RNA–Protein interactions for RNA: ENST00000523313.1

CASC9-204, Transcript of cancer susceptibility 9, humanhuman

TSL 2

Gene CASC9, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-204ENST00000523313 KANK4Q5T7N3 995 aaPredicted RBP13.16□□□□□ -0.3
CASC9-204ENST00000523313 UNC5CLQ8IV45 518 aa13.16□□□□□ -0.3
CASC9-204ENST00000523313 SPHKAPQ2M3C7 1700 aa13.16□□□□□ -0.3
CASC9-204ENST00000523313 EN1Q05925 392 aaPredicted RBP13.14□□□□□ -0.31
CASC9-204ENST00000523313 ANKRD30AQ9BXX3 1397 aa13.14□□□□□ -0.31
CASC9-204ENST00000523313 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.13□□□□□ -0.31
CASC9-204ENST00000523313 MARF1Q9Y4F3 1742 aaKnown RBP13.13□□□□□ -0.31
CASC9-204ENST00000523313 KRT27Q7Z3Y8 459 aa13.13□□□□□ -0.31
CASC9-204ENST00000523313 SLIT2O94813 1529 aa13.13□□□□□ -0.31
CASC9-204ENST00000523313 XPCQ01831 940 aaPredicted RBP13.12□□□□□ -0.31
CASC9-204ENST00000523313 SENP3-EIF4A1A0A087X0R7 540 aa13.1□□□□□ -0.31
CASC9-204ENST00000523313 PXDNQ92626 1479 aa13.1□□□□□ -0.31
CASC9-204ENST00000523313 PTPN23Q9H3S7 1636 aa13.1□□□□□ -0.31
CASC9-204ENST00000523313 ONECUT3O60422 494 aaPredicted RBP13.08□□□□□ -0.32
CASC9-204ENST00000523313 NPHP3Q7Z494 1330 aa13.08□□□□□ -0.32
CASC9-204ENST00000523313 VPS72Q15906 364 aa13.07□□□□□ -0.32
CASC9-204ENST00000523313 CCDC9Q9Y3X0 531 aaKnown RBP13.07□□□□□ -0.32
CASC9-204ENST00000523313 A0A0G2JS52 829 aa13.06□□□□□ -0.32
CASC9-204ENST00000523313 FOXO3O43524 673 aa13.06□□□□□ -0.32
CASC9-204ENST00000523313 MYT1Q01538 1121 aa13.06□□□□□ -0.32
CASC9-204ENST00000523313 ESCO1Q5FWF5 840 aa13.06□□□□□ -0.32
CASC9-204ENST00000523313 ROBO2Q9HCK4 1378 aa13.06□□□□□ -0.32
CASC9-204ENST00000523313 E9PCH4 1651 aa13.05□□□□□ -0.32
CASC9-204ENST00000523313 ANKRD50Q9ULJ7 1429 aa13.05□□□□□ -0.32
CASC9-204ENST00000523313 EZH2Q15910 746 aaKnown RBP13.05□□□□□ -0.32
CASC9-204ENST00000523313 FAM182BQ5T319 152 aa13.05□□□□□ -0.32
CASC9-204ENST00000523313 ADGRL2O95490 1459 aa13.04□□□□□ -0.32
CASC9-204ENST00000523313 ZNF784Q8NCA9 323 aaPredicted RBP13.03□□□□□ -0.32
CASC9-204ENST00000523313 USP32Q8NFA0 1604 aa13.02□□□□□ -0.32
CASC9-204ENST00000523313 ZNF326Q5BKZ1 582 aaKnown RBP13.02□□□□□ -0.33
CASC9-204ENST00000523313 IQGAP3Q86VI3 1631 aa13.02□□□□□ -0.33
CASC9-204ENST00000523313 DCAF8L1A6NGE4 600 aa13.01□□□□□ -0.33
CASC9-204ENST00000523313 FAM98CQ17RN3 349 aaKnown RBP13.01□□□□□ -0.33
CASC9-204ENST00000523313 DISP2A7MBM2 1401 aa13.01□□□□□ -0.33
CASC9-204ENST00000523313 RGPD1P0DJD0 1748 aa13.01□□□□□ -0.33
CASC9-204ENST00000523313 VPS8Q8N3P4 1428 aa13□□□□□ -0.33
CASC9-204ENST00000523313 SPATA31A3Q5VYP0 1347 aa13□□□□□ -0.33
CASC9-204ENST00000523313 PLEKHG5O94827 1062 aa13□□□□□ -0.33
CASC9-204ENST00000523313 PPP1R1BQ9UD71 204 aaPredicted RBP13□□□□□ -0.33
CASC9-204ENST00000523313 NUTM2FA1L443 756 aa12.99□□□□□ -0.33
CASC9-204ENST00000523313 C1QTNF8P60827 252 aa12.99□□□□□ -0.33
CASC9-204ENST00000523313 CABLES1Q8TDN4 633 aa12.99□□□□□ -0.33
CASC9-204ENST00000523313 CAMKK2Q96RR4 588 aa12.99□□□□□ -0.33
CASC9-204ENST00000523313 TNS1Q9HBL0 1735 aaKnown RBP12.99□□□□□ -0.33
CASC9-204ENST00000523313 PLCH1Q4KWH8 1693 aa12.99□□□□□ -0.33
CASC9-204ENST00000523313 CAMTA1Q9Y6Y1 1673 aa12.99□□□□□ -0.33
CASC9-204ENST00000523313 HAP1P54257 671 aaPredicted RBP12.98□□□□□ -0.33
CASC9-204ENST00000523313 LRPPRCP42704 1394 aaKnown RBP12.97□□□□□ -0.33
CASC9-204ENST00000523313 NINLQ9Y2I6 1382 aa12.96□□□□□ -0.33
CASC9-204ENST00000523313 NEXMIFQ5QGS0 1516 aa12.96□□□□□ -0.33
CASC9-204ENST00000523313 NWD2Q9ULI1 1742 aa12.96□□□□□ -0.34
CASC9-204ENST00000523313 CDC42BPGQ6DT37 1551 aa12.95□□□□□ -0.34
CASC9-204ENST00000523313 TRIM37O94972 964 aa12.95□□□□□ -0.34
CASC9-204ENST00000523313 SPON1Q9HCB6 807 aa12.95□□□□□ -0.34
CASC9-204ENST00000523313 HFM1A2PYH4 1435 aa12.95□□□□□ -0.34
CASC9-204ENST00000523313 PRAG1Q86YV5 1406 aa12.95□□□□□ -0.34
CASC9-204ENST00000523313 FAM83GA6ND36 823 aa12.94□□□□□ -0.34
CASC9-204ENST00000523313 KCNQ2O43526 872 aa12.93□□□□□ -0.34
CASC9-204ENST00000523313 KRT28Q7Z3Y7 464 aa12.93□□□□□ -0.34
CASC9-204ENST00000523313 ADGRB2O60241 1585 aa12.92□□□□□ -0.34
CASC9-204ENST00000523313 APBA3O96018 575 aa12.92□□□□□ -0.34
CASC9-204ENST00000523313 CCDC144AA2RUR9 1427 aa12.91□□□□□ -0.34
CASC9-204ENST00000523313 NAIPQ13075 1403 aa12.91□□□□□ -0.34
CASC9-204ENST00000523313 NRAPQ86VF7 1730 aa12.91□□□□□ -0.34
CASC9-204ENST00000523313 TNS3Q68CZ2 1445 aa12.9□□□□□ -0.34
CASC9-204ENST00000523313 FAM50AQ14320 339 aaKnown RBP12.9□□□□□ -0.34
CASC9-204ENST00000523313 BTG4Q9NY30 223 aa12.9□□□□□ -0.34
CASC9-204ENST00000523313 NUP155O75694 1391 aa12.9□□□□□ -0.34
CASC9-204ENST00000523313 PARD3Q8TEW0 1356 aa12.9□□□□□ -0.34
CASC9-204ENST00000523313 NUP188Q5SRE5 1749 aa12.9□□□□□ -0.34
CASC9-204ENST00000523313 RREB1Q92766 1687 aa12.89□□□□□ -0.35
CASC9-204ENST00000523313 NBPF8Q3BBV2 869 aa12.89□□□□□ -0.35
CASC9-204ENST00000523313 NBPF14Q5TI25 921 aa12.89□□□□□ -0.35
CASC9-204ENST00000523313 THSD7AQ9UPZ6 1657 aa12.89□□□□□ -0.35
CASC9-204ENST00000523313 ABCA3Q99758 1704 aa12.88□□□□□ -0.35
CASC9-204ENST00000523313 LMOD2Q6P5Q4 547 aa12.88□□□□□ -0.35
CASC9-204ENST00000523313 SPATA31A5Q5VU36 1347 aa12.88□□□□□ -0.35
CASC9-204ENST00000523313 SPATA31A7Q8IWB4 1347 aa12.88□□□□□ -0.35
CASC9-204ENST00000523313 WAPLQ7Z5K2 1190 aa12.87□□□□□ -0.35
CASC9-204ENST00000523313 UTRNP46939 3433 aa12.86□□□□□ -0.35
CASC9-204ENST00000523313 FAM196AQ6ZSG2 479 aa12.86□□□□□ -0.35
CASC9-204ENST00000523313 CLTCL1P53675 1640 aa12.86□□□□□ -0.35
CASC9-204ENST00000523313 KIF1AQ12756 1690 aa12.85□□□□□ -0.35
CASC9-204ENST00000523313 NRKQ7Z2Y5 1582 aa12.85□□□□□ -0.35
CASC9-204ENST00000523313 PLEKHH1Q9ULM0 1364 aa12.84□□□□□ -0.35
CASC9-204ENST00000523313 VGFO15240 615 aaPredicted RBP12.84□□□□□ -0.35
CASC9-204ENST00000523313 CEP350Q5VT06 3117 aa12.83□□□□□ -0.36
CASC9-204ENST00000523313 PSME1Q06323 249 aa12.83□□□□□ -0.36
CASC9-204ENST00000523313 STK26Q9P289 416 aa12.83□□□□□ -0.36
CASC9-204ENST00000523313 SBNO1A3KN83 1393 aa12.82□□□□□ -0.36
CASC9-204ENST00000523313 ARHGEF10O15013 1369 aa12.82□□□□□ -0.36
CASC9-204ENST00000523313 FMN2Q9NZ56 1722 aa12.82□□□□□ -0.36
CASC9-204ENST00000523313 PDGFDQ9GZP0 370 aaPredicted RBP12.82□□□□□ -0.36
CASC9-204ENST00000523313 PHF8Q9UPP1 1060 aa12.82□□□□□ -0.36
CASC9-204ENST00000523313 GIGYF1O75420 1035 aaPredicted RBP12.81□□□□□ -0.36
CASC9-204ENST00000523313 COL14A1Q05707 1796 aaKnown RBP12.81□□□□□ -0.36
CASC9-204ENST00000523313 MYOM1P52179 1685 aa12.8□□□□□ -0.36
CASC9-204ENST00000523313 ANO8Q9HCE9 1232 aaPredicted RBP12.8□□□□□ -0.36
CASC9-204ENST00000523313 ZBTB7AO95365 584 aa12.79□□□□□ -0.36
CASC9-204ENST00000523313 PTGER2P43116 358 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms