RNA–Protein interactions for RNA: ENST00000520254.5

FAM49B-217, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 4

Gene FAM49B, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-217ENST00000520254 CDC42BPGQ6DT37 1551 aa27.36■■□□□ 1.97
FAM49B-217ENST00000520254 PRAM1Q96QH2 718 aa27.36■■□□□ 1.97
FAM49B-217ENST00000520254 PLEKHH1Q9ULM0 1364 aa27.35■■□□□ 1.97
FAM49B-217ENST00000520254 SAFB2Q14151 953 aaKnown RBP eCLIP27.34■■□□□ 1.97
FAM49B-217ENST00000520254 PHLPP1O60346 1717 aa27.31■■□□□ 1.96
FAM49B-217ENST00000520254 BRINP3Q76B58 766 aa27.31■■□□□ 1.96
FAM49B-217ENST00000520254 C1orf167Q5SNV9 1468 aa27.3■■□□□ 1.96
FAM49B-217ENST00000520254 AHDC1Q5TGY3 1603 aaPredicted RBP27.27■■□□□ 1.96
FAM49B-217ENST00000520254 ROCK2O75116 1388 aaKnown RBP27.24■■□□□ 1.95
FAM49B-217ENST00000520254 CLSPNQ9HAW4 1339 aa27.23■■□□□ 1.95
FAM49B-217ENST00000520254 NUTM2FA1L443 756 aa27.23■■□□□ 1.95
FAM49B-217ENST00000520254 NBPF1Q3BBV0 1214 aa27.23■■□□□ 1.95
FAM49B-217ENST00000520254 ESCO1Q5FWF5 840 aa27.23■■□□□ 1.95
FAM49B-217ENST00000520254 ARHGEF28Q8N1W1 1705 aaKnown RBP27.23■■□□□ 1.95
FAM49B-217ENST00000520254 MINK1Q8N4C8 1332 aaPredicted RBP27.22■■□□□ 1.95
FAM49B-217ENST00000520254 EIF3AQ14152 1382 aaKnown RBP27.22■■□□□ 1.95
FAM49B-217ENST00000520254 FMN2Q9NZ56 1722 aa27.21■■□□□ 1.95
FAM49B-217ENST00000520254 TRPM1Q7Z4N2 1603 aa27.21■■□□□ 1.95
FAM49B-217ENST00000520254 CCER1Q8TC90 406 aaPredicted RBP27.21■■□□□ 1.95
FAM49B-217ENST00000520254 COL16A1Q07092 1604 aaPredicted RBP27.2■■□□□ 1.95
FAM49B-217ENST00000520254 ADGRB2O60241 1585 aa27.2■■□□□ 1.94
FAM49B-217ENST00000520254 HIRIP3Q9BW71 556 aaPredicted RBP27.2■■□□□ 1.94
FAM49B-217ENST00000520254 JCADQ9P266 1359 aa27.2■■□□□ 1.94
FAM49B-217ENST00000520254 ORAI2Q96SN7 254 aa27.19■■□□□ 1.94
FAM49B-217ENST00000520254 DISP3Q9P2K9 1392 aa27.19■■□□□ 1.94
FAM49B-217ENST00000520254 NHSL1Q5SYE7 1610 aa27.19■■□□□ 1.94
FAM49B-217ENST00000520254 MED1Q15648 1581 aaPredicted RBP27.15■■□□□ 1.94
FAM49B-217ENST00000520254 NPHP3Q7Z494 1330 aa27.15■■□□□ 1.94
FAM49B-217ENST00000520254 CENPJQ9HC77 1338 aaPredicted RBP27.15■■□□□ 1.94
FAM49B-217ENST00000520254 LRRC59Q96AG4 307 aaKnown RBP27.13■■□□□ 1.93
FAM49B-217ENST00000520254 PHF23Q9BUL5 403 aaPredicted RBP27.13■■□□□ 1.93
FAM49B-217ENST00000520254 ANKARQ7Z5J8 1434 aa27.13■■□□□ 1.93
FAM49B-217ENST00000520254 KIF1AQ12756 1690 aa27.12■■□□□ 1.93
FAM49B-217ENST00000520254 WASLO00401 505 aaPredicted RBP27.12■■□□□ 1.93
FAM49B-217ENST00000520254 DDX17Q92841 729 aaKnown RBP27.12■■□□□ 1.93
FAM49B-217ENST00000520254 NBPF8Q3BBV2 869 aa27.11■■□□□ 1.93
FAM49B-217ENST00000520254 RALGAPBQ86X10 1494 aa27.09■■□□□ 1.93
FAM49B-217ENST00000520254 CARD11Q9BXL7 1154 aa27.09■■□□□ 1.93
FAM49B-217ENST00000520254 TULP4Q9NRJ4 1543 aa27.09■■□□□ 1.93
FAM49B-217ENST00000520254 PHF8Q9UPP1 1060 aa27.08■■□□□ 1.93
FAM49B-217ENST00000520254 SPATA31A6Q5VVP1 1343 aa27.08■■□□□ 1.93
FAM49B-217ENST00000520254 FOXO3O43524 673 aa27.07■■□□□ 1.92
FAM49B-217ENST00000520254 TIMELESSQ9UNS1 1208 aa27.07■■□□□ 1.92
FAM49B-217ENST00000520254 SHPRHQ149N8 1683 aa27.07■■□□□ 1.92
FAM49B-217ENST00000520254 QRICH2Q9H0J4 1663 aa27.06■■□□□ 1.92
FAM49B-217ENST00000520254 GPRASP1Q5JY77 1395 aa27.06■■□□□ 1.92
FAM49B-217ENST00000520254 SOS2Q07890 1332 aaPredicted RBP27.05■■□□□ 1.92
FAM49B-217ENST00000520254 MEX3CQ5U5Q3 659 aaKnown RBP27.03■■□□□ 1.92
FAM49B-217ENST00000520254 CDK19Q9BWU1 502 aa27.03■■□□□ 1.92
FAM49B-217ENST00000520254 SRPK2P78362 688 aaKnown RBP27.02■■□□□ 1.92
FAM49B-217ENST00000520254 XPCQ01831 940 aaPredicted RBP27.02■■□□□ 1.92
FAM49B-217ENST00000520254 USP32Q8NFA0 1604 aa27.01■■□□□ 1.92
FAM49B-217ENST00000520254 PSME1Q06323 249 aa27.01■■□□□ 1.91
FAM49B-217ENST00000520254 RGPD8O14715 1765 aaPredicted RBP27.01■■□□□ 1.91
FAM49B-217ENST00000520254 ITSN1Q15811 1721 aa27.01■■□□□ 1.91
FAM49B-217ENST00000520254 PMFBP1Q8TBY8 1022 aa27■■□□□ 1.91
FAM49B-217ENST00000520254 PXDNQ92626 1479 aa27■■□□□ 1.91
FAM49B-217ENST00000520254 PNPLA6Q8IY17 1366 aa26.99■■□□□ 1.91
FAM49B-217ENST00000520254 NUTM2BA6NNL0 878 aaPredicted RBP26.99■■□□□ 1.91
FAM49B-217ENST00000520254 NUTM2EB1AL46 878 aaPredicted RBP26.99■■□□□ 1.91
FAM49B-217ENST00000520254 NUTM2AQ8IVF1 878 aaPredicted RBP26.99■■□□□ 1.91
FAM49B-217ENST00000520254 NUDT16Q96DE0 195 aaKnown RBP26.99■■□□□ 1.91
FAM49B-217ENST00000520254 KRT28Q7Z3Y7 464 aa26.98■■□□□ 1.91
FAM49B-217ENST00000520254 NGDNQ8NEJ9 315 aaKnown RBP26.98■■□□□ 1.91
FAM49B-217ENST00000520254 ATP7BP35670 1465 aa26.98■■□□□ 1.91
FAM49B-217ENST00000520254 EVC2Q86UK5 1308 aa26.97■■□□□ 1.91
FAM49B-217ENST00000520254 PRR36Q9H6K5 1346 aa26.97■■□□□ 1.91
FAM49B-217ENST00000520254 CCDC61Q9Y6R9 512 aa26.93■■□□□ 1.9
FAM49B-217ENST00000520254 LRP6O75581 1613 aa26.91■■□□□ 1.9
FAM49B-217ENST00000520254 LMOD2Q6P5Q4 547 aa26.91■■□□□ 1.9
FAM49B-217ENST00000520254 CABP2Q9NPB3 220 aa26.91■■□□□ 1.9
FAM49B-217ENST00000520254 TNS3Q68CZ2 1445 aa26.9■■□□□ 1.9
FAM49B-217ENST00000520254 SBNO1A3KN83 1393 aa26.89■■□□□ 1.9
FAM49B-217ENST00000520254 SPATA31A3Q5VYP0 1347 aa26.89■■□□□ 1.89
FAM49B-217ENST00000520254 SBNO2Q9Y2G9 1366 aa26.88■■□□□ 1.89
FAM49B-217ENST00000520254 HAP1P54257 671 aaPredicted RBP26.88■■□□□ 1.89
FAM49B-217ENST00000520254 PPIP5K1Q6PFW1 1433 aa26.88■■□□□ 1.89
FAM49B-217ENST00000520254 TOPAZ1Q8N9V7 1692 aa26.88■■□□□ 1.89
FAM49B-217ENST00000520254 ARHGEF10O15013 1369 aa26.87■■□□□ 1.89
FAM49B-217ENST00000520254 COL22A1Q8NFW1 1626 aaPredicted RBP26.87■■□□□ 1.89
FAM49B-217ENST00000520254 PAK3O75914 559 aaPredicted RBP26.85■■□□□ 1.89
FAM49B-217ENST00000520254 SLC24A1O60721 1099 aa26.84■■□□□ 1.89
FAM49B-217ENST00000520254 ADAMTS2O95450 1211 aa26.84■■□□□ 1.89
FAM49B-217ENST00000520254 ATAD2Q6PL18 1390 aa26.84■■□□□ 1.89
FAM49B-217ENST00000520254 ACEP12821 1306 aa26.83■■□□□ 1.89
FAM49B-217ENST00000520254 USP47Q96K76 1375 aa26.83■■□□□ 1.88
FAM49B-217ENST00000520254 PLEKHG3A1L390 1219 aa26.82■■□□□ 1.88
FAM49B-217ENST00000520254 C8orf37Q96NL8 207 aa26.82■■□□□ 1.88
FAM49B-217ENST00000520254 PLEKHG5O94827 1062 aa26.81■■□□□ 1.88
FAM49B-217ENST00000520254 POLR3AO14802 1390 aaPredicted RBP26.81■■□□□ 1.88
FAM49B-217ENST00000520254 ZNF772Q68DY9 489 aaPredicted RBP26.8■■□□□ 1.88
FAM49B-217ENST00000520254 ST20-MTHFSA0A0A6YYL1 179 aa26.79■■□□□ 1.88
FAM49B-217ENST00000520254 NGLY1Q96IV0 654 aa26.78■■□□□ 1.88
FAM49B-217ENST00000520254 CABP1Q9NZU7 370 aa26.78■■□□□ 1.88
FAM49B-217ENST00000520254 TRPM3Q9HCF6 1732 aaPredicted RBP26.78■■□□□ 1.88
FAM49B-217ENST00000520254 ILDR2Q71H61 639 aa26.76■■□□□ 1.87
FAM49B-217ENST00000520254 AFF2P51816 1311 aa26.75■■□□□ 1.87
FAM49B-217ENST00000520254 RGS17Q9UGC6 210 aaPredicted RBP26.73■■□□□ 1.87
FAM49B-217ENST00000520254 TMF1P82094 1093 aa26.72■■□□□ 1.87
FAM49B-217ENST00000520254 TMC1Q8TDI8 760 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms