RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 TESK2Q96S53 571 aa24.99■■□□□ 1.59
SDC2-205ENST00000520233 QRICH2Q9H0J4 1663 aa24.98■■□□□ 1.59
SDC2-205ENST00000520233 HIRIP3Q9BW71 556 aaPredicted RBP24.97■■□□□ 1.59
SDC2-205ENST00000520233 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.96■■□□□ 1.59
SDC2-205ENST00000520233 RBM33Q96EV2 1170 aaKnown RBP24.96■■□□□ 1.59
SDC2-205ENST00000520233 MINK1Q8N4C8 1332 aaPredicted RBP24.95■■□□□ 1.58
SDC2-205ENST00000520233 ADGRL3Q9HAR2 1447 aa24.94■■□□□ 1.58
SDC2-205ENST00000520233 ADGRB2O60241 1585 aa24.93■■□□□ 1.58
SDC2-205ENST00000520233 C14orf37Q86TY3 774 aa24.92■■□□□ 1.58
SDC2-205ENST00000520233 TMF1P82094 1093 aa24.91■■□□□ 1.58
SDC2-205ENST00000520233 NALCNQ8IZF0 1738 aa24.9■■□□□ 1.58
SDC2-205ENST00000520233 C19orf44Q9H6X5 657 aa24.9■■□□□ 1.58
SDC2-205ENST00000520233 EVC2Q86UK5 1308 aa24.89■■□□□ 1.58
SDC2-205ENST00000520233 XIRP1Q702N8 1843 aaKnown RBP24.89■■□□□ 1.58
SDC2-205ENST00000520233 WASLO00401 505 aaPredicted RBP24.88■■□□□ 1.57
SDC2-205ENST00000520233 TULP4Q9NRJ4 1543 aa24.87■■□□□ 1.57
SDC2-205ENST00000520233 MSH6P52701 1360 aa24.87■■□□□ 1.57
SDC2-205ENST00000520233 CDC42BPGQ6DT37 1551 aa24.87■■□□□ 1.57
SDC2-205ENST00000520233 DISP3Q9P2K9 1392 aa24.86■■□□□ 1.57
SDC2-205ENST00000520233 CDK19Q9BWU1 502 aa24.86■■□□□ 1.57
SDC2-205ENST00000520233 DCCP43146 1447 aa24.86■■□□□ 1.57
SDC2-205ENST00000520233 CDCA8Q53HL2 280 aa24.84■■□□□ 1.57
SDC2-205ENST00000520233 PUS7Q96PZ0 661 aaKnown RBP24.84■■□□□ 1.57
SDC2-205ENST00000520233 C11orf95C9JLR9 678 aaPredicted RBP24.82■■□□□ 1.56
SDC2-205ENST00000520233 SRPK2P78362 688 aaKnown RBP24.82■■□□□ 1.56
SDC2-205ENST00000520233 ATF3P18847 181 aa24.81■■□□□ 1.56
SDC2-205ENST00000520233 ZNF316A6NFI3 1004 aaPredicted RBP24.8■■□□□ 1.56
SDC2-205ENST00000520233 CADPS2Q86UW7 1296 aa24.8■■□□□ 1.56
SDC2-205ENST00000520233 CABP2Q9NPB3 220 aa24.8■■□□□ 1.56
SDC2-205ENST00000520233 IQSEC2Q5JU85 1478 aa24.79■■□□□ 1.56
SDC2-205ENST00000520233 FMN2Q9NZ56 1722 aa24.79■■□□□ 1.56
SDC2-205ENST00000520233 ANKARQ7Z5J8 1434 aa24.78■■□□□ 1.56
SDC2-205ENST00000520233 CERKQ8TCT0 537 aa24.77■■□□□ 1.56
SDC2-205ENST00000520233 KIF7Q2M1P5 1343 aa24.77■■□□□ 1.56
SDC2-205ENST00000520233 NUDT16Q96DE0 195 aaKnown RBP24.76■■□□□ 1.55
SDC2-205ENST00000520233 ATAD2Q6PL18 1390 aa24.76■■□□□ 1.55
SDC2-205ENST00000520233 WASHC2AQ641Q2 1341 aa24.75■■□□□ 1.55
SDC2-205ENST00000520233 PRR36Q9H6K5 1346 aa24.75■■□□□ 1.55
SDC2-205ENST00000520233 CCDC7Q96M83 1385 aa24.75■■□□□ 1.55
SDC2-205ENST00000520233 NUTM2FA1L443 756 aa24.74■■□□□ 1.55
SDC2-205ENST00000520233 MST1RQ04912 1400 aa24.74■■□□□ 1.55
SDC2-205ENST00000520233 ATP7BP35670 1465 aa24.74■■□□□ 1.55
SDC2-205ENST00000520233 CCDC61Q9Y6R9 512 aa24.73■■□□□ 1.55
SDC2-205ENST00000520233 USP32Q8NFA0 1604 aa24.72■■□□□ 1.55
SDC2-205ENST00000520233 C1orf167Q5SNV9 1468 aa24.71■■□□□ 1.55
SDC2-205ENST00000520233 POLR3GLQ9BT43 218 aa24.71■■□□□ 1.55
SDC2-205ENST00000520233 SLAIN2Q9P270 581 aa24.69■■□□□ 1.54
SDC2-205ENST00000520233 NINLQ9Y2I6 1382 aa24.68■■□□□ 1.54
SDC2-205ENST00000520233 TOPAZ1Q8N9V7 1692 aa24.67■■□□□ 1.54
SDC2-205ENST00000520233 PPIP5K1Q6PFW1 1433 aa24.67■■□□□ 1.54
SDC2-205ENST00000520233 CABP1Q9NZU7 370 aa24.66■■□□□ 1.54
SDC2-205ENST00000520233 ITSN1Q15811 1721 aa24.66■■□□□ 1.54
SDC2-205ENST00000520233 PLEKHG3A1L390 1219 aa24.65■■□□□ 1.54
SDC2-205ENST00000520233 TOM1O60784 492 aa24.65■■□□□ 1.54
SDC2-205ENST00000520233 ESCO1Q5FWF5 840 aa24.65■■□□□ 1.54
SDC2-205ENST00000520233 TMC1Q8TDI8 760 aa24.65■■□□□ 1.54
SDC2-205ENST00000520233 ORAI2Q96SN7 254 aa24.64■■□□□ 1.54
SDC2-205ENST00000520233 SLC12A5Q9H2X9 1139 aa24.64■■□□□ 1.54
SDC2-205ENST00000520233 RGPD8O14715 1765 aaPredicted RBP24.64■■□□□ 1.53
SDC2-205ENST00000520233 PHF8Q9UPP1 1060 aa24.63■■□□□ 1.53
SDC2-205ENST00000520233 MYOM1P52179 1685 aa24.62■■□□□ 1.53
SDC2-205ENST00000520233 UBAP1LF5GYI3 381 aa24.6■■□□□ 1.53
SDC2-205ENST00000520233 BRINP3Q76B58 766 aa24.6■■□□□ 1.53
SDC2-205ENST00000520233 PMFBP1Q8TBY8 1022 aa24.6■■□□□ 1.53
SDC2-205ENST00000520233 POLR3AO14802 1390 aaPredicted RBP24.59■■□□□ 1.53
SDC2-205ENST00000520233 ILDR1Q86SU0 546 aaPredicted RBP24.59■■□□□ 1.53
SDC2-205ENST00000520233 TERF2IPQ9NYB0 399 aa24.59■■□□□ 1.53
SDC2-205ENST00000520233 KIF1AQ12756 1690 aa24.59■■□□□ 1.53
SDC2-205ENST00000520233 CPSF1Q10570 1443 aaKnown RBP24.58■■□□□ 1.53
SDC2-205ENST00000520233 ACEP12821 1306 aa24.58■■□□□ 1.52
SDC2-205ENST00000520233 CD163L1Q9NR16 1453 aa24.58■■□□□ 1.52
SDC2-205ENST00000520233 ANKRD36BQ8N2N9 1353 aa24.57■■□□□ 1.52
SDC2-205ENST00000520233 HDGFL2Q7Z4V5 671 aaPredicted RBP24.57■■□□□ 1.52
SDC2-205ENST00000520233 NGDNQ8NEJ9 315 aaKnown RBP24.57■■□□□ 1.52
SDC2-205ENST00000520233 FBXO41Q8TF61 875 aa24.57■■□□□ 1.52
SDC2-205ENST00000520233 ZNF692Q9BU19 519 aaPredicted RBP24.56■■□□□ 1.52
SDC2-205ENST00000520233 A0A1W2PP64 1363 aa24.54■■□□□ 1.52
SDC2-205ENST00000520233 PANK3Q9H999 370 aa24.54■■□□□ 1.52
SDC2-205ENST00000520233 DDX10Q13206 875 aaKnown RBP24.53■■□□□ 1.52
SDC2-205ENST00000520233 FOXO3O43524 673 aa24.52■■□□□ 1.52
SDC2-205ENST00000520233 ROBO1Q9Y6N7 1651 aa24.51■■□□□ 1.51
SDC2-205ENST00000520233 PIP4K2BP78356 416 aa24.51■■□□□ 1.51
SDC2-205ENST00000520233 NPHP3Q7Z494 1330 aa24.51■■□□□ 1.51
SDC2-205ENST00000520233 AKAP12Q02952 1782 aa24.51■■□□□ 1.51
SDC2-205ENST00000520233 KTN1Q86UP2 1357 aaKnown RBP24.51■■□□□ 1.51
SDC2-205ENST00000520233 PSME1Q06323 249 aa24.5■■□□□ 1.51
SDC2-205ENST00000520233 USP6P35125 1406 aa24.5■■□□□ 1.51
SDC2-205ENST00000520233 CARD14Q9BXL6 1004 aa24.49■■□□□ 1.51
SDC2-205ENST00000520233 BRD4O60885 1362 aaPredicted RBP24.49■■□□□ 1.51
SDC2-205ENST00000520233 KRT28Q7Z3Y7 464 aa24.48■■□□□ 1.51
SDC2-205ENST00000520233 MON2Q7Z3U7 1717 aa24.47■■□□□ 1.51
SDC2-205ENST00000520233 SCAF1Q9H7N4 1312 aaKnown RBP24.47■■□□□ 1.51
SDC2-205ENST00000520233 EDC4Q6P2E9 1401 aaKnown RBP24.46■■□□□ 1.51
SDC2-205ENST00000520233 PER1O15534 1290 aaPredicted RBP24.46■■□□□ 1.51
SDC2-205ENST00000520233 DDX17Q92841 729 aaKnown RBP24.46■■□□□ 1.51
SDC2-205ENST00000520233 NHSL1Q5SYE7 1610 aa24.46■■□□□ 1.51
SDC2-205ENST00000520233 SSH2Q76I76 1423 aa24.45■■□□□ 1.51
SDC2-205ENST00000520233 NSD3Q9BZ95 1437 aa24.45■■□□□ 1.51
SDC2-205ENST00000520233 SOS2Q07890 1332 aaPredicted RBP24.44■■□□□ 1.5
SDC2-205ENST00000520233 AHDC1Q5TGY3 1603 aaPredicted RBP24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms