RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 Q3C1V9 767 aa9.66□□□□□ -0.86
HDAC2-208ENST00000520746 LCE2AQ5TA79 106 aaPredicted RBP9.66□□□□□ -0.86
HDAC2-208ENST00000520746 CTC1Q2NKJ3 1217 aa9.65□□□□□ -0.86
HDAC2-208ENST00000520746 TREML4Q6UXN2 200 aa9.65□□□□□ -0.86
HDAC2-208ENST00000520746 KDM2AQ9Y2K7 1162 aa9.65□□□□□ -0.86
HDAC2-208ENST00000520746 TTC24A2A3L6 582 aaPredicted RBP9.64□□□□□ -0.87
HDAC2-208ENST00000520746 WNT7AO00755 349 aa9.64□□□□□ -0.87
HDAC2-208ENST00000520746 SMCPP49901 116 aaPredicted RBP9.64□□□□□ -0.87
HDAC2-208ENST00000520746 HAP1P54257 671 aaPredicted RBP9.64□□□□□ -0.87
HDAC2-208ENST00000520746 TRIM32Q13049 653 aa9.64□□□□□ -0.87
HDAC2-208ENST00000520746 GMPR2Q9P2T1 348 aaKnown RBP9.64□□□□□ -0.87
HDAC2-208ENST00000520746 KDM4AO75164 1064 aa9.63□□□□□ -0.87
HDAC2-208ENST00000520746 HLA-CQ95604 372 aa9.63□□□□□ -0.87
HDAC2-208ENST00000520746 DXOO77932 396 aaKnown RBP9.62□□□□□ -0.87
HDAC2-208ENST00000520746 SMPD1P17405 629 aa9.62□□□□□ -0.87
HDAC2-208ENST00000520746 MDM2Q00987 491 aaPredicted RBP9.62□□□□□ -0.87
HDAC2-208ENST00000520746 USB1Q9BQ65 265 aaKnown RBP9.62□□□□□ -0.87
HDAC2-208ENST00000520746 IRF6O14896 467 aa9.61□□□□□ -0.87
HDAC2-208ENST00000520746 C11orf95C9JLR9 678 aaPredicted RBP9.6□□□□□ -0.87
HDAC2-208ENST00000520746 SNIP1Q8TAD8 396 aaKnown RBP9.6□□□□□ -0.87
HDAC2-208ENST00000520746 MRGPRX2Q96LB1 330 aa9.6□□□□□ -0.87
HDAC2-208ENST00000520746 USP46P62068 366 aa9.59□□□□□ -0.87
HDAC2-208ENST00000520746 J3QL48 77 aa9.58□□□□□ -0.88
HDAC2-208ENST00000520746 HOXA2O43364 376 aa9.58□□□□□ -0.88
HDAC2-208ENST00000520746 MINK1Q8N4C8 1332 aaPredicted RBP9.57□□□□□ -0.88
HDAC2-208ENST00000520746 CCDC102AQ96A19 550 aa9.57□□□□□ -0.88
HDAC2-208ENST00000520746 GUCA2AQ02747 115 aa9.56□□□□□ -0.88
HDAC2-208ENST00000520746 CCDC24Q8N4L8 307 aa9.56□□□□□ -0.88
HDAC2-208ENST00000520746 SKOR1P84550 965 aa9.55□□□□□ -0.88
HDAC2-208ENST00000520746 WFS1O76024 890 aa9.54□□□□□ -0.88
HDAC2-208ENST00000520746 REPIN1Q9BWE0 567 aaKnown RBP9.54□□□□□ -0.88
HDAC2-208ENST00000520746 ATP13A2Q9NQ11 1180 aa9.54□□□□□ -0.88
HDAC2-208ENST00000520746 NFX1Q12986 1120 aaKnown RBP9.53□□□□□ -0.88
HDAC2-208ENST00000520746 RC3H1Q5TC82 1133 aaKnown RBP9.53□□□□□ -0.88
HDAC2-208ENST00000520746 SYMPKQ92797 1274 aaKnown RBP9.53□□□□□ -0.88
HDAC2-208ENST00000520746 HPS1Q92902 700 aa9.53□□□□□ -0.88
HDAC2-208ENST00000520746 FAM217BQ9NTX9 383 aaPredicted RBP9.53□□□□□ -0.88
HDAC2-208ENST00000520746 TULP1O00294 542 aaPredicted RBP9.52□□□□□ -0.89
HDAC2-208ENST00000520746 JUNDP17535 347 aa9.52□□□□□ -0.89
HDAC2-208ENST00000520746 WNT7BP56706 349 aa9.52□□□□□ -0.89
HDAC2-208ENST00000520746 GPCPD1Q9NPB8 672 aa9.52□□□□□ -0.89
HDAC2-208ENST00000520746 SNRPBP14678 240 aaKnown RBP9.51□□□□□ -0.89
HDAC2-208ENST00000520746 CLCN1P35523 988 aa9.5□□□□□ -0.89
HDAC2-208ENST00000520746 TRIM47Q96LD4 638 aa9.49□□□□□ -0.89
HDAC2-208ENST00000520746 RETREG3Q86VR2 466 aa9.48□□□□□ -0.89
HDAC2-208ENST00000520746 LCE2CQ5TA81 110 aa9.47□□□□□ -0.89
HDAC2-208ENST00000520746 PTCRAQ6ISU1 281 aaPredicted RBP9.47□□□□□ -0.89
HDAC2-208ENST00000520746 NUTM1Q86Y26 1132 aa9.47□□□□□ -0.89
HDAC2-208ENST00000520746 NUDT12Q9BQG2 462 aa9.47□□□□□ -0.89
HDAC2-208ENST00000520746 SENP2Q9HC62 589 aa9.47□□□□□ -0.89
HDAC2-208ENST00000520746 PCDHGC3Q9UN70 934 aa9.46□□□□□ -0.9
HDAC2-208ENST00000520746 WIPF1O43516 503 aa9.45□□□□□ -0.9
HDAC2-208ENST00000520746 ALDH1A1P00352 501 aa9.45□□□□□ -0.9
HDAC2-208ENST00000520746 FDX1P10109 184 aa9.44□□□□□ -0.9
HDAC2-208ENST00000520746 VSIG10Q8N0Z9 540 aa9.44□□□□□ -0.9
HDAC2-208ENST00000520746 TERTO14746 1132 aaKnown RBP9.43□□□□□ -0.9
HDAC2-208ENST00000520746 SIAH2O43255 324 aa9.43□□□□□ -0.9
HDAC2-208ENST00000520746 KRI1Q8N9T8 703 aaKnown RBP9.43□□□□□ -0.9
HDAC2-208ENST00000520746 KIFC2Q96AC6 838 aa9.43□□□□□ -0.9
HDAC2-208ENST00000520746 C6orf229H3BNL8 230 aa9.42□□□□□ -0.9
HDAC2-208ENST00000520746 EHBP1Q8NDI1 1231 aa9.42□□□□□ -0.9
HDAC2-208ENST00000520746 CCNYL3P0C7X3 344 aa9.41□□□□□ -0.9
HDAC2-208ENST00000520746 MS4A1P11836 297 aa9.4□□□□□ -0.9
HDAC2-208ENST00000520746 SSTR3P32745 418 aaPredicted RBP9.4□□□□□ -0.9
HDAC2-208ENST00000520746 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.4□□□□□ -0.9
HDAC2-208ENST00000520746 SH3BP2P78314 561 aa9.39□□□□□ -0.91
HDAC2-208ENST00000520746 SPIRE2Q8WWL2 714 aa9.39□□□□□ -0.91
HDAC2-208ENST00000520746 STK17AQ9UEE5 414 aa9.39□□□□□ -0.91
HDAC2-208ENST00000520746 BMP1P13497 986 aa9.38□□□□□ -0.91
HDAC2-208ENST00000520746 NDUFV2P19404 249 aa9.38□□□□□ -0.91
HDAC2-208ENST00000520746 INSM1Q01101 510 aaPredicted RBP9.38□□□□□ -0.91
HDAC2-208ENST00000520746 PTPRNQ16849 979 aa9.38□□□□□ -0.91
HDAC2-208ENST00000520746 MOXD2PA6NHM9 499 aa9.37□□□□□ -0.91
HDAC2-208ENST00000520746 TRIM46Q7Z4K8 759 aa9.37□□□□□ -0.91
HDAC2-208ENST00000520746 WASF2Q9Y6W5 498 aa9.37□□□□□ -0.91
HDAC2-208ENST00000520746 CAPN5O15484 640 aaPredicted RBP9.36□□□□□ -0.91
HDAC2-208ENST00000520746 LINC01559Q495D7 138 aa9.36□□□□□ -0.91
HDAC2-208ENST00000520746 UNC93B1Q9H1C4 597 aa9.36□□□□□ -0.91
HDAC2-208ENST00000520746 EVA1BQ9NVM1 165 aa9.35□□□□□ -0.91
HDAC2-208ENST00000520746 TTLL12Q14166 644 aaPredicted RBP9.34□□□□□ -0.91
HDAC2-208ENST00000520746 PRR7Q8TB68 274 aa9.34□□□□□ -0.91
HDAC2-208ENST00000520746 BAP1Q92560 729 aa9.34□□□□□ -0.91
HDAC2-208ENST00000520746 TLL2Q9Y6L7 1015 aa9.34□□□□□ -0.91
HDAC2-208ENST00000520746 KCNH2Q12809 1159 aa9.33□□□□□ -0.92
HDAC2-208ENST00000520746 AMHR2Q16671 573 aa9.33□□□□□ -0.92
HDAC2-208ENST00000520746 BARGINQ6ZT62 677 aa9.33□□□□□ -0.92
HDAC2-208ENST00000520746 MTMR2Q13614 643 aa9.32□□□□□ -0.92
HDAC2-208ENST00000520746 GIGYF2Q6Y7W6 1299 aaKnown RBP9.32□□□□□ -0.92
HDAC2-208ENST00000520746 NXF1Q9UBU9 619 aaKnown RBP9.32□□□□□ -0.92
HDAC2-208ENST00000520746 ZMYND10O75800 440 aa9.31□□□□□ -0.92
HDAC2-208ENST00000520746 DESI1Q6ICB0 168 aa9.31□□□□□ -0.92
HDAC2-208ENST00000520746 ZNF511Q8NB15 262 aa9.31□□□□□ -0.92
HDAC2-208ENST00000520746 SPDYE5A6NIY4 337 aa9.3□□□□□ -0.92
HDAC2-208ENST00000520746 VARSP26640 1264 aaKnown RBP9.29□□□□□ -0.92
HDAC2-208ENST00000520746 SLC16A10Q8TF71 515 aa9.29□□□□□ -0.92
HDAC2-208ENST00000520746 BEGAINQ9BUH8 593 aa9.29□□□□□ -0.92
HDAC2-208ENST00000520746 MPNDQ8N594 471 aa9.28□□□□□ -0.92
HDAC2-208ENST00000520746 NNTQ13423 1086 aa9.27□□□□□ -0.93
HDAC2-208ENST00000520746 ZC3H15Q8WU90 426 aaKnown RBP9.27□□□□□ -0.93
HDAC2-208ENST00000520746 ZFP42Q96MM3 310 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms