RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 C14orf93Q9H972 538 aaKnown RBP9.84□□□□□ -0.83
SPIDR-218ENST00000522222 ABCC11Q96J66 1382 aa9.84□□□□□ -0.83
SPIDR-218ENST00000522222 ATF3P18847 181 aa9.83□□□□□ -0.84
SPIDR-218ENST00000522222 CADPS2Q86UW7 1296 aa9.83□□□□□ -0.84
SPIDR-218ENST00000522222 DCAF11Q8TEB1 546 aa9.83□□□□□ -0.84
SPIDR-218ENST00000522222 STK26Q9P289 416 aa9.83□□□□□ -0.84
SPIDR-218ENST00000522222 KDM2AQ9Y2K7 1162 aa9.83□□□□□ -0.84
SPIDR-218ENST00000522222 PLEKHH1Q9ULM0 1364 aa9.83□□□□□ -0.84
SPIDR-218ENST00000522222 DLC1Q96QB1 1528 aa9.82□□□□□ -0.84
SPIDR-218ENST00000522222 COL16A1Q07092 1604 aaPredicted RBP9.82□□□□□ -0.84
SPIDR-218ENST00000522222 AHDC1Q5TGY3 1603 aaPredicted RBP9.82□□□□□ -0.84
SPIDR-218ENST00000522222 PHLPP1O60346 1717 aa9.82□□□□□ -0.84
SPIDR-218ENST00000522222 SLAIN2Q9P270 581 aa9.82□□□□□ -0.84
SPIDR-218ENST00000522222 MED1Q15648 1581 aaPredicted RBP9.82□□□□□ -0.84
SPIDR-218ENST00000522222 KIAA1210Q9ULL0 1709 aa9.81□□□□□ -0.84
SPIDR-218ENST00000522222 C1orf167Q5SNV9 1468 aa9.8□□□□□ -0.84
SPIDR-218ENST00000522222 ARHGEF28Q8N1W1 1705 aaKnown RBP9.8□□□□□ -0.84
SPIDR-218ENST00000522222 SIN3AQ96ST3 1273 aa9.8□□□□□ -0.84
SPIDR-218ENST00000522222 NHSL1Q5SYE7 1610 aa9.8□□□□□ -0.84
SPIDR-218ENST00000522222 ADGRB2O60241 1585 aa9.8□□□□□ -0.84
SPIDR-218ENST00000522222 FMN2Q9NZ56 1722 aa9.79□□□□□ -0.84
SPIDR-218ENST00000522222 BRINP3Q76B58 766 aa9.79□□□□□ -0.84
SPIDR-218ENST00000522222 WAPLQ7Z5K2 1190 aa9.79□□□□□ -0.84
SPIDR-218ENST00000522222 STAC3Q96MF2 364 aa9.79□□□□□ -0.84
SPIDR-218ENST00000522222 NEUROD1Q13562 356 aa9.77□□□□□ -0.85
SPIDR-218ENST00000522222 PELP1Q8IZL8 1130 aaKnown RBP9.77□□□□□ -0.85
SPIDR-218ENST00000522222 L3MBTL2Q969R5 705 aa9.77□□□□□ -0.85
SPIDR-218ENST00000522222 PRAM1Q96QH2 718 aa9.77□□□□□ -0.85
SPIDR-218ENST00000522222 TRPM1Q7Z4N2 1603 aa9.77□□□□□ -0.85
SPIDR-218ENST00000522222 DISP3Q9P2K9 1392 aa9.76□□□□□ -0.85
SPIDR-218ENST00000522222 SAFB2Q14151 953 aaKnown RBP eCLIP9.76□□□□□ -0.85
SPIDR-218ENST00000522222 SIRT1Q96EB6 747 aa9.76□□□□□ -0.85
SPIDR-218ENST00000522222 SHPRHQ149N8 1683 aa9.75□□□□□ -0.85
SPIDR-218ENST00000522222 TRAK1Q9UPV9 953 aa9.75□□□□□ -0.85
SPIDR-218ENST00000522222 JCADQ9P266 1359 aa9.75□□□□□ -0.85
SPIDR-218ENST00000522222 KIF1AQ12756 1690 aa9.74□□□□□ -0.85
SPIDR-218ENST00000522222 CLSPNQ9HAW4 1339 aa9.74□□□□□ -0.85
SPIDR-218ENST00000522222 USP32Q8NFA0 1604 aa9.74□□□□□ -0.85
SPIDR-218ENST00000522222 NBPF1Q3BBV0 1214 aa9.73□□□□□ -0.85
SPIDR-218ENST00000522222 DDX17Q92841 729 aaKnown RBP9.73□□□□□ -0.85
SPIDR-218ENST00000522222 ORAI2Q96SN7 254 aa9.73□□□□□ -0.85
SPIDR-218ENST00000522222 POGKQ9P215 609 aa9.73□□□□□ -0.85
SPIDR-218ENST00000522222 TONSLQ96HA7 1378 aa9.73□□□□□ -0.85
SPIDR-218ENST00000522222 PXDNQ92626 1479 aa9.72□□□□□ -0.85
SPIDR-218ENST00000522222 TULP4Q9NRJ4 1543 aa9.72□□□□□ -0.85
SPIDR-218ENST00000522222 LRP6O75581 1613 aa9.72□□□□□ -0.85
SPIDR-218ENST00000522222 NUTM2FA1L443 756 aa9.72□□□□□ -0.85
SPIDR-218ENST00000522222 MINK1Q8N4C8 1332 aaPredicted RBP9.72□□□□□ -0.85
SPIDR-218ENST00000522222 ANKARQ7Z5J8 1434 aa9.72□□□□□ -0.85
SPIDR-218ENST00000522222 RALGAPBQ86X10 1494 aa9.72□□□□□ -0.85
SPIDR-218ENST00000522222 QRICH2Q9H0J4 1663 aa9.71□□□□□ -0.85
SPIDR-218ENST00000522222 RGPD8O14715 1765 aaPredicted RBP9.71□□□□□ -0.85
SPIDR-218ENST00000522222 HIRIP3Q9BW71 556 aaPredicted RBP9.71□□□□□ -0.86
SPIDR-218ENST00000522222 ROCK2O75116 1388 aaKnown RBP9.71□□□□□ -0.86
SPIDR-218ENST00000522222 CENPBP07199 599 aaPredicted RBP9.7□□□□□ -0.86
SPIDR-218ENST00000522222 HOXD11P31277 338 aaPredicted RBP9.7□□□□□ -0.86
SPIDR-218ENST00000522222 ESCO1Q5FWF5 840 aa9.7□□□□□ -0.86
SPIDR-218ENST00000522222 EIF3AQ14152 1382 aaKnown RBP9.7□□□□□ -0.86
SPIDR-218ENST00000522222 GPRASP1Q5JY77 1395 aa9.7□□□□□ -0.86
SPIDR-218ENST00000522222 PNPLA6Q8IY17 1366 aa9.7□□□□□ -0.86
SPIDR-218ENST00000522222 ATP7BP35670 1465 aa9.7□□□□□ -0.86
SPIDR-218ENST00000522222 SOS2Q07890 1332 aaPredicted RBP9.69□□□□□ -0.86
SPIDR-218ENST00000522222 NBPF8Q3BBV2 869 aa9.69□□□□□ -0.86
SPIDR-218ENST00000522222 NPHP3Q7Z494 1330 aa9.69□□□□□ -0.86
SPIDR-218ENST00000522222 TOPAZ1Q8N9V7 1692 aa9.69□□□□□ -0.86
SPIDR-218ENST00000522222 PRR36Q9H6K5 1346 aa9.69□□□□□ -0.86
SPIDR-218ENST00000522222 ITSN1Q15811 1721 aa9.68□□□□□ -0.86
SPIDR-218ENST00000522222 COL22A1Q8NFW1 1626 aaPredicted RBP9.68□□□□□ -0.86
SPIDR-218ENST00000522222 SPATA31A6Q5VVP1 1343 aa9.68□□□□□ -0.86
SPIDR-218ENST00000522222 CENPJQ9HC77 1338 aaPredicted RBP9.68□□□□□ -0.86
SPIDR-218ENST00000522222 XPCQ01831 940 aaPredicted RBP9.68□□□□□ -0.86
SPIDR-218ENST00000522222 WASLO00401 505 aaPredicted RBP9.67□□□□□ -0.86
SPIDR-218ENST00000522222 FOXO3O43524 673 aa9.67□□□□□ -0.86
SPIDR-218ENST00000522222 DIEXFQ68CQ4 756 aaKnown RBP9.67□□□□□ -0.86
SPIDR-218ENST00000522222 TRPM3Q9HCF6 1732 aaPredicted RBP9.66□□□□□ -0.86
SPIDR-218ENST00000522222 LRRC59Q96AG4 307 aaKnown RBP9.66□□□□□ -0.86
SPIDR-218ENST00000522222 PHF8Q9UPP1 1060 aa9.66□□□□□ -0.86
SPIDR-218ENST00000522222 TNS3Q68CZ2 1445 aa9.65□□□□□ -0.86
SPIDR-218ENST00000522222 ZNF316A6NFI3 1004 aaPredicted RBP9.65□□□□□ -0.86
SPIDR-218ENST00000522222 ILDR2Q71H61 639 aa9.65□□□□□ -0.86
SPIDR-218ENST00000522222 NUTM2BA6NNL0 878 aaPredicted RBP9.64□□□□□ -0.87
SPIDR-218ENST00000522222 NUTM2EB1AL46 878 aaPredicted RBP9.64□□□□□ -0.87
SPIDR-218ENST00000522222 NUTM2AQ8IVF1 878 aaPredicted RBP9.64□□□□□ -0.87
SPIDR-218ENST00000522222 RNF216Q9NWF9 866 aaPredicted RBP9.64□□□□□ -0.87
SPIDR-218ENST00000522222 ABCA3Q99758 1704 aa9.64□□□□□ -0.87
SPIDR-218ENST00000522222 SPATA31A3Q5VYP0 1347 aa9.63□□□□□ -0.87
SPIDR-218ENST00000522222 MEX3CQ5U5Q3 659 aaKnown RBP9.63□□□□□ -0.87
SPIDR-218ENST00000522222 PMFBP1Q8TBY8 1022 aa9.63□□□□□ -0.87
SPIDR-218ENST00000522222 NUDT16Q96DE0 195 aaKnown RBP9.63□□□□□ -0.87
SPIDR-218ENST00000522222 CDK19Q9BWU1 502 aa9.63□□□□□ -0.87
SPIDR-218ENST00000522222 RGS17Q9UGC6 210 aaPredicted RBP9.63□□□□□ -0.87
SPIDR-218ENST00000522222 ALS2Q96Q42 1657 aa9.63□□□□□ -0.87
SPIDR-218ENST00000522222 SBNO1A3KN83 1393 aa9.63□□□□□ -0.87
SPIDR-218ENST00000522222 KRT28Q7Z3Y7 464 aa9.62□□□□□ -0.87
SPIDR-218ENST00000522222 CARD11Q9BXL7 1154 aa9.62□□□□□ -0.87
SPIDR-218ENST00000522222 SBNO2Q9Y2G9 1366 aa9.62□□□□□ -0.87
SPIDR-218ENST00000522222 SRPK2P78362 688 aaKnown RBP9.61□□□□□ -0.87
SPIDR-218ENST00000522222 PPIP5K1Q6PFW1 1433 aa9.61□□□□□ -0.87
SPIDR-218ENST00000522222 POLR3AO14802 1390 aaPredicted RBP9.61□□□□□ -0.87
SPIDR-218ENST00000522222 ARHGEF10O15013 1369 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms