RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.97■■■■□ 3.03
PVT1-212ENST00000521951 TESK2Q96S53 571 aa33.94■■■■□ 3.02
PVT1-212ENST00000521951 MINK1Q8N4C8 1332 aaPredicted RBP33.94■■■■□ 3.02
PVT1-212ENST00000521951 XIRP1Q702N8 1843 aaKnown RBP33.94■■■■□ 3.02
PVT1-212ENST00000521951 NCOA3Q9Y6Q9 1424 aa33.92■■■■□ 3.02
PVT1-212ENST00000521951 SBNO2Q9Y2G9 1366 aa33.91■■■■□ 3.02
PVT1-212ENST00000521951 NALCNQ8IZF0 1738 aa33.9■■■■□ 3.02
PVT1-212ENST00000521951 C14orf37Q86TY3 774 aa33.89■■■■□ 3.02
PVT1-212ENST00000521951 ADGRL3Q9HAR2 1447 aa33.88■■■■□ 3.01
PVT1-212ENST00000521951 ADGRB2O60241 1585 aa33.84■■■■□ 3.01
PVT1-212ENST00000521951 C19orf44Q9H6X5 657 aa33.84■■■■□ 3.01
PVT1-212ENST00000521951 SLC24A1O60721 1099 aa33.83■■■■□ 3.01
PVT1-212ENST00000521951 EVC2Q86UK5 1308 aa33.81■■■■□ 3
PVT1-212ENST00000521951 TULP4Q9NRJ4 1543 aa33.8■■■■□ 3
PVT1-212ENST00000521951 WASLO00401 505 aaPredicted RBP33.8■■■■□ 3
PVT1-212ENST00000521951 TMF1P82094 1093 aa33.8■■■■□ 3
PVT1-212ENST00000521951 MSH6P52701 1360 aa33.79■■■■□ 3
PVT1-212ENST00000521951 CDK19Q9BWU1 502 aa33.79■■■■□ 3
PVT1-212ENST00000521951 DISP3Q9P2K9 1392 aa33.78■■■■□ 3
PVT1-212ENST00000521951 CDC42BPGQ6DT37 1551 aa33.77■■■■□ 3
PVT1-212ENST00000521951 C11orf95C9JLR9 678 aaPredicted RBP33.74■■■□□ 2.99
PVT1-212ENST00000521951 DCCP43146 1447 aa33.73■■■□□ 2.99
PVT1-212ENST00000521951 CABP2Q9NPB3 220 aa33.73■■■□□ 2.99
PVT1-212ENST00000521951 FMN2Q9NZ56 1722 aa33.72■■■□□ 2.99
PVT1-212ENST00000521951 ATF3P18847 181 aa33.72■■■□□ 2.99
PVT1-212ENST00000521951 SRPK2P78362 688 aaKnown RBP33.72■■■□□ 2.99
PVT1-212ENST00000521951 CERKQ8TCT0 537 aa33.7■■■□□ 2.99
PVT1-212ENST00000521951 CADPS2Q86UW7 1296 aa33.69■■■□□ 2.98
PVT1-212ENST00000521951 NUTM2FA1L443 756 aa33.69■■■□□ 2.98
PVT1-212ENST00000521951 CDCA8Q53HL2 280 aa33.68■■■□□ 2.98
PVT1-212ENST00000521951 PUS7Q96PZ0 661 aaKnown RBP33.67■■■□□ 2.98
PVT1-212ENST00000521951 IQSEC2Q5JU85 1478 aa33.66■■■□□ 2.98
PVT1-212ENST00000521951 PRR36Q9H6K5 1346 aa33.65■■■□□ 2.98
PVT1-212ENST00000521951 NUDT16Q96DE0 195 aaKnown RBP33.65■■■□□ 2.98
PVT1-212ENST00000521951 USP32Q8NFA0 1604 aa33.64■■■□□ 2.98
PVT1-212ENST00000521951 KIF7Q2M1P5 1343 aa33.64■■■□□ 2.98
PVT1-212ENST00000521951 ZNF316A6NFI3 1004 aaPredicted RBP33.63■■■□□ 2.97
PVT1-212ENST00000521951 RGPD8O14715 1765 aaPredicted RBP33.63■■■□□ 2.97
PVT1-212ENST00000521951 MST1RQ04912 1400 aa33.63■■■□□ 2.97
PVT1-212ENST00000521951 ATP7BP35670 1465 aa33.62■■■□□ 2.97
PVT1-212ENST00000521951 POLR3GLQ9BT43 218 aa33.62■■■□□ 2.97
PVT1-212ENST00000521951 ANKARQ7Z5J8 1434 aa33.62■■■□□ 2.97
PVT1-212ENST00000521951 WASHC2AQ641Q2 1341 aa33.61■■■□□ 2.97
PVT1-212ENST00000521951 CCDC7Q96M83 1385 aa33.61■■■□□ 2.97
PVT1-212ENST00000521951 ATAD2Q6PL18 1390 aa33.6■■■□□ 2.97
PVT1-212ENST00000521951 C1orf167Q5SNV9 1468 aa33.58■■■□□ 2.97
PVT1-212ENST00000521951 SLAIN2Q9P270 581 aa33.58■■■□□ 2.97
PVT1-212ENST00000521951 CCDC61Q9Y6R9 512 aa33.58■■■□□ 2.97
PVT1-212ENST00000521951 TOPAZ1Q8N9V7 1692 aa33.54■■■□□ 2.96
PVT1-212ENST00000521951 ITSN1Q15811 1721 aa33.54■■■□□ 2.96
PVT1-212ENST00000521951 ORAI2Q96SN7 254 aa33.53■■■□□ 2.96
PVT1-212ENST00000521951 CABP1Q9NZU7 370 aa33.53■■■□□ 2.96
PVT1-212ENST00000521951 PPIP5K1Q6PFW1 1433 aa33.52■■■□□ 2.96
PVT1-212ENST00000521951 TOM1O60784 492 aa33.52■■■□□ 2.96
PVT1-212ENST00000521951 ESCO1Q5FWF5 840 aa33.52■■■□□ 2.96
PVT1-212ENST00000521951 TMC1Q8TDI8 760 aa33.52■■■□□ 2.96
PVT1-212ENST00000521951 SLC12A5Q9H2X9 1139 aa33.5■■■□□ 2.95
PVT1-212ENST00000521951 MYOM1P52179 1685 aa33.49■■■□□ 2.95
PVT1-212ENST00000521951 PLEKHG3A1L390 1219 aa33.48■■■□□ 2.95
PVT1-212ENST00000521951 UBAP1LF5GYI3 381 aa33.48■■■□□ 2.95
PVT1-212ENST00000521951 PHF8Q9UPP1 1060 aa33.48■■■□□ 2.95
PVT1-212ENST00000521951 PMFBP1Q8TBY8 1022 aa33.47■■■□□ 2.95
PVT1-212ENST00000521951 NINLQ9Y2I6 1382 aa33.46■■■□□ 2.95
PVT1-212ENST00000521951 BRINP3Q76B58 766 aa33.44■■■□□ 2.94
PVT1-212ENST00000521951 ACEP12821 1306 aa33.41■■■□□ 2.94
PVT1-212ENST00000521951 KIF1AQ12756 1690 aa33.41■■■□□ 2.94
PVT1-212ENST00000521951 NGDNQ8NEJ9 315 aaKnown RBP33.4■■■□□ 2.94
PVT1-212ENST00000521951 POLR3AO14802 1390 aaPredicted RBP33.39■■■□□ 2.94
PVT1-212ENST00000521951 CD163L1Q9NR16 1453 aa33.39■■■□□ 2.94
PVT1-212ENST00000521951 PIP4K2BP78356 416 aa33.38■■■□□ 2.93
PVT1-212ENST00000521951 TERF2IPQ9NYB0 399 aa33.38■■■□□ 2.93
PVT1-212ENST00000521951 ROBO1Q9Y6N7 1651 aa33.37■■■□□ 2.93
PVT1-212ENST00000521951 CPSF1Q10570 1443 aaKnown RBP33.36■■■□□ 2.93
PVT1-212ENST00000521951 FOXO3O43524 673 aa33.36■■■□□ 2.93
PVT1-212ENST00000521951 AKAP12Q02952 1782 aa33.35■■■□□ 2.93
PVT1-212ENST00000521951 ANKRD36BQ8N2N9 1353 aa33.35■■■□□ 2.93
PVT1-212ENST00000521951 HDGFL2Q7Z4V5 671 aaPredicted RBP33.35■■■□□ 2.93
PVT1-212ENST00000521951 PANK3Q9H999 370 aa33.35■■■□□ 2.93
PVT1-212ENST00000521951 A0A1W2PP64 1363 aa33.34■■■□□ 2.93
PVT1-212ENST00000521951 DDX10Q13206 875 aaKnown RBP33.34■■■□□ 2.93
PVT1-212ENST00000521951 ZNF692Q9BU19 519 aaPredicted RBP33.33■■■□□ 2.93
PVT1-212ENST00000521951 SCAF1Q9H7N4 1312 aaKnown RBP33.33■■■□□ 2.93
PVT1-212ENST00000521951 DDX17Q92841 729 aaKnown RBP33.33■■■□□ 2.93
PVT1-212ENST00000521951 KTN1Q86UP2 1357 aaKnown RBP33.31■■■□□ 2.92
PVT1-212ENST00000521951 PSME1Q06323 249 aa33.3■■■□□ 2.92
PVT1-212ENST00000521951 CARD14Q9BXL6 1004 aa33.29■■■□□ 2.92
PVT1-212ENST00000521951 NPHP3Q7Z494 1330 aa33.29■■■□□ 2.92
PVT1-212ENST00000521951 MON2Q7Z3U7 1717 aa33.28■■■□□ 2.92
PVT1-212ENST00000521951 USP6P35125 1406 aa33.27■■■□□ 2.92
PVT1-212ENST00000521951 NHSL1Q5SYE7 1610 aa33.27■■■□□ 2.92
PVT1-212ENST00000521951 XPCQ01831 940 aaPredicted RBP33.27■■■□□ 2.92
PVT1-212ENST00000521951 KRT28Q7Z3Y7 464 aa33.27■■■□□ 2.92
PVT1-212ENST00000521951 PXDNQ92626 1479 aa33.22■■■□□ 2.91
PVT1-212ENST00000521951 AHDC1Q5TGY3 1603 aaPredicted RBP33.22■■■□□ 2.91
PVT1-212ENST00000521951 EDC4Q6P2E9 1401 aaKnown RBP33.21■■■□□ 2.91
PVT1-212ENST00000521951 SSH2Q76I76 1423 aa33.21■■■□□ 2.91
PVT1-212ENST00000521951 NSD3Q9BZ95 1437 aa33.21■■■□□ 2.91
PVT1-212ENST00000521951 PER1O15534 1290 aaPredicted RBP33.21■■■□□ 2.91
PVT1-212ENST00000521951 SOS2Q07890 1332 aaPredicted RBP33.2■■■□□ 2.91
PVT1-212ENST00000521951 NRKQ7Z2Y5 1582 aa33.2■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms