 494 aaPredicted RBP33.76■■■□□ 2.99
PVT1-218ENST00000523328 ADGRB2O60241 1585 aa33.76■■■□□ 2.99
PVT1-218ENST00000523328 PLEKHG5O94827 1062 aa33.75■■■□□ 2.99
PVT1-218ENST00000523328 DEFB132Q7Z7B7 95 aa33.75■■■□□ 2.99
PVT1-218ENST00000523328 ANKARQ7Z5J8 1434 aa33.75■■■□□ 2.99
PVT1-218ENST00000523328 LMOD2Q6P5Q4 547 aa33.74■■■□□ 2.99
PVT1-218ENST00000523328 ACIN1Q9UKV3 1341 aaKnown RBP33.74■■■□□ 2.99
PVT1-218ENST00000523328 TRPM3Q9HCF6 1732 aaPredicted RBP33.73■■■□□ 2.99
PVT1-218ENST00000523328 PMFBP1Q8TBY8 1022 aa33.72■■■□□ 2.99
PVT1-218ENST00000523328 ADGRB1O14514 1584 aa33.72■■■□□ 2.99
PVT1-218ENST00000523328 NRAPQ86VF7 1730 aa33.7■■■□□ 2.99
PVT1-218ENST00000523328 FAM83GA6ND36 823 aa33.7■■■□□ 2.99
PVT1-218ENST00000523328 POGKQ9P215 609 aa33.7■■■□□ 2.99
PVT1-218ENST00000523328 CCDC9Q9Y3X0 531 aaKnown RBP33.7■■■□□ 2.99
PVT1-218ENST00000523328 ALS2Q96Q42 1657 aa33.68■■■□□ 2.98
PVT1-218ENST00000523328 KRT27Q7Z3Y8 459 aa33.68■■■□□ 2.98
PVT1-218ENST00000523328 SF3B2Q13435 895 aaKnown RBP33.66■■■□□ 2.98
PVT1-218ENST00000523328 HIRIP3Q9BW71 556 aaPredicted RBP33.62■■■□□ 2.97
PVT1-218ENST00000523328 COL14A1Q05707 1796 aaKnown RBP33.62■■■□□ 2.97
PVT1-218ENST00000523328 PRR36Q9H6K5 1346 aa33.61■■■□□ 2.97
PVT1-218ENST00000523328 TRAK1Q9UPV9 953 aa33.61■■■□□ 2.97
PVT1-218ENST00000523328 TULP4Q9NRJ4 1543 aa33.6■■■□□ 2.97
PVT1-218ENST00000523328 CRYBG1Q9Y4K1 1723 aa33.6■■■□□ 2.97
PVT1-218ENST00000523328 BTG4Q9NY30 223 aa33.59■■■□□ 2.97
PVT1-218ENST00000523328 GPRASP1Q5JY77 1395 aa33.58■■■□□ 2.97
PVT1-218ENST00000523328 RAB3GAP2Q9H2M9 1393 aa33.58■■■□□ 2.97
PVT1-218ENST00000523328 MINK1Q8N4C8 1332 aaPredicted RBP33.57■■■□□ 2.97
PVT1-218ENST00000523328 FAM98CQ17RN3 349 aaKnown RBP33.57■■■□□ 2.96
PVT1-218ENST00000523328 EIF3AQ14152 1382 aaKnown RBP33.57■■■□□ 2.96
PVT1-218ENST00000523328 LRP5O75197 1615 aa33.57■■■□□ 2.96
PVT1-218ENST00000523328 A0A0G2JS52 829 aa33.55■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms