RNA–Protein interactions for RNA: ENST00000517251.1

SCARNA20.6-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 106 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.6-201ENST00000517251 CAMTA1Q9Y6Y1 1673 aa4.42□□□□□ -1.7
SCARNA20.6-201ENST00000517251 TECPR2O15040 1411 aa4.42□□□□□ -1.7
SCARNA20.6-201ENST00000517251 DIP2AQ14689 1571 aa4.42□□□□□ -1.7
SCARNA20.6-201ENST00000517251 RGL3Q3MIN7 710 aa4.42□□□□□ -1.7
SCARNA20.6-201ENST00000517251 STAC3Q96MF2 364 aa4.42□□□□□ -1.7
SCARNA20.6-201ENST00000517251 PPP4R2Q9NY27 417 aa4.42□□□□□ -1.7
SCARNA20.6-201ENST00000517251 RBM19Q9Y4C8 960 aaKnown RBP4.42□□□□□ -1.7
SCARNA20.6-201ENST00000517251 NKTRP30414 1462 aaKnown RBP4.42□□□□□ -1.7
SCARNA20.6-201ENST00000517251 CHD2O14647 1828 aaKnown RBP4.42□□□□□ -1.7
SCARNA20.6-201ENST00000517251 POLR3AO14802 1390 aaPredicted RBP4.41□□□□□ -1.7
SCARNA20.6-201ENST00000517251 ABCC11Q96J66 1382 aa4.41□□□□□ -1.7
SCARNA20.6-201ENST00000517251 YTHDC2Q9H6S0 1430 aaKnown RBP4.41□□□□□ -1.7
SCARNA20.6-201ENST00000517251 RGPD2P0DJD1 1756 aa4.41□□□□□ -1.7
SCARNA20.6-201ENST00000517251 KIF3BO15066 747 aa4.41□□□□□ -1.7
SCARNA20.6-201ENST00000517251 RRP1P56182 461 aaKnown RBP4.41□□□□□ -1.7
SCARNA20.6-201ENST00000517251 TMF1P82094 1093 aa4.41□□□□□ -1.7
SCARNA20.6-201ENST00000517251 NSD2O96028 1365 aa4.4□□□□□ -1.7
SCARNA20.6-201ENST00000517251 ANKRD36BQ8N2N9 1353 aa4.4□□□□□ -1.7
SCARNA20.6-201ENST00000517251 SIPA1L3O60292 1781 aaPredicted RBP4.4□□□□□ -1.7
SCARNA20.6-201ENST00000517251 PPP2R1AP30153 589 aa4.4□□□□□ -1.71
SCARNA20.6-201ENST00000517251 CFAP70Q5T0N1 1121 aa4.4□□□□□ -1.71
SCARNA20.6-201ENST00000517251 B4GALNT3Q6L9W6 998 aa4.4□□□□□ -1.71
SCARNA20.6-201ENST00000517251 PANK3Q9H999 370 aa4.4□□□□□ -1.71
SCARNA20.6-201ENST00000517251 CDK12Q9NYV4 1490 aaPredicted RBP4.4□□□□□ -1.71
SCARNA20.6-201ENST00000517251 SLIT1O75093 1534 aa4.4□□□□□ -1.71
SCARNA20.6-201ENST00000517251 A0A1W2PP64 1363 aa4.4□□□□□ -1.71
SCARNA20.6-201ENST00000517251 NINLQ9Y2I6 1382 aa4.4□□□□□ -1.71
SCARNA20.6-201ENST00000517251 ARHGAP23Q9P227 1491 aa4.39□□□□□ -1.71
SCARNA20.6-201ENST00000517251 CARD14Q9BXL6 1004 aa4.39□□□□□ -1.71
SCARNA20.6-201ENST00000517251 KDM3BQ7LBC6 1761 aa4.39□□□□□ -1.71
SCARNA20.6-201ENST00000517251 KDM2BQ8NHM5 1336 aa4.39□□□□□ -1.71
SCARNA20.6-201ENST00000517251 CENPJQ9HC77 1338 aaPredicted RBP4.39□□□□□ -1.71
SCARNA20.6-201ENST00000517251 AK9Q5TCS8 1911 aa4.38□□□□□ -1.71
SCARNA20.6-201ENST00000517251 ADAMTSL3P82987 1691 aa4.38□□□□□ -1.71
SCARNA20.6-201ENST00000517251 TRPM3Q9HCF6 1732 aaPredicted RBP4.38□□□□□ -1.71
SCARNA20.6-201ENST00000517251 SENP3-EIF4A1A0A087X0R7 540 aa4.38□□□□□ -1.71
SCARNA20.6-201ENST00000517251 CC2D1BQ5T0F9 858 aaKnown RBP4.38□□□□□ -1.71
SCARNA20.6-201ENST00000517251 DUSP27Q5VZP5 1158 aa4.38□□□□□ -1.71
SCARNA20.6-201ENST00000517251 TRMT2AQ8IZ69 625 aaKnown RBP4.38□□□□□ -1.71
SCARNA20.6-201ENST00000517251 TMC1Q8TDI8 760 aa4.38□□□□□ -1.71
SCARNA20.6-201ENST00000517251 CDCA7LQ96GN5 454 aa4.38□□□□□ -1.71
SCARNA20.6-201ENST00000517251 POLR3GLQ9BT43 218 aa4.38□□□□□ -1.71
SCARNA20.6-201ENST00000517251 ANP32EQ9BTT0 268 aa4.38□□□□□ -1.71
SCARNA20.6-201ENST00000517251 PHF23Q9BUL5 403 aaPredicted RBP4.38□□□□□ -1.71
SCARNA20.6-201ENST00000517251 C14orf93Q9H972 538 aaKnown RBP4.38□□□□□ -1.71
SCARNA20.6-201ENST00000517251 RPGRIP1LQ68CZ1 1315 aa4.38□□□□□ -1.71
SCARNA20.6-201ENST00000517251 LMO7Q8WWI1 1683 aa4.38□□□□□ -1.71
SCARNA20.6-201ENST00000517251 FAM135BQ49AJ0 1406 aa4.38□□□□□ -1.71
SCARNA20.6-201ENST00000517251 NWD1Q149M9 1564 aa4.37□□□□□ -1.71
SCARNA20.6-201ENST00000517251 MED1Q15648 1581 aaPredicted RBP4.37□□□□□ -1.71
SCARNA20.6-201ENST00000517251 CEP170BQ9Y4F5 1589 aaPredicted RBP4.37□□□□□ -1.71
SCARNA20.6-201ENST00000517251 PDE3BQ13370 1112 aa4.37□□□□□ -1.71
SCARNA20.6-201ENST00000517251 OSCARQ8IYS5 282 aa4.37□□□□□ -1.71
SCARNA20.6-201ENST00000517251 DMRT2Q9Y5R5 561 aa4.37□□□□□ -1.71
SCARNA20.6-201ENST00000517251 ADAMTS7Q9UKP4 1686 aa4.37□□□□□ -1.71
SCARNA20.6-201ENST00000517251 RGPD5Q99666 1765 aa4.37□□□□□ -1.71
SCARNA20.6-201ENST00000517251 CPSF1Q10570 1443 aaKnown RBP4.37□□□□□ -1.71
SCARNA20.6-201ENST00000517251 ADAMTS13Q76LX8 1427 aa4.37□□□□□ -1.71
SCARNA20.6-201ENST00000517251 RIMS2Q9UQ26 1411 aa4.37□□□□□ -1.71
SCARNA20.6-201ENST00000517251 ABCA3Q99758 1704 aa4.36□□□□□ -1.71
SCARNA20.6-201ENST00000517251 RAPGEF3O95398 923 aa4.36□□□□□ -1.71
SCARNA20.6-201ENST00000517251 EXOC6Q8TAG9 804 aa4.36□□□□□ -1.71
SCARNA20.6-201ENST00000517251 RCAN3Q9UKA8 241 aa4.36□□□□□ -1.71
SCARNA20.6-201ENST00000517251 XIRP1Q702N8 1843 aaKnown RBP4.36□□□□□ -1.71
SCARNA20.6-201ENST00000517251 PNPLA6Q8IY17 1366 aa4.36□□□□□ -1.71
SCARNA20.6-201ENST00000517251 OVOS2A0A0J9YW53 1432 aa4.36□□□□□ -1.71
SCARNA20.6-201ENST00000517251 OVOS2Q6IE36 1432 aa4.36□□□□□ -1.71
SCARNA20.6-201ENST00000517251 PPIP5K1Q6PFW1 1433 aa4.36□□□□□ -1.71
SCARNA20.6-201ENST00000517251 STRCP1A6NGW2 1772 aa4.35□□□□□ -1.71
SCARNA20.6-201ENST00000517251 CDCA8Q53HL2 280 aa4.35□□□□□ -1.71
SCARNA20.6-201ENST00000517251 C20orf194Q5TEA3 1177 aa4.35□□□□□ -1.71
SCARNA20.6-201ENST00000517251 PUS7Q96PZ0 661 aaKnown RBP4.35□□□□□ -1.71
SCARNA20.6-201ENST00000517251 SPINK5Q9NQ38 1064 aaPredicted RBP4.35□□□□□ -1.71
SCARNA20.6-201ENST00000517251 ADAMTS8Q9UP79 889 aa4.35□□□□□ -1.71
SCARNA20.6-201ENST00000517251 ATAD2Q6PL18 1390 aa4.35□□□□□ -1.71
SCARNA20.6-201ENST00000517251 PTCH1Q13635 1447 aa4.35□□□□□ -1.71
SCARNA20.6-201ENST00000517251 GLI3P10071 1580 aa4.35□□□□□ -1.71
SCARNA20.6-201ENST00000517251 ALS2Q96Q42 1657 aa4.35□□□□□ -1.71
SCARNA20.6-201ENST00000517251 SLFN5Q08AF3 891 aa4.34□□□□□ -1.71
SCARNA20.6-201ENST00000517251 CNGB1Q14028 1251 aaPredicted RBP4.34□□□□□ -1.71
SCARNA20.6-201ENST00000517251 ZMYM3Q14202 1370 aa4.34□□□□□ -1.71
SCARNA20.6-201ENST00000517251 EDC4Q6P2E9 1401 aaKnown RBP4.34□□□□□ -1.71
SCARNA20.6-201ENST00000517251 C5P01031 1676 aa4.34□□□□□ -1.71
SCARNA20.6-201ENST00000517251 PARP4Q9UKK3 1724 aaKnown RBP4.34□□□□□ -1.71
SCARNA20.6-201ENST00000517251 LAMB4A4D0S4 1761 aa4.33□□□□□ -1.72
SCARNA20.6-201ENST00000517251 SHANK3Q9BYB0 1731 aa4.33□□□□□ -1.72
SCARNA20.6-201ENST00000517251 NFAT5O94916 1531 aa4.33□□□□□ -1.72
SCARNA20.6-201ENST00000517251 SSH2Q76I76 1423 aa4.33□□□□□ -1.72
SCARNA20.6-201ENST00000517251 PTPRUQ92729 1446 aa4.33□□□□□ -1.72
SCARNA20.6-201ENST00000517251 MYT1Q01538 1121 aa4.33□□□□□ -1.72
SCARNA20.6-201ENST00000517251 IDI1Q13907 227 aa4.33□□□□□ -1.72
SCARNA20.6-201ENST00000517251 CRBNQ96SW2 442 aa4.33□□□□□ -1.72
SCARNA20.6-201ENST00000517251 KNSTRNQ9Y448 316 aa4.33□□□□□ -1.72
SCARNA20.6-201ENST00000517251 WNK3Q9BYP7 1800 aa4.32□□□□□ -1.72
SCARNA20.6-201ENST00000517251 SCN11AQ9UI33 1791 aa4.32□□□□□ -1.72
SCARNA20.6-201ENST00000517251 PKD1L3Q7Z443 1732 aa4.32□□□□□ -1.72
SCARNA20.6-201ENST00000517251 KIF1AQ12756 1690 aa4.32□□□□□ -1.72
SCARNA20.6-201ENST00000517251 METP08581 1390 aa4.32□□□□□ -1.72
SCARNA20.6-201ENST00000517251 PLIN1O60240 522 aa4.32□□□□□ -1.72
SCARNA20.6-201ENST00000517251 TMEM132EQ6IEE7 984 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms