RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 C20orf194Q5TEA3 1177 aa14.17□□□□□ -0.14
PCDHGB4-201ENST00000519479 BACH2Q9BYV9 841 aa14.17□□□□□ -0.14
PCDHGB4-201ENST00000519479 DDX19BQ9UMR2 479 aa14.17□□□□□ -0.14
PCDHGB4-201ENST00000519479 MAGI2Q86UL8 1455 aa14.17□□□□□ -0.14
PCDHGB4-201ENST00000519479 NCLP19338 710 aaKnown RBP14.17□□□□□ -0.14
PCDHGB4-201ENST00000519479 SPATA31E1Q6ZUB1 1445 aa14.16□□□□□ -0.14
PCDHGB4-201ENST00000519479 PARD3Q8TEW0 1356 aa14.16□□□□□ -0.14
PCDHGB4-201ENST00000519479 PREX2Q70Z35 1606 aa14.16□□□□□ -0.14
PCDHGB4-201ENST00000519479 PDE3AQ14432 1141 aa14.16□□□□□ -0.14
PCDHGB4-201ENST00000519479 A0A0G2JS52 829 aa14.15□□□□□ -0.14
PCDHGB4-201ENST00000519479 USP35Q9P2H5 1018 aa14.15□□□□□ -0.14
PCDHGB4-201ENST00000519479 ADCY10Q96PN6 1610 aa14.15□□□□□ -0.14
PCDHGB4-201ENST00000519479 AMPHP49418 695 aa14.15□□□□□ -0.14
PCDHGB4-201ENST00000519479 WWC1Q8IX03 1113 aa14.15□□□□□ -0.14
PCDHGB4-201ENST00000519479 PER1O15534 1290 aaPredicted RBP14.14□□□□□ -0.15
PCDHGB4-201ENST00000519479 TNRQ92752 1358 aa14.14□□□□□ -0.15
PCDHGB4-201ENST00000519479 CABP1Q9NZU7 370 aa14.14□□□□□ -0.15
PCDHGB4-201ENST00000519479 AMER1Q5JTC6 1135 aaPredicted RBP14.14□□□□□ -0.15
PCDHGB4-201ENST00000519479 TSR2Q969E8 191 aaKnown RBP14.14□□□□□ -0.15
PCDHGB4-201ENST00000519479 TTC37Q6PGP7 1564 aa14.13□□□□□ -0.15
PCDHGB4-201ENST00000519479 MBD5Q9P267 1494 aa14.13□□□□□ -0.15
PCDHGB4-201ENST00000519479 EXOSC9Q06265 439 aaKnown RBP14.13□□□□□ -0.15
PCDHGB4-201ENST00000519479 SLC4A10Q6U841 1118 aa14.13□□□□□ -0.15
PCDHGB4-201ENST00000519479 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.13□□□□□ -0.15
PCDHGB4-201ENST00000519479 ZFYVE16Q7Z3T8 1539 aa14.13□□□□□ -0.15
PCDHGB4-201ENST00000519479 NOS1P29475 1434 aa14.13□□□□□ -0.15
PCDHGB4-201ENST00000519479 SKAP1Q86WV1 359 aa14.13□□□□□ -0.15
PCDHGB4-201ENST00000519479 CDK19Q9BWU1 502 aa14.13□□□□□ -0.15
PCDHGB4-201ENST00000519479 STK31Q9BXU1 1019 aa14.13□□□□□ -0.15
PCDHGB4-201ENST00000519479 ABCC1P33527 1531 aa14.12□□□□□ -0.15
PCDHGB4-201ENST00000519479 ANKRD45Q5TZF3 282 aa14.12□□□□□ -0.15
PCDHGB4-201ENST00000519479 DUSP27Q5VZP5 1158 aa14.12□□□□□ -0.15
PCDHGB4-201ENST00000519479 OS9Q13438 667 aaPredicted RBP14.12□□□□□ -0.15
PCDHGB4-201ENST00000519479 IDI1Q13907 227 aa14.12□□□□□ -0.15
PCDHGB4-201ENST00000519479 AAMPQ13685 434 aa14.12□□□□□ -0.15
PCDHGB4-201ENST00000519479 WDR63Q8IWG1 891 aa14.12□□□□□ -0.15
PCDHGB4-201ENST00000519479 MLH3Q9UHC1 1453 aa14.12□□□□□ -0.15
PCDHGB4-201ENST00000519479 LTV1Q96GA3 475 aaPredicted RBP14.12□□□□□ -0.15
PCDHGB4-201ENST00000519479 RIMBP3CA6NJZ7 1639 aa14.11□□□□□ -0.15
PCDHGB4-201ENST00000519479 RIMBP3BA6NNM3 1639 aa14.11□□□□□ -0.15
PCDHGB4-201ENST00000519479 RIMBP3Q9UFD9 1639 aa14.11□□□□□ -0.15
PCDHGB4-201ENST00000519479 KIF16BQ96L93 1317 aa14.11□□□□□ -0.15
PCDHGB4-201ENST00000519479 PRKAR2BP31323 418 aa14.11□□□□□ -0.15
PCDHGB4-201ENST00000519479 TRIM44Q96DX7 344 aaPredicted RBP14.11□□□□□ -0.15
PCDHGB4-201ENST00000519479 CFAP44Q96MT7 982 aa14.1□□□□□ -0.15
PCDHGB4-201ENST00000519479 ADGBQ8N7X0 1667 aa14.1□□□□□ -0.15
PCDHGB4-201ENST00000519479 SAMD9LQ8IVG5 1584 aa14.1□□□□□ -0.15
PCDHGB4-201ENST00000519479 C14orf93Q9H972 538 aaKnown RBP14.1□□□□□ -0.15
PCDHGB4-201ENST00000519479 FBXO31Q5XUX0 539 aaPredicted RBP14.09□□□□□ -0.15
PCDHGB4-201ENST00000519479 GNAI1P63096 354 aa14.09□□□□□ -0.15
PCDHGB4-201ENST00000519479 GZF1Q9H116 711 aaPredicted RBP14.09□□□□□ -0.15
PCDHGB4-201ENST00000519479 HMMRO75330 724 aa14.08□□□□□ -0.16
PCDHGB4-201ENST00000519479 ATF3P18847 181 aa14.07□□□□□ -0.16
PCDHGB4-201ENST00000519479 ATAD2Q6PL18 1390 aa14.07□□□□□ -0.16
PCDHGB4-201ENST00000519479 NAP1L5Q96NT1 182 aaPredicted RBP14.07□□□□□ -0.16
PCDHGB4-201ENST00000519479 LNPKQ9C0E8 428 aa14.07□□□□□ -0.16
PCDHGB4-201ENST00000519479 PDZRN3Q9UPQ7 1066 aa14.06□□□□□ -0.16
PCDHGB4-201ENST00000519479 COL17A1Q9UMD9 1497 aaPredicted RBP14.06□□□□□ -0.16
PCDHGB4-201ENST00000519479 API5Q9BZZ5 524 aaKnown RBP14.05□□□□□ -0.16
PCDHGB4-201ENST00000519479 LRPPRCP42704 1394 aaKnown RBP14.05□□□□□ -0.16
PCDHGB4-201ENST00000519479 ABCA9Q8IUA7 1624 aa14.05□□□□□ -0.16
PCDHGB4-201ENST00000519479 L1TD1Q5T7N2 865 aaKnown RBP14.05□□□□□ -0.16
PCDHGB4-201ENST00000519479 NKTRP30414 1462 aaKnown RBP14.05□□□□□ -0.16
PCDHGB4-201ENST00000519479 CEBPAP49715 358 aaPredicted RBP14.05□□□□□ -0.16
PCDHGB4-201ENST00000519479 TPRNQ4KMQ1 711 aa14.05□□□□□ -0.16
PCDHGB4-201ENST00000519479 PROSER2Q86WR7 435 aaPredicted RBP14.05□□□□□ -0.16
PCDHGB4-201ENST00000519479 ZMYM3Q14202 1370 aa14.04□□□□□ -0.16
PCDHGB4-201ENST00000519479 FOXD4L1Q9NU39 408 aa14.04□□□□□ -0.16
PCDHGB4-201ENST00000519479 NINLQ9Y2I6 1382 aa14.04□□□□□ -0.16
PCDHGB4-201ENST00000519479 EIF2AK4Q9P2K8 1649 aaKnown RBP14.04□□□□□ -0.16
PCDHGB4-201ENST00000519479 NOB1Q9ULX3 412 aaKnown RBP14.04□□□□□ -0.16
PCDHGB4-201ENST00000519479 MCCP23508 829 aa14.03□□□□□ -0.16
PCDHGB4-201ENST00000519479 TMPOP42166 694 aaKnown RBP14.03□□□□□ -0.16
PCDHGB4-201ENST00000519479 GBP4Q96PP9 640 aa14.03□□□□□ -0.16
PCDHGB4-201ENST00000519479 ASXL1Q8IXJ9 1541 aa14.03□□□□□ -0.16
PCDHGB4-201ENST00000519479 MAST1Q9Y2H9 1570 aa14.03□□□□□ -0.16
PCDHGB4-201ENST00000519479 GSE1Q14687 1217 aa14.03□□□□□ -0.16
PCDHGB4-201ENST00000519479 DMRT2Q9Y5R5 561 aa14.03□□□□□ -0.16
PCDHGB4-201ENST00000519479 RARSP54136 660 aaKnown RBP14.03□□□□□ -0.16
PCDHGB4-201ENST00000519479 WAPLQ7Z5K2 1190 aa14.03□□□□□ -0.16
PCDHGB4-201ENST00000519479 HECW2Q9P2P5 1572 aa14.03□□□□□ -0.16
PCDHGB4-201ENST00000519479 GPRASP1Q5JY77 1395 aa14.03□□□□□ -0.16
PCDHGB4-201ENST00000519479 NFKBIBQ15653 356 aa14.02□□□□□ -0.16
PCDHGB4-201ENST00000519479 MVPQ14764 893 aaKnown RBP14.02□□□□□ -0.16
PCDHGB4-201ENST00000519479 CDC42BPAQ5VT25 1732 aa14.02□□□□□ -0.17
PCDHGB4-201ENST00000519479 CT47B1P0C2W7 299 aaPredicted RBP14.02□□□□□ -0.17
PCDHGB4-201ENST00000519479 ATF7IPQ6VMQ6 1270 aa14.02□□□□□ -0.17
PCDHGB4-201ENST00000519479 CARD14Q9BXL6 1004 aa14.01□□□□□ -0.17
PCDHGB4-201ENST00000519479 KCNJ4P48050 445 aa14.01□□□□□ -0.17
PCDHGB4-201ENST00000519479 SLC26A8Q96RN1 970 aa14.01□□□□□ -0.17
PCDHGB4-201ENST00000519479 TRIM6-TRIM34B2RNG4 842 aa14□□□□□ -0.17
PCDHGB4-201ENST00000519479 C22orf23Q9BZE7 217 aa14□□□□□ -0.17
PCDHGB4-201ENST00000519479 PLEKHH1Q9ULM0 1364 aa14□□□□□ -0.17
PCDHGB4-201ENST00000519479 FCHSD2O94868 740 aa14□□□□□ -0.17
PCDHGB4-201ENST00000519479 YEATS2Q9ULM3 1422 aa13.99□□□□□ -0.17
PCDHGB4-201ENST00000519479 PSME1Q06323 249 aa13.99□□□□□ -0.17
PCDHGB4-201ENST00000519479 TWISTNBQ3B726 338 aaPredicted RBP13.99□□□□□ -0.17
PCDHGB4-201ENST00000519479 NECTIN2Q92692 538 aa13.98□□□□□ -0.17
PCDHGB4-201ENST00000519479 CHMP4AQ9BY43 222 aa13.98□□□□□ -0.17
PCDHGB4-201ENST00000519479 TSPOAP1O95153 1857 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms