RNA–Protein interactions for RNA: ENST00000519047.5

HMBOX1-206, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-206ENST00000519047 SIRT1Q96EB6 747 aa9.24□□□□□ -0.93
HMBOX1-206ENST00000519047 PTCH1Q13635 1447 aa9.23□□□□□ -0.93
HMBOX1-206ENST00000519047 CCER1Q8TC90 406 aaPredicted RBP9.23□□□□□ -0.93
HMBOX1-206ENST00000519047 C19orf44Q9H6X5 657 aa9.23□□□□□ -0.93
HMBOX1-206ENST00000519047 STK26Q9P289 416 aa9.23□□□□□ -0.93
HMBOX1-206ENST00000519047 TIMELESSQ9UNS1 1208 aa9.23□□□□□ -0.93
HMBOX1-206ENST00000519047 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.23□□□□□ -0.93
HMBOX1-206ENST00000519047 TONSLQ96HA7 1378 aa9.23□□□□□ -0.93
HMBOX1-206ENST00000519047 UBAP1LF5GYI3 381 aa9.22□□□□□ -0.93
HMBOX1-206ENST00000519047 NBPF1Q3BBV0 1214 aa9.22□□□□□ -0.93
HMBOX1-206ENST00000519047 TRPM1Q7Z4N2 1603 aa9.22□□□□□ -0.93
HMBOX1-206ENST00000519047 FAM135BQ49AJ0 1406 aa9.21□□□□□ -0.93
HMBOX1-206ENST00000519047 TOM1O60784 492 aa9.21□□□□□ -0.93
HMBOX1-206ENST00000519047 NBPF8Q3BBV2 869 aa9.21□□□□□ -0.93
HMBOX1-206ENST00000519047 NALCNQ8IZF0 1738 aa9.21□□□□□ -0.94
HMBOX1-206ENST00000519047 DLC1Q96QB1 1528 aa9.2□□□□□ -0.94
HMBOX1-206ENST00000519047 AMER1Q5JTC6 1135 aaPredicted RBP9.2□□□□□ -0.94
HMBOX1-206ENST00000519047 WAPLQ7Z5K2 1190 aa9.2□□□□□ -0.94
HMBOX1-206ENST00000519047 MSH6P52701 1360 aa9.2□□□□□ -0.94
HMBOX1-206ENST00000519047 ADGRL3Q9HAR2 1447 aa9.2□□□□□ -0.94
HMBOX1-206ENST00000519047 ILDR1Q86SU0 546 aaPredicted RBP9.2□□□□□ -0.94
HMBOX1-206ENST00000519047 DCCP43146 1447 aa9.19□□□□□ -0.94
HMBOX1-206ENST00000519047 C14orf37Q86TY3 774 aa9.19□□□□□ -0.94
HMBOX1-206ENST00000519047 TRAK1Q9UPV9 953 aa9.19□□□□□ -0.94
HMBOX1-206ENST00000519047 PLEKHH1Q9ULM0 1364 aa9.19□□□□□ -0.94
HMBOX1-206ENST00000519047 ARHGEF28Q8N1W1 1705 aaKnown RBP9.18□□□□□ -0.94
HMBOX1-206ENST00000519047 CADPS2Q86UW7 1296 aa9.18□□□□□ -0.94
HMBOX1-206ENST00000519047 SLAIN2Q9P270 581 aa9.18□□□□□ -0.94
HMBOX1-206ENST00000519047 GPRASP1Q5JY77 1395 aa9.17□□□□□ -0.94
HMBOX1-206ENST00000519047 ATF3P18847 181 aa9.17□□□□□ -0.94
HMBOX1-206ENST00000519047 C1QBPQ07021 282 aaKnown RBP9.17□□□□□ -0.94
HMBOX1-206ENST00000519047 PRAM1Q96QH2 718 aa9.17□□□□□ -0.94
HMBOX1-206ENST00000519047 PIP4K2BP78356 416 aa9.16□□□□□ -0.94
HMBOX1-206ENST00000519047 SPINK5Q9NQ38 1064 aaPredicted RBP9.16□□□□□ -0.94
HMBOX1-206ENST00000519047 POGKQ9P215 609 aa9.16□□□□□ -0.94
HMBOX1-206ENST00000519047 MST1RQ04912 1400 aa9.16□□□□□ -0.94
HMBOX1-206ENST00000519047 RALGAPBQ86X10 1494 aa9.15□□□□□ -0.94
HMBOX1-206ENST00000519047 ROCK2O75116 1388 aaKnown RBP9.15□□□□□ -0.94
HMBOX1-206ENST00000519047 CDC42BPGQ6DT37 1551 aa9.15□□□□□ -0.94
HMBOX1-206ENST00000519047 SAFB2Q14151 953 aaKnown RBP eCLIP9.15□□□□□ -0.95
HMBOX1-206ENST00000519047 RTN4Q9NQC3 1192 aaKnown RBP9.15□□□□□ -0.95
HMBOX1-206ENST00000519047 RGPD8O14715 1765 aaPredicted RBP9.15□□□□□ -0.95
HMBOX1-206ENST00000519047 ROBO1Q9Y6N7 1651 aa9.14□□□□□ -0.95
HMBOX1-206ENST00000519047 FMN2Q9NZ56 1722 aa9.14□□□□□ -0.95
HMBOX1-206ENST00000519047 ADGRB2O60241 1585 aa9.14□□□□□ -0.95
HMBOX1-206ENST00000519047 C1orf167Q5SNV9 1468 aa9.12□□□□□ -0.95
HMBOX1-206ENST00000519047 BRINP3Q76B58 766 aa9.12□□□□□ -0.95
HMBOX1-206ENST00000519047 CARD11Q9BXL7 1154 aa9.12□□□□□ -0.95
HMBOX1-206ENST00000519047 CENPJQ9HC77 1338 aaPredicted RBP9.12□□□□□ -0.95
HMBOX1-206ENST00000519047 WASLO00401 505 aaPredicted RBP9.12□□□□□ -0.95
HMBOX1-206ENST00000519047 CAPN15O75808 1086 aa9.12□□□□□ -0.95
HMBOX1-206ENST00000519047 HSPA1LP34931 641 aa9.12□□□□□ -0.95
HMBOX1-206ENST00000519047 MKRN4PQ13434 485 aaPredicted RBP9.12□□□□□ -0.95
HMBOX1-206ENST00000519047 HIRIP3Q9BW71 556 aaPredicted RBP9.12□□□□□ -0.95
HMBOX1-206ENST00000519047 MINK1Q8N4C8 1332 aaPredicted RBP9.11□□□□□ -0.95
HMBOX1-206ENST00000519047 QRICH2Q9H0J4 1663 aa9.11□□□□□ -0.95
HMBOX1-206ENST00000519047 ORAI2Q96SN7 254 aa9.11□□□□□ -0.95
HMBOX1-206ENST00000519047 USP32Q8NFA0 1604 aa9.1□□□□□ -0.95
HMBOX1-206ENST00000519047 POLA2Q14181 598 aa9.1□□□□□ -0.95
HMBOX1-206ENST00000519047 NHSL1Q5SYE7 1610 aa9.1□□□□□ -0.95
HMBOX1-206ENST00000519047 NUTM2FA1L443 756 aa9.09□□□□□ -0.95
HMBOX1-206ENST00000519047 CDK19Q9BWU1 502 aa9.09□□□□□ -0.95
HMBOX1-206ENST00000519047 EIF3AQ14152 1382 aaKnown RBP9.09□□□□□ -0.95
HMBOX1-206ENST00000519047 SBNO2Q9Y2G9 1366 aa9.09□□□□□ -0.95
HMBOX1-206ENST00000519047 AHDC1Q5TGY3 1603 aaPredicted RBP9.09□□□□□ -0.95
HMBOX1-206ENST00000519047 PHLPP1O60346 1717 aa9.08□□□□□ -0.96
HMBOX1-206ENST00000519047 ESCO1Q5FWF5 840 aa9.08□□□□□ -0.96
HMBOX1-206ENST00000519047 ANKARQ7Z5J8 1434 aa9.08□□□□□ -0.96
HMBOX1-206ENST00000519047 PRR36Q9H6K5 1346 aa9.08□□□□□ -0.96
HMBOX1-206ENST00000519047 TULP4Q9NRJ4 1543 aa9.08□□□□□ -0.96
HMBOX1-206ENST00000519047 SPDYE4A6NLX3 237 aa9.07□□□□□ -0.96
HMBOX1-206ENST00000519047 COL16A1Q07092 1604 aaPredicted RBP9.07□□□□□ -0.96
HMBOX1-206ENST00000519047 ST20-MTHFSA0A0A6YYL1 179 aa9.07□□□□□ -0.96
HMBOX1-206ENST00000519047 NUDT16Q96DE0 195 aaKnown RBP9.07□□□□□ -0.96
HMBOX1-206ENST00000519047 TESK2Q96S53 571 aa9.07□□□□□ -0.96
HMBOX1-206ENST00000519047 ITSN1Q15811 1721 aa9.06□□□□□ -0.96
HMBOX1-206ENST00000519047 KIF1AQ12756 1690 aa9.06□□□□□ -0.96
HMBOX1-206ENST00000519047 ATP7BP35670 1465 aa9.06□□□□□ -0.96
HMBOX1-206ENST00000519047 SOS2Q07890 1332 aaPredicted RBP9.06□□□□□ -0.96
HMBOX1-206ENST00000519047 FOXO3O43524 673 aa9.06□□□□□ -0.96
HMBOX1-206ENST00000519047 DDX17Q92841 729 aaKnown RBP9.06□□□□□ -0.96
HMBOX1-206ENST00000519047 PHF8Q9UPP1 1060 aa9.06□□□□□ -0.96
HMBOX1-206ENST00000519047 CCDC61Q9Y6R9 512 aa9.06□□□□□ -0.96
HMBOX1-206ENST00000519047 USP47Q96K76 1375 aa9.05□□□□□ -0.96
HMBOX1-206ENST00000519047 NPHP3Q7Z494 1330 aa9.05□□□□□ -0.96
HMBOX1-206ENST00000519047 EVC2Q86UK5 1308 aa9.05□□□□□ -0.96
HMBOX1-206ENST00000519047 SLC24A1O60721 1099 aa9.05□□□□□ -0.96
HMBOX1-206ENST00000519047 TOPAZ1Q8N9V7 1692 aa9.05□□□□□ -0.96
HMBOX1-206ENST00000519047 PLEKHG3A1L390 1219 aa9.04□□□□□ -0.96
HMBOX1-206ENST00000519047 LRRC59Q96AG4 307 aaKnown RBP9.04□□□□□ -0.96
HMBOX1-206ENST00000519047 CABP2Q9NPB3 220 aa9.04□□□□□ -0.96
HMBOX1-206ENST00000519047 PXDNQ92626 1479 aa9.04□□□□□ -0.96
HMBOX1-206ENST00000519047 SRPK2P78362 688 aaKnown RBP9.03□□□□□ -0.96
HMBOX1-206ENST00000519047 PMFBP1Q8TBY8 1022 aa9.03□□□□□ -0.96
HMBOX1-206ENST00000519047 PUS7Q96PZ0 661 aaKnown RBP9.03□□□□□ -0.96
HMBOX1-206ENST00000519047 POLR3AO14802 1390 aaPredicted RBP9.02□□□□□ -0.97
HMBOX1-206ENST00000519047 JCADQ9P266 1359 aa9.02□□□□□ -0.97
HMBOX1-206ENST00000519047 SHPRHQ149N8 1683 aa9.02□□□□□ -0.97
HMBOX1-206ENST00000519047 EIF4G2P78344 907 aaKnown RBP eCLIP9.02□□□□□ -0.971e-6■■■□□ 15.8
HMBOX1-206ENST00000519047 KRT28Q7Z3Y7 464 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms