RNA–Protein interactions for RNA: ENST00000523091.5

CHMP7-210, Transcript of charged multivesicular body protein 7, humanhuman

TSL 1 (best)

Gene CHMP7, Length 2,672 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-210ENST00000523091 SLFN5Q08AF3 891 aa19.46■□□□□ 0.71
CHMP7-210ENST00000523091 DMRT2Q9Y5R5 561 aa19.45■□□□□ 0.7
CHMP7-210ENST00000523091 EVC2Q86UK5 1308 aa19.45■□□□□ 0.7
CHMP7-210ENST00000523091 RIMBP3CA6NJZ7 1639 aa19.45■□□□□ 0.7
CHMP7-210ENST00000523091 RIMBP3BA6NNM3 1639 aa19.45■□□□□ 0.7
CHMP7-210ENST00000523091 RIMBP3Q9UFD9 1639 aa19.45■□□□□ 0.7
CHMP7-210ENST00000523091 ARHGEF28Q8N1W1 1705 aaKnown RBP19.44■□□□□ 0.7
CHMP7-210ENST00000523091 TULP4Q9NRJ4 1543 aa19.44■□□□□ 0.7
CHMP7-210ENST00000523091 PREX1Q8TCU6 1659 aa19.43■□□□□ 0.7
CHMP7-210ENST00000523091 POLR3AO14802 1390 aaPredicted RBP19.42■□□□□ 0.7
CHMP7-210ENST00000523091 TMEM131LA2VDJ0 1609 aa19.41■□□□□ 0.7
CHMP7-210ENST00000523091 SKAP1Q86WV1 359 aa19.41■□□□□ 0.7
CHMP7-210ENST00000523091 CGNL1Q0VF96 1302 aa19.41■□□□□ 0.7
CHMP7-210ENST00000523091 DIP2BQ9P265 1576 aa19.4■□□□□ 0.7
CHMP7-210ENST00000523091 MTHFSP49914 203 aa19.4■□□□□ 0.7
CHMP7-210ENST00000523091 TRMT2AQ8IZ69 625 aaKnown RBP19.4■□□□□ 0.7
CHMP7-210ENST00000523091 MLECQ14165 292 aa19.4■□□□□ 0.7
CHMP7-210ENST00000523091 NEUROD2Q15784 382 aa19.39■□□□□ 0.7
CHMP7-210ENST00000523091 SRPK2P78362 688 aaKnown RBP19.39■□□□□ 0.69
CHMP7-210ENST00000523091 MINK1Q8N4C8 1332 aaPredicted RBP19.39■□□□□ 0.69
CHMP7-210ENST00000523091 STAG3Q9UJ98 1225 aa19.38■□□□□ 0.69
CHMP7-210ENST00000523091 RRP7AQ9Y3A4 280 aaKnown RBP19.38■□□□□ 0.69
CHMP7-210ENST00000523091 ZFYVE9O95405 1425 aa19.38■□□□□ 0.69
CHMP7-210ENST00000523091 PRAM1Q96QH2 718 aa19.38■□□□□ 0.69
CHMP7-210ENST00000523091 ANKRD36BQ8N2N9 1353 aa19.37■□□□□ 0.69
CHMP7-210ENST00000523091 BCAR3O75815 825 aa19.36■□□□□ 0.69
CHMP7-210ENST00000523091 ANO8Q9HCE9 1232 aaPredicted RBP19.36■□□□□ 0.69
CHMP7-210ENST00000523091 SHPRHQ149N8 1683 aa19.35■□□□□ 0.69
CHMP7-210ENST00000523091 WWC1Q8IX03 1113 aa19.35■□□□□ 0.69
CHMP7-210ENST00000523091 POGKQ9P215 609 aa19.35■□□□□ 0.69
CHMP7-210ENST00000523091 E9PSI1 815 aa19.35■□□□□ 0.69
CHMP7-210ENST00000523091 PUS7Q96PZ0 661 aaKnown RBP19.35■□□□□ 0.69
CHMP7-210ENST00000523091 PTPRMP28827 1452 aa19.34■□□□□ 0.69
CHMP7-210ENST00000523091 A0A1W2PP64 1363 aa19.33■□□□□ 0.69
CHMP7-210ENST00000523091 YTHDC2Q9H6S0 1430 aaKnown RBP19.33■□□□□ 0.69
CHMP7-210ENST00000523091 NKTRP30414 1462 aaKnown RBP19.33■□□□□ 0.69
CHMP7-210ENST00000523091 TCP11L2Q8N4U5 519 aa19.32■□□□□ 0.68
CHMP7-210ENST00000523091 GGNBP2Q9H3C7 697 aa19.32■□□□□ 0.68
CHMP7-210ENST00000523091 USP32Q8NFA0 1604 aa19.32■□□□□ 0.68
CHMP7-210ENST00000523091 RUNDC1Q96C34 613 aa19.31■□□□□ 0.68
CHMP7-210ENST00000523091 TCERG1O14776 1098 aaKnown RBP19.31■□□□□ 0.68
CHMP7-210ENST00000523091 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.3■□□□□ 0.68
CHMP7-210ENST00000523091 CLTCQ00610 1675 aaKnown RBP19.3■□□□□ 0.68
CHMP7-210ENST00000523091 CFAP53Q96M91 514 aa19.29■□□□□ 0.68
CHMP7-210ENST00000523091 ALKQ9UM73 1620 aa19.29■□□□□ 0.68
CHMP7-210ENST00000523091 U2AF1L5P0DN76 240 aaPredicted RBP19.28■□□□□ 0.68
CHMP7-210ENST00000523091 U2AF1Q01081 240 aaKnown RBP eCLIP19.28■□□□□ 0.68
CHMP7-210ENST00000523091 WAPLQ7Z5K2 1190 aa19.28■□□□□ 0.68
CHMP7-210ENST00000523091 CDK19Q9BWU1 502 aa19.28■□□□□ 0.68
CHMP7-210ENST00000523091 PDE4AP27815 886 aa19.27■□□□□ 0.68
CHMP7-210ENST00000523091 NOP58Q9Y2X3 529 aaKnown RBP19.27■□□□□ 0.68
CHMP7-210ENST00000523091 NGEFQ8N5V2 710 aa19.27■□□□□ 0.67
CHMP7-210ENST00000523091 NSD2O96028 1365 aa19.26■□□□□ 0.67
CHMP7-210ENST00000523091 ABCC11Q96J66 1382 aa19.26■□□□□ 0.67
CHMP7-210ENST00000523091 PAK3O75914 559 aaPredicted RBP19.26■□□□□ 0.67
CHMP7-210ENST00000523091 FYB1O15117 783 aa19.26■□□□□ 0.67
CHMP7-210ENST00000523091 KDM2BQ8NHM5 1336 aa19.25■□□□□ 0.67
CHMP7-210ENST00000523091 CABP1Q9NZU7 370 aa19.25■□□□□ 0.67
CHMP7-210ENST00000523091 AGLP35573 1532 aa19.25■□□□□ 0.67
CHMP7-210ENST00000523091 NPM2Q86SE8 214 aaKnown RBP19.25■□□□□ 0.67
CHMP7-210ENST00000523091 A2ML1A8K2U0 1454 aa19.24■□□□□ 0.67
CHMP7-210ENST00000523091 IQSEC2Q5JU85 1478 aa19.24■□□□□ 0.67
CHMP7-210ENST00000523091 CD163L1Q9NR16 1453 aa19.24■□□□□ 0.67
CHMP7-210ENST00000523091 ANP32AP39687 249 aaKnown RBP19.24■□□□□ 0.67
CHMP7-210ENST00000523091 ATAD2Q6PL18 1390 aa19.24■□□□□ 0.67
CHMP7-210ENST00000523091 TERF2IPQ9NYB0 399 aa19.24■□□□□ 0.67
CHMP7-210ENST00000523091 NBR1Q14596 966 aa19.23■□□□□ 0.67
CHMP7-210ENST00000523091 BACH2Q9BYV9 841 aa19.23■□□□□ 0.67
CHMP7-210ENST00000523091 PPP6R1Q9UPN7 881 aa19.23■□□□□ 0.67
CHMP7-210ENST00000523091 REREQ9P2R6 1566 aa19.22■□□□□ 0.67
CHMP7-210ENST00000523091 PHF23Q9BUL5 403 aaPredicted RBP19.22■□□□□ 0.67
CHMP7-210ENST00000523091 NINLQ9Y2I6 1382 aa19.22■□□□□ 0.67
CHMP7-210ENST00000523091 RIMS2Q9UQ26 1411 aa19.22■□□□□ 0.67
CHMP7-210ENST00000523091 U2SURPO15042 1029 aaKnown RBP19.22■□□□□ 0.67
CHMP7-210ENST00000523091 MS4A1P11836 297 aa19.21■□□□□ 0.67
CHMP7-210ENST00000523091 FBLN1P23142 703 aa19.2■□□□□ 0.66
CHMP7-210ENST00000523091 ARHGEF40Q8TER5 1519 aa19.2■□□□□ 0.66
CHMP7-210ENST00000523091 IPO9Q96P70 1041 aaKnown RBP19.2■□□□□ 0.66
CHMP7-210ENST00000523091 SPATA31D1Q6ZQQ2 1576 aa19.2■□□□□ 0.66
CHMP7-210ENST00000523091 CENPQQ7L2Z9 268 aaPredicted RBP19.2■□□□□ 0.66
CHMP7-210ENST00000523091 PANK1Q8TE04 598 aa19.2■□□□□ 0.66
CHMP7-210ENST00000523091 FRAT1Q92837 279 aaPredicted RBP19.19■□□□□ 0.66
CHMP7-210ENST00000523091 HDGFL2Q7Z4V5 671 aaPredicted RBP19.18■□□□□ 0.66
CHMP7-210ENST00000523091 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.18■□□□□ 0.66
CHMP7-210ENST00000523091 BCL2L13Q9BXK5 485 aa19.18■□□□□ 0.66
CHMP7-210ENST00000523091 CANXP27824 592 aaKnown RBP19.18■□□□□ 0.66
CHMP7-210ENST00000523091 WDR63Q8IWG1 891 aa19.18■□□□□ 0.66
CHMP7-210ENST00000523091 NLRP1Q9C000 1473 aa19.18■□□□□ 0.66
CHMP7-210ENST00000523091 ESF1Q9H501 851 aaKnown RBP19.17■□□□□ 0.66
CHMP7-210ENST00000523091 COG6Q9Y2V7 657 aa19.17■□□□□ 0.66
CHMP7-210ENST00000523091 RARSP54136 660 aaKnown RBP19.17■□□□□ 0.66
CHMP7-210ENST00000523091 ZMYM3Q14202 1370 aa19.16■□□□□ 0.66
CHMP7-210ENST00000523091 TNNQ9UQP3 1299 aa19.16■□□□□ 0.66
CHMP7-210ENST00000523091 CCDC27Q2M243 656 aa19.16■□□□□ 0.66
CHMP7-210ENST00000523091 PLEKHF1Q96S99 279 aa19.15■□□□□ 0.66
CHMP7-210ENST00000523091 TXNDC2Q86VQ3 553 aa19.15■□□□□ 0.66
CHMP7-210ENST00000523091 METP08581 1390 aa19.15■□□□□ 0.66
CHMP7-210ENST00000523091 KIF13AQ9H1H9 1805 aa19.14■□□□□ 0.65
CHMP7-210ENST00000523091 COL3A1P02461 1466 aaPredicted RBP19.14■□□□□ 0.65
CHMP7-210ENST00000523091 IGHDP01880 384 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms