RNA–Protein interactions for RNA: ENST00000518936.5

PCM1-210, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-210ENST00000518936 MSH6P52701 1360 aa29.92■■■□□ 2.38
PCM1-210ENST00000518936 DCCP43146 1447 aa29.91■■■□□ 2.38
PCM1-210ENST00000518936 ADGRL3Q9HAR2 1447 aa29.91■■■□□ 2.38
PCM1-210ENST00000518936 C19orf44Q9H6X5 657 aa29.91■■■□□ 2.38
PCM1-210ENST00000518936 WAPLQ7Z5K2 1190 aa29.9■■■□□ 2.38
PCM1-210ENST00000518936 ADGRB2O60241 1585 aa29.89■■■□□ 2.38
PCM1-210ENST00000518936 ST20-MTHFSA0A0A6YYL1 179 aa29.88■■■□□ 2.37
PCM1-210ENST00000518936 CDCA8Q53HL2 280 aa29.87■■■□□ 2.37
PCM1-210ENST00000518936 CADPS2Q86UW7 1296 aa29.86■■■□□ 2.37
PCM1-210ENST00000518936 EVC2Q86UK5 1308 aa29.86■■■□□ 2.37
PCM1-210ENST00000518936 CDC42BPGQ6DT37 1551 aa29.86■■■□□ 2.37
PCM1-210ENST00000518936 SAFB2Q14151 953 aaKnown RBP eCLIP29.85■■■□□ 2.37
PCM1-210ENST00000518936 ATF3P18847 181 aa29.84■■■□□ 2.37
PCM1-210ENST00000518936 PLEKHH1Q9ULM0 1364 aa29.84■■■□□ 2.37
PCM1-210ENST00000518936 NALCNQ8IZF0 1738 aa29.84■■■□□ 2.37
PCM1-210ENST00000518936 HSPA5P11021 654 aaKnown RBP29.83■■■□□ 2.37
PCM1-210ENST00000518936 TMF1P82094 1093 aa29.83■■■□□ 2.37
PCM1-210ENST00000518936 XIRP1Q702N8 1843 aaKnown RBP29.82■■■□□ 2.36
PCM1-210ENST00000518936 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.82■■■□□ 2.36
PCM1-210ENST00000518936 MINK1Q8N4C8 1332 aaPredicted RBP29.81■■■□□ 2.36
PCM1-210ENST00000518936 PUS7Q96PZ0 661 aaKnown RBP29.79■■■□□ 2.36
PCM1-210ENST00000518936 WASLO00401 505 aaPredicted RBP29.77■■■□□ 2.36
PCM1-210ENST00000518936 CERKQ8TCT0 537 aa29.77■■■□□ 2.36
PCM1-210ENST00000518936 TESK2Q96S53 571 aa29.75■■■□□ 2.35
PCM1-210ENST00000518936 ANKARQ7Z5J8 1434 aa29.74■■■□□ 2.35
PCM1-210ENST00000518936 TOM1O60784 492 aa29.73■■■□□ 2.35
PCM1-210ENST00000518936 SRPK2P78362 688 aaKnown RBP29.73■■■□□ 2.35
PCM1-210ENST00000518936 RBM33Q96EV2 1170 aaKnown RBP29.73■■■□□ 2.35
PCM1-210ENST00000518936 HIRIP3Q9BW71 556 aaPredicted RBP29.73■■■□□ 2.35
PCM1-210ENST00000518936 TULP4Q9NRJ4 1543 aa29.72■■■□□ 2.35
PCM1-210ENST00000518936 FMN2Q9NZ56 1722 aa29.72■■■□□ 2.35
PCM1-210ENST00000518936 ATAD2Q6PL18 1390 aa29.72■■■□□ 2.35
PCM1-210ENST00000518936 CDK19Q9BWU1 502 aa29.71■■■□□ 2.35
PCM1-210ENST00000518936 ITSN1Q15811 1721 aa29.69■■■□□ 2.34
PCM1-210ENST00000518936 NINLQ9Y2I6 1382 aa29.67■■■□□ 2.34
PCM1-210ENST00000518936 SLAIN2Q9P270 581 aa29.63■■■□□ 2.33
PCM1-210ENST00000518936 CCDC61Q9Y6R9 512 aa29.63■■■□□ 2.33
PCM1-210ENST00000518936 MST1RQ04912 1400 aa29.62■■■□□ 2.33
PCM1-210ENST00000518936 NUDT16Q96DE0 195 aaKnown RBP29.61■■■□□ 2.33
PCM1-210ENST00000518936 C1orf167Q5SNV9 1468 aa29.61■■■□□ 2.33
PCM1-210ENST00000518936 CABP2Q9NPB3 220 aa29.59■■■□□ 2.33
PCM1-210ENST00000518936 DISP3Q9P2K9 1392 aa29.59■■■□□ 2.33
PCM1-210ENST00000518936 ATP7BP35670 1465 aa29.59■■■□□ 2.33
PCM1-210ENST00000518936 KIF1AQ12756 1690 aa29.59■■■□□ 2.33
PCM1-210ENST00000518936 UBAP1LF5GYI3 381 aa29.58■■■□□ 2.33
PCM1-210ENST00000518936 TOPAZ1Q8N9V7 1692 aa29.55■■■□□ 2.32
PCM1-210ENST00000518936 ESCO1Q5FWF5 840 aa29.54■■■□□ 2.32
PCM1-210ENST00000518936 USP32Q8NFA0 1604 aa29.53■■■□□ 2.32
PCM1-210ENST00000518936 PPIP5K1Q6PFW1 1433 aa29.53■■■□□ 2.32
PCM1-210ENST00000518936 NUTM2FA1L443 756 aa29.52■■■□□ 2.32
PCM1-210ENST00000518936 PLEKHG3A1L390 1219 aa29.51■■■□□ 2.31
PCM1-210ENST00000518936 TERF2IPQ9NYB0 399 aa29.51■■■□□ 2.31
PCM1-210ENST00000518936 PHF8Q9UPP1 1060 aa29.51■■■□□ 2.31
PCM1-210ENST00000518936 RGPD8O14715 1765 aaPredicted RBP29.51■■■□□ 2.31
PCM1-210ENST00000518936 TMC1Q8TDI8 760 aa29.5■■■□□ 2.31
PCM1-210ENST00000518936 ZNF692Q9BU19 519 aaPredicted RBP29.5■■■□□ 2.31
PCM1-210ENST00000518936 ZNF316A6NFI3 1004 aaPredicted RBP29.49■■■□□ 2.31
PCM1-210ENST00000518936 POLR3GLQ9BT43 218 aa29.49■■■□□ 2.31
PCM1-210ENST00000518936 CCDC7Q96M83 1385 aa29.49■■■□□ 2.31
PCM1-210ENST00000518936 KIF7Q2M1P5 1343 aa29.48■■■□□ 2.31
PCM1-210ENST00000518936 PRR36Q9H6K5 1346 aa29.48■■■□□ 2.31
PCM1-210ENST00000518936 HDGFL2Q7Z4V5 671 aaPredicted RBP29.48■■■□□ 2.31
PCM1-210ENST00000518936 NGDNQ8NEJ9 315 aaKnown RBP29.48■■■□□ 2.31
PCM1-210ENST00000518936 BRD4O60885 1362 aaPredicted RBP29.48■■■□□ 2.31
PCM1-210ENST00000518936 NPHP3Q7Z494 1330 aa29.47■■■□□ 2.31
PCM1-210ENST00000518936 ROBO1Q9Y6N7 1651 aa29.45■■■□□ 2.31
PCM1-210ENST00000518936 BRINP3Q76B58 766 aa29.45■■■□□ 2.31
PCM1-210ENST00000518936 CABP1Q9NZU7 370 aa29.45■■■□□ 2.31
PCM1-210ENST00000518936 POLR3AO14802 1390 aaPredicted RBP29.44■■■□□ 2.3
PCM1-210ENST00000518936 SCAF1Q9H7N4 1312 aaKnown RBP29.44■■■□□ 2.3
PCM1-210ENST00000518936 PSME1Q06323 249 aa29.43■■■□□ 2.3
PCM1-210ENST00000518936 ORAI2Q96SN7 254 aa29.43■■■□□ 2.3
PCM1-210ENST00000518936 WASHC2AQ641Q2 1341 aa29.43■■■□□ 2.3
PCM1-210ENST00000518936 ANKRD36BQ8N2N9 1353 aa29.41■■■□□ 2.3
PCM1-210ENST00000518936 PIP4K2BP78356 416 aa29.41■■■□□ 2.3
PCM1-210ENST00000518936 C11orf95C9JLR9 678 aaPredicted RBP29.4■■■□□ 2.3
PCM1-210ENST00000518936 PMFBP1Q8TBY8 1022 aa29.4■■■□□ 2.3
PCM1-210ENST00000518936 MYOM1P52179 1685 aa29.4■■■□□ 2.3
PCM1-210ENST00000518936 ACEP12821 1306 aa29.4■■■□□ 2.3
PCM1-210ENST00000518936 SLC12A5Q9H2X9 1139 aa29.38■■■□□ 2.29
PCM1-210ENST00000518936 NHSL1Q5SYE7 1610 aa29.38■■■□□ 2.29
PCM1-210ENST00000518936 AKAP12Q02952 1782 aa29.37■■■□□ 2.29
PCM1-210ENST00000518936 AHDC1Q5TGY3 1603 aaPredicted RBP29.37■■■□□ 2.29
PCM1-210ENST00000518936 KTN1Q86UP2 1357 aaKnown RBP29.36■■■□□ 2.29
PCM1-210ENST00000518936 CPSF1Q10570 1443 aaKnown RBP29.36■■■□□ 2.29
PCM1-210ENST00000518936 FOXO3O43524 673 aa29.35■■■□□ 2.29
PCM1-210ENST00000518936 MON2Q7Z3U7 1717 aa29.33■■■□□ 2.29
PCM1-210ENST00000518936 USP6P35125 1406 aa29.32■■■□□ 2.28
PCM1-210ENST00000518936 EDC4Q6P2E9 1401 aaKnown RBP29.32■■■□□ 2.28
PCM1-210ENST00000518936 A0A1W2PP64 1363 aa29.31■■■□□ 2.28
PCM1-210ENST00000518936 TTC21AQ8NDW8 1320 aa29.31■■■□□ 2.28
PCM1-210ENST00000518936 KRT28Q7Z3Y7 464 aa29.31■■■□□ 2.28
PCM1-210ENST00000518936 SBNO1A3KN83 1393 aa29.3■■■□□ 2.28
PCM1-210ENST00000518936 PHLPP1O60346 1717 aa29.29■■■□□ 2.28
PCM1-210ENST00000518936 SOS2Q07890 1332 aaPredicted RBP29.28■■■□□ 2.28
PCM1-210ENST00000518936 LRRC59Q96AG4 307 aaKnown RBP29.28■■■□□ 2.28
PCM1-210ENST00000518936 CD163L1Q9NR16 1453 aa29.28■■■□□ 2.28
PCM1-210ENST00000518936 PXDNQ92626 1479 aa29.26■■■□□ 2.27
PCM1-210ENST00000518936 PANK3Q9H999 370 aa29.26■■■□□ 2.27
PCM1-210ENST00000518936 KNSTRNQ9Y448 316 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms