RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 LRP6O75581 1613 aa27.41■■□□□ 1.98
SPIDR-220ENST00000522900 DCAF11Q8TEB1 546 aa27.4■■□□□ 1.98
SPIDR-220ENST00000522900 LRRC59Q96AG4 307 aaKnown RBP27.39■■□□□ 1.98
SPIDR-220ENST00000522900 NHSL1Q5SYE7 1610 aa27.38■■□□□ 1.97
SPIDR-220ENST00000522900 NUTM2FA1L443 756 aa27.37■■□□□ 1.97
SPIDR-220ENST00000522900 NUTM2BA6NNL0 878 aaPredicted RBP27.37■■□□□ 1.97
SPIDR-220ENST00000522900 NUTM2EB1AL46 878 aaPredicted RBP27.37■■□□□ 1.97
SPIDR-220ENST00000522900 NUTM2AQ8IVF1 878 aaPredicted RBP27.37■■□□□ 1.97
SPIDR-220ENST00000522900 DHX57Q6P158 1386 aaKnown RBP27.36■■□□□ 1.97
SPIDR-220ENST00000522900 SIRT1Q96EB6 747 aa27.36■■□□□ 1.97
SPIDR-220ENST00000522900 ESCO1Q5FWF5 840 aa27.35■■□□□ 1.97
SPIDR-220ENST00000522900 SHPRHQ149N8 1683 aa27.34■■□□□ 1.97
SPIDR-220ENST00000522900 MEX3CQ5U5Q3 659 aaKnown RBP27.34■■□□□ 1.97
SPIDR-220ENST00000522900 CDC42BPGQ6DT37 1551 aa27.33■■□□□ 1.97
SPIDR-220ENST00000522900 SOS2Q07890 1332 aaPredicted RBP27.32■■□□□ 1.96
SPIDR-220ENST00000522900 KNDC1Q76NI1 1749 aa27.32■■□□□ 1.96
SPIDR-220ENST00000522900 PRAM1Q96QH2 718 aa27.31■■□□□ 1.96
SPIDR-220ENST00000522900 PNPLA6Q8IY17 1366 aa27.31■■□□□ 1.96
SPIDR-220ENST00000522900 SAFB2Q14151 953 aaKnown RBP eCLIP27.3■■□□□ 1.96
SPIDR-220ENST00000522900 LAMC1P11047 1609 aa27.28■■□□□ 1.96
SPIDR-220ENST00000522900 FOXO3O43524 673 aa27.27■■□□□ 1.96
SPIDR-220ENST00000522900 STAC3Q96MF2 364 aa27.27■■□□□ 1.96
SPIDR-220ENST00000522900 TRAK1Q9UPV9 953 aa27.27■■□□□ 1.96
SPIDR-220ENST00000522900 ADGRB1O14514 1584 aa27.26■■□□□ 1.96
SPIDR-220ENST00000522900 XPCQ01831 940 aaPredicted RBP27.25■■□□□ 1.95
SPIDR-220ENST00000522900 POGKQ9P215 609 aa27.24■■□□□ 1.95
SPIDR-220ENST00000522900 NPHP3Q7Z494 1330 aa27.23■■□□□ 1.95
SPIDR-220ENST00000522900 ZNF772Q68DY9 489 aaPredicted RBP27.2■■□□□ 1.94
SPIDR-220ENST00000522900 DLC1Q96QB1 1528 aa27.2■■□□□ 1.94
SPIDR-220ENST00000522900 PXDNQ92626 1479 aa27.19■■□□□ 1.94
SPIDR-220ENST00000522900 ADAMTS2O95450 1211 aa27.18■■□□□ 1.94
SPIDR-220ENST00000522900 C8orf37Q96NL8 207 aa27.18■■□□□ 1.94
SPIDR-220ENST00000522900 HIRIP3Q9BW71 556 aaPredicted RBP27.18■■□□□ 1.94
SPIDR-220ENST00000522900 FMN2Q9NZ56 1722 aa27.18■■□□□ 1.94
SPIDR-220ENST00000522900 AFF2P51816 1311 aa27.17■■□□□ 1.94
SPIDR-220ENST00000522900 MINK1Q8N4C8 1332 aaPredicted RBP27.15■■□□□ 1.94
SPIDR-220ENST00000522900 PHF8Q9UPP1 1060 aa27.14■■□□□ 1.94
SPIDR-220ENST00000522900 SIN3AQ96ST3 1273 aa27.13■■□□□ 1.93
SPIDR-220ENST00000522900 KRT28Q7Z3Y7 464 aa27.12■■□□□ 1.93
SPIDR-220ENST00000522900 NGLY1Q96IV0 654 aa27.11■■□□□ 1.93
SPIDR-220ENST00000522900 NBPF1Q3BBV0 1214 aa27.1■■□□□ 1.93
SPIDR-220ENST00000522900 RXRBP28702 533 aa27.08■■□□□ 1.93
SPIDR-220ENST00000522900 PMFBP1Q8TBY8 1022 aa27.08■■□□□ 1.93
SPIDR-220ENST00000522900 SPATA31A3Q5VYP0 1347 aa27.08■■□□□ 1.93
SPIDR-220ENST00000522900 WASLO00401 505 aaPredicted RBP27.07■■□□□ 1.92
SPIDR-220ENST00000522900 L3MBTL2Q969R5 705 aa27.07■■□□□ 1.92
SPIDR-220ENST00000522900 RGPD8O14715 1765 aaPredicted RBP27.07■■□□□ 1.92
SPIDR-220ENST00000522900 QTRT2Q9H974 415 aaKnown RBP27.06■■□□□ 1.92
SPIDR-220ENST00000522900 PRR36Q9H6K5 1346 aa27.06■■□□□ 1.92
SPIDR-220ENST00000522900 ADGRB2O60241 1585 aa27.05■■□□□ 1.92
SPIDR-220ENST00000522900 COL22A1Q8NFW1 1626 aaPredicted RBP27.05■■□□□ 1.92
SPIDR-220ENST00000522900 NEUROD1Q13562 356 aa27.05■■□□□ 1.92
SPIDR-220ENST00000522900 KIF1AQ12756 1690 aa27.05■■□□□ 1.92
SPIDR-220ENST00000522900 ANKARQ7Z5J8 1434 aa27.04■■□□□ 1.92
SPIDR-220ENST00000522900 USP32Q8NFA0 1604 aa27.04■■□□□ 1.92
SPIDR-220ENST00000522900 PSME1Q06323 249 aa27.03■■□□□ 1.92
SPIDR-220ENST00000522900 FNBP4Q8N3X1 1017 aaPredicted RBP27.01■■□□□ 1.91
SPIDR-220ENST00000522900 USP21Q9UK80 565 aa27■■□□□ 1.91
SPIDR-220ENST00000522900 ARHGEF28Q8N1W1 1705 aaKnown RBP26.99■■□□□ 1.91
SPIDR-220ENST00000522900 PLEKHG5O94827 1062 aa26.98■■□□□ 1.91
SPIDR-220ENST00000522900 TULP4Q9NRJ4 1543 aa26.97■■□□□ 1.91
SPIDR-220ENST00000522900 RBM6P78332 1123 aaKnown RBP26.97■■□□□ 1.91
SPIDR-220ENST00000522900 CABLES1Q8TDN4 633 aa26.97■■□□□ 1.91
SPIDR-220ENST00000522900 TNS3Q68CZ2 1445 aa26.97■■□□□ 1.91
SPIDR-220ENST00000522900 SBNO1A3KN83 1393 aa26.97■■□□□ 1.91
SPIDR-220ENST00000522900 KIAA1210Q9ULL0 1709 aa26.96■■□□□ 1.91
SPIDR-220ENST00000522900 LMOD2Q6P5Q4 547 aa26.96■■□□□ 1.91
SPIDR-220ENST00000522900 CDK19Q9BWU1 502 aa26.96■■□□□ 1.91
SPIDR-220ENST00000522900 EIF3AQ14152 1382 aaKnown RBP26.96■■□□□ 1.91
SPIDR-220ENST00000522900 NUDT16Q96DE0 195 aaKnown RBP26.95■■□□□ 1.9
SPIDR-220ENST00000522900 TRIM26Q12899 539 aaPredicted RBP26.93■■□□□ 1.9
SPIDR-220ENST00000522900 TRPC5Q9UL62 973 aaPredicted RBP26.92■■□□□ 1.9
SPIDR-220ENST00000522900 CDK12Q9NYV4 1490 aaPredicted RBP26.92■■□□□ 1.9
SPIDR-220ENST00000522900 BCL9LQ86UU0 1499 aa26.91■■□□□ 1.9
SPIDR-220ENST00000522900 NGDNQ8NEJ9 315 aaKnown RBP26.9■■□□□ 1.9
SPIDR-220ENST00000522900 GPRASP1Q5JY77 1395 aa26.89■■□□□ 1.9
SPIDR-220ENST00000522900 HAP1P54257 671 aaPredicted RBP26.89■■□□□ 1.9
SPIDR-220ENST00000522900 RGS12O14924 1447 aa26.89■■□□□ 1.89
SPIDR-220ENST00000522900 ATRNO75882 1429 aa26.89■■□□□ 1.89
SPIDR-220ENST00000522900 ATP7BP35670 1465 aa26.88■■□□□ 1.89
SPIDR-220ENST00000522900 CENPJQ9HC77 1338 aaPredicted RBP26.88■■□□□ 1.89
SPIDR-220ENST00000522900 ARHGEF10O15013 1369 aa26.87■■□□□ 1.89
SPIDR-220ENST00000522900 UPF1Q92900 1129 aaKnown RBP eCLIP26.86■■□□□ 1.89
SPIDR-220ENST00000522900 NBPF8Q3BBV2 869 aa26.85■■□□□ 1.89
SPIDR-220ENST00000522900 PAK3O75914 559 aaPredicted RBP26.84■■□□□ 1.89
SPIDR-220ENST00000522900 CCDC61Q9Y6R9 512 aa26.84■■□□□ 1.89
SPIDR-220ENST00000522900 MARF1Q9Y4F3 1742 aaKnown RBP26.84■■□□□ 1.89
SPIDR-220ENST00000522900 TRPM3Q9HCF6 1732 aaPredicted RBP26.83■■□□□ 1.89
SPIDR-220ENST00000522900 SLIT2O94813 1529 aa26.82■■□□□ 1.88
SPIDR-220ENST00000522900 UNC5CLQ8IV45 518 aa26.82■■□□□ 1.88
SPIDR-220ENST00000522900 FAM83GA6ND36 823 aa26.81■■□□□ 1.88
SPIDR-220ENST00000522900 GJD4Q96KN9 370 aaPredicted RBP26.81■■□□□ 1.88
SPIDR-220ENST00000522900 CABP2Q9NPB3 220 aa26.81■■□□□ 1.88
SPIDR-220ENST00000522900 ACEP12821 1306 aa26.81■■□□□ 1.88
SPIDR-220ENST00000522900 PLEKHG3A1L390 1219 aa26.8■■□□□ 1.88
SPIDR-220ENST00000522900 SRPK2P78362 688 aaKnown RBP26.8■■□□□ 1.88
SPIDR-220ENST00000522900 ROCK2O75116 1388 aaKnown RBP26.79■■□□□ 1.88
SPIDR-220ENST00000522900 TRPM1Q7Z4N2 1603 aa26.79■■□□□ 1.88
SPIDR-220ENST00000522900 ALS2Q96Q42 1657 aa26.77■■□□□ 1.88
SPIDR-220ENST00000522900 POLR3AO14802 1390 aaPredicted RBP26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms