RNA–Protein interactions for RNA: ENST00000522778.1

LINC01609-202, Transcript of long intergenic non-protein coding RNA 1609, humanhuman

TSL 2 BASIC

Gene LINC01609, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01609-202ENST00000522778 ZNF697Q5TEC3 545 aa12.1□□□□□ -0.47
LINC01609-202ENST00000522778 ZNF598Q86UK7 904 aaKnown RBP12.1□□□□□ -0.47
LINC01609-202ENST00000522778 AK7Q96M32 723 aa12.1□□□□□ -0.47
LINC01609-202ENST00000522778 USB1Q9BQ65 265 aaKnown RBP12.09□□□□□ -0.47
LINC01609-202ENST00000522778 TRIM66O15016 1216 aa12.08□□□□□ -0.48
LINC01609-202ENST00000522778 PARP9Q8IXQ6 854 aa12.07□□□□□ -0.48
LINC01609-202ENST00000522778 BCANQ96GW7 911 aa12.05□□□□□ -0.48
LINC01609-202ENST00000522778 BEGAINQ9BUH8 593 aa12.05□□□□□ -0.48
LINC01609-202ENST00000522778 TRIM67Q6ZTA4 783 aa12.04□□□□□ -0.48
LINC01609-202ENST00000522778 SPIRE2Q8WWL2 714 aa12.04□□□□□ -0.48
LINC01609-202ENST00000522778 SYMPKQ92797 1274 aaKnown RBP12.04□□□□□ -0.48
LINC01609-202ENST00000522778 SLC24A3Q9HC58 644 aa12.04□□□□□ -0.48
LINC01609-202ENST00000522778 FDX1P10109 184 aa12.03□□□□□ -0.48
LINC01609-202ENST00000522778 TNFRSF10AO00220 468 aa12.02□□□□□ -0.49
LINC01609-202ENST00000522778 ZBTB24O43167 697 aaPredicted RBP12.02□□□□□ -0.49
LINC01609-202ENST00000522778 RPIAP49247 311 aa12.02□□□□□ -0.49
LINC01609-202ENST00000522778 MMP16P51512 607 aa12.02□□□□□ -0.49
LINC01609-202ENST00000522778 C6orf229H3BNL8 230 aa12.01□□□□□ -0.49
LINC01609-202ENST00000522778 MOXD2PA6NHM9 499 aa12□□□□□ -0.49
LINC01609-202ENST00000522778 DXOO77932 396 aaKnown RBP12□□□□□ -0.49
LINC01609-202ENST00000522778 CD2BP2O95400 341 aaKnown RBP12□□□□□ -0.49
LINC01609-202ENST00000522778 MS4A1P11836 297 aa12□□□□□ -0.49
LINC01609-202ENST00000522778 NDUFV2P19404 249 aa12□□□□□ -0.49
LINC01609-202ENST00000522778 FOXC1Q12948 553 aa12□□□□□ -0.49
LINC01609-202ENST00000522778 PRR20EP86478 221 aa11.99□□□□□ -0.49
LINC01609-202ENST00000522778 PRR20CP86479 221 aa11.99□□□□□ -0.49
LINC01609-202ENST00000522778 PRR20DP86480 221 aa11.99□□□□□ -0.49
LINC01609-202ENST00000522778 PRR20BP86481 221 aa11.99□□□□□ -0.49
LINC01609-202ENST00000522778 PRR20AP86496 221 aa11.99□□□□□ -0.49
LINC01609-202ENST00000522778 PDE4DQ08499 809 aa11.99□□□□□ -0.49
LINC01609-202ENST00000522778 TRAF7Q6Q0C0 670 aa11.99□□□□□ -0.49
LINC01609-202ENST00000522778 CCDC24Q8N4L8 307 aa11.99□□□□□ -0.49
LINC01609-202ENST00000522778 PCDHGC3Q9UN70 934 aa11.99□□□□□ -0.49
LINC01609-202ENST00000522778 CECR2Q9BXF3 1484 aa11.98□□□□□ -0.49
LINC01609-202ENST00000522778 RETREG3Q86VR2 466 aa11.98□□□□□ -0.49
LINC01609-202ENST00000522778 GDF9O60383 454 aa11.97□□□□□ -0.49
LINC01609-202ENST00000522778 JUNDP17535 347 aa11.97□□□□□ -0.49
LINC01609-202ENST00000522778 TBC1D2Q9BYX2 928 aa11.97□□□□□ -0.49
LINC01609-202ENST00000522778 LCE2BO14633 110 aa11.96□□□□□ -0.49
LINC01609-202ENST00000522778 PKDCCQ504Y2 493 aa11.96□□□□□ -0.49
LINC01609-202ENST00000522778 DIXDC1Q155Q3 683 aa11.95□□□□□ -0.5
LINC01609-202ENST00000522778 FAM187AA6NFU0 413 aa11.94□□□□□ -0.5
LINC01609-202ENST00000522778 PKD2L1Q9P0L9 805 aa11.94□□□□□ -0.5
LINC01609-202ENST00000522778 TRIM32Q13049 653 aa11.93□□□□□ -0.5
LINC01609-202ENST00000522778 MTMR2Q13614 643 aa11.92□□□□□ -0.5
LINC01609-202ENST00000522778 RSBN1LQ6PCB5 846 aaPredicted RBP11.91□□□□□ -0.5
LINC01609-202ENST00000522778 NUDT12Q9BQG2 462 aa11.91□□□□□ -0.5
LINC01609-202ENST00000522778 UNC13AQ9UPW8 1703 aa11.89□□□□□ -0.51
LINC01609-202ENST00000522778 DGAT1O75907 488 aa11.89□□□□□ -0.51
LINC01609-202ENST00000522778 CYP4X1Q8N118 509 aa11.88□□□□□ -0.51
LINC01609-202ENST00000522778 PRR7Q8TB68 274 aa11.88□□□□□ -0.51
LINC01609-202ENST00000522778 SPDYE5A6NIY4 337 aa11.87□□□□□ -0.51
LINC01609-202ENST00000522778 GJA5P36382 358 aa11.87□□□□□ -0.51
LINC01609-202ENST00000522778 CSPP1Q1MSJ5 1256 aa11.87□□□□□ -0.51
LINC01609-202ENST00000522778 CC2D2AQ9P2K1 1620 aa11.86□□□□□ -0.51
LINC01609-202ENST00000522778 RIC3Q7Z5B4 369 aa11.86□□□□□ -0.51
LINC01609-202ENST00000522778 SPTLC1O15269 473 aa11.85□□□□□ -0.51
LINC01609-202ENST00000522778 CCNYL3P0C7X3 344 aa11.85□□□□□ -0.51
LINC01609-202ENST00000522778 PCDHB15Q9Y5E8 787 aa11.85□□□□□ -0.51
LINC01609-202ENST00000522778 TTC24A2A3L6 582 aaPredicted RBP11.84□□□□□ -0.51
LINC01609-202ENST00000522778 WNT7AO00755 349 aa11.84□□□□□ -0.51
LINC01609-202ENST00000522778 ZBTB3Q9H5J0 574 aa11.84□□□□□ -0.51
LINC01609-202ENST00000522778 MYT1Q01538 1121 aa11.83□□□□□ -0.52
LINC01609-202ENST00000522778 PTPRNQ16849 979 aa11.83□□□□□ -0.52
LINC01609-202ENST00000522778 MYSM1Q5VVJ2 828 aa11.83□□□□□ -0.52
LINC01609-202ENST00000522778 TOR4AQ9NXH8 423 aa11.83□□□□□ -0.52
LINC01609-202ENST00000522778 HRCP23327 699 aa11.82□□□□□ -0.52
LINC01609-202ENST00000522778 PTCRAQ6ISU1 281 aaPredicted RBP11.82□□□□□ -0.52
LINC01609-202ENST00000522778 MRGPRX2Q96LB1 330 aa11.82□□□□□ -0.52
LINC01609-202ENST00000522778 NACADO15069 1562 aa11.82□□□□□ -0.52
LINC01609-202ENST00000522778 BICRAQ9NZM4 1560 aa11.82□□□□□ -0.52
LINC01609-202ENST00000522778 CABLES1Q8TDN4 633 aa11.81□□□□□ -0.52
LINC01609-202ENST00000522778 WNT7BP56706 349 aa11.8□□□□□ -0.52
LINC01609-202ENST00000522778 SKOR1P84550 965 aa11.8□□□□□ -0.52
LINC01609-202ENST00000522778 DESI1Q6ICB0 168 aa11.8□□□□□ -0.52
LINC01609-202ENST00000522778 LIMD1Q9UGP4 676 aa11.8□□□□□ -0.52
LINC01609-202ENST00000522778 CFAP99D6REC4 459 aa11.79□□□□□ -0.52
LINC01609-202ENST00000522778 RC3H1Q5TC82 1133 aaKnown RBP11.79□□□□□ -0.52
LINC01609-202ENST00000522778 PRPF38BQ5VTL8 546 aaKnown RBP11.79□□□□□ -0.52
LINC01609-202ENST00000522778 GPBP1L1Q9HC44 474 aaPredicted RBP11.79□□□□□ -0.52
LINC01609-202ENST00000522778 NUTM2BA6NNL0 878 aaPredicted RBP11.78□□□□□ -0.52
LINC01609-202ENST00000522778 NUTM2EB1AL46 878 aaPredicted RBP11.78□□□□□ -0.52
LINC01609-202ENST00000522778 NUTM2DQ5VT03 806 aaPredicted RBP11.78□□□□□ -0.52
LINC01609-202ENST00000522778 NUTM2AQ8IVF1 878 aaPredicted RBP11.78□□□□□ -0.52
LINC01609-202ENST00000522778 SNIP1Q8TAD8 396 aaKnown RBP11.78□□□□□ -0.52
LINC01609-202ENST00000522778 TSC1Q92574 1164 aa11.78□□□□□ -0.52
LINC01609-202ENST00000522778 UNC93B1Q9H1C4 597 aa11.78□□□□□ -0.52
LINC01609-202ENST00000522778 EVA1BQ9NVM1 165 aa11.78□□□□□ -0.52
LINC01609-202ENST00000522778 ST8SIA5O15466 376 aa11.77□□□□□ -0.53
LINC01609-202ENST00000522778 ZNF787Q6DD87 383 aa11.77□□□□□ -0.53
LINC01609-202ENST00000522778 CTHP32929 405 aa11.76□□□□□ -0.53
LINC01609-202ENST00000522778 CLK2P49760 499 aaKnown RBP11.76□□□□□ -0.53
LINC01609-202ENST00000522778 KCNH2Q12809 1159 aa11.76□□□□□ -0.53
LINC01609-202ENST00000522778 QPCTQ16769 361 aa11.76□□□□□ -0.53
LINC01609-202ENST00000522778 RSPH6AQ9H0K4 717 aa11.76□□□□□ -0.53
LINC01609-202ENST00000522778 KDM4CQ9H3R0 1056 aa11.75□□□□□ -0.53
LINC01609-202ENST00000522778 POLR3EQ9NVU0 708 aa11.75□□□□□ -0.53
LINC01609-202ENST00000522778 EHBP1Q8NDI1 1231 aa11.74□□□□□ -0.53
LINC01609-202ENST00000522778 AAASQ9NRG9 546 aa11.74□□□□□ -0.53
LINC01609-202ENST00000522778 LINC01559Q495D7 138 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms