RNA–Protein interactions for RNA: ENST00000516911.1

RNU6-1258P-201, Transcript of RNA, U6 small nuclear 1258, pseudogene, humanhuman

BASIC

Gene RNU6-1258P, Length 111 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1258P-201ENST00000516911 IRF7Q92985 503 aa3.54□□□□□ -1.84
RNU6-1258P-201ENST00000516911 SLC27A5Q9Y2P5 690 aa3.54□□□□□ -1.84
RNU6-1258P-201ENST00000516911 J3QL48 77 aa3.53□□□□□ -1.84
RNU6-1258P-201ENST00000516911 SMPD1P17405 629 aa3.53□□□□□ -1.84
RNU6-1258P-201ENST00000516911 TRIM32Q13049 653 aa3.53□□□□□ -1.84
RNU6-1258P-201ENST00000516911 METTL3Q86U44 580 aaKnown RBP3.53□□□□□ -1.84
RNU6-1258P-201ENST00000516911 MRGPRX2Q96LB1 330 aa3.53□□□□□ -1.84
RNU6-1258P-201ENST00000516911 NXF1Q9UBU9 619 aaKnown RBP3.53□□□□□ -1.84
RNU6-1258P-201ENST00000516911 SALL2Q9Y467 1007 aaPredicted RBP3.53□□□□□ -1.84
RNU6-1258P-201ENST00000516911 WASF2Q9Y6W5 498 aa3.53□□□□□ -1.84
RNU6-1258P-201ENST00000516911 ALDH1A1P00352 501 aa3.52□□□□□ -1.85
RNU6-1258P-201ENST00000516911 GCGRP47871 477 aa3.52□□□□□ -1.85
RNU6-1258P-201ENST00000516911 MSS51Q4VC12 460 aa3.52□□□□□ -1.85
RNU6-1258P-201ENST00000516911 BRICD5Q6PL45 260 aa3.52□□□□□ -1.85
RNU6-1258P-201ENST00000516911 FAM160A2Q8N612 972 aaPredicted RBP3.52□□□□□ -1.85
RNU6-1258P-201ENST00000516911 THAP11Q96EK4 314 aa3.52□□□□□ -1.85
RNU6-1258P-201ENST00000516911 GNPATO15228 680 aa3.51□□□□□ -1.85
RNU6-1258P-201ENST00000516911 RC3H1Q5TC82 1133 aaKnown RBP3.51□□□□□ -1.85
RNU6-1258P-201ENST00000516911 NPAS3Q8IXF0 933 aa3.51□□□□□ -1.85
RNU6-1258P-201ENST00000516911 HPS1Q92902 700 aa3.51□□□□□ -1.85
RNU6-1258P-201ENST00000516911 PRDM9Q9NQV7 894 aa3.51□□□□□ -1.85
RNU6-1258P-201ENST00000516911 CAPN5O15484 640 aaPredicted RBP3.5□□□□□ -1.85
RNU6-1258P-201ENST00000516911 KCNV2Q8TDN2 545 aa3.5□□□□□ -1.85
RNU6-1258P-201ENST00000516911 USB1Q9BQ65 265 aaKnown RBP3.5□□□□□ -1.85
RNU6-1258P-201ENST00000516911 GMPRP36959 345 aa3.49□□□□□ -1.85
RNU6-1258P-201ENST00000516911 WNT7BP56706 349 aa3.49□□□□□ -1.85
RNU6-1258P-201ENST00000516911 SCARF1Q14162 830 aa3.49□□□□□ -1.85
RNU6-1258P-201ENST00000516911 RNF19BQ6ZMZ0 732 aa3.49□□□□□ -1.85
RNU6-1258P-201ENST00000516911 EHBP1Q8NDI1 1231 aa3.49□□□□□ -1.85
RNU6-1258P-201ENST00000516911 SEMA3EO15041 775 aa3.48□□□□□ -1.85
RNU6-1258P-201ENST00000516911 VEGFBP49765 207 aa3.48□□□□□ -1.85
RNU6-1258P-201ENST00000516911 MMP16P51512 607 aa3.48□□□□□ -1.85
RNU6-1258P-201ENST00000516911 PLEKHG3A1L390 1219 aa3.47□□□□□ -1.85
RNU6-1258P-201ENST00000516911 KDM4AO75164 1064 aa3.47□□□□□ -1.85
RNU6-1258P-201ENST00000516911 USP46P62068 366 aa3.47□□□□□ -1.85
RNU6-1258P-201ENST00000516911 AMER1Q5JTC6 1135 aaPredicted RBP3.47□□□□□ -1.85
RNU6-1258P-201ENST00000516911 KRI1Q8N9T8 703 aaKnown RBP3.47□□□□□ -1.85
RNU6-1258P-201ENST00000516911 RBM26Q5T8P6 1007 aaKnown RBP3.46□□□□□ -1.86
RNU6-1258P-201ENST00000516911 NUTM1Q86Y26 1132 aa3.46□□□□□ -1.86
RNU6-1258P-201ENST00000516911 NLRP7Q8WX94 980 aa3.46□□□□□ -1.86
RNU6-1258P-201ENST00000516911 TSHZ2Q9NRE2 1034 aa3.46□□□□□ -1.86
RNU6-1258P-201ENST00000516911 H3BM21 787 aa3.45□□□□□ -1.86
RNU6-1258P-201ENST00000516911 TULP1O00294 542 aaPredicted RBP3.45□□□□□ -1.86
RNU6-1258P-201ENST00000516911 DXOO77932 396 aaKnown RBP3.45□□□□□ -1.86
RNU6-1258P-201ENST00000516911 UPP2O95045 317 aa3.45□□□□□ -1.86
RNU6-1258P-201ENST00000516911 BMP1P13497 986 aa3.45□□□□□ -1.86
RNU6-1258P-201ENST00000516911 ZFP42Q96MM3 310 aa3.45□□□□□ -1.86
RNU6-1258P-201ENST00000516911 NUDT12Q9BQG2 462 aa3.45□□□□□ -1.86
RNU6-1258P-201ENST00000516911 RNF225M0QZC1 329 aaPredicted RBP3.44□□□□□ -1.86
RNU6-1258P-201ENST00000516911 JUNDP17535 347 aa3.44□□□□□ -1.86
RNU6-1258P-201ENST00000516911 SKOR1P84550 965 aa3.44□□□□□ -1.86
RNU6-1258P-201ENST00000516911 SUZ12Q15022 739 aaKnown RBP3.44□□□□□ -1.86
RNU6-1258P-201ENST00000516911 TMEM151AQ8N4L1 468 aa3.44□□□□□ -1.86
RNU6-1258P-201ENST00000516911 C6orf229H3BNL8 230 aa3.43□□□□□ -1.86
RNU6-1258P-201ENST00000516911 MAN1A2O60476 641 aa3.43□□□□□ -1.86
RNU6-1258P-201ENST00000516911 CD46P15529 392 aa3.43□□□□□ -1.86
RNU6-1258P-201ENST00000516911 TRIM46Q7Z4K8 759 aa3.43□□□□□ -1.86
RNU6-1258P-201ENST00000516911 GPIHBP1Q8IV16 184 aa3.43□□□□□ -1.86
RNU6-1258P-201ENST00000516911 GDF11O95390 407 aa3.42□□□□□ -1.86
RNU6-1258P-201ENST00000516911 MS4A1P11836 297 aa3.42□□□□□ -1.86
RNU6-1258P-201ENST00000516911 WDR4P57081 412 aaKnown RBP3.42□□□□□ -1.86
RNU6-1258P-201ENST00000516911 LCE2CQ5TA81 110 aa3.42□□□□□ -1.86
RNU6-1258P-201ENST00000516911 MRPL14Q6P1L8 145 aaKnown RBP3.42□□□□□ -1.86
RNU6-1258P-201ENST00000516911 RETREG3Q86VR2 466 aa3.42□□□□□ -1.86
RNU6-1258P-201ENST00000516911 KCTD17Q8N5Z5 321 aa3.42□□□□□ -1.86
RNU6-1258P-201ENST00000516911 PURBQ96QR8 312 aaKnown RBP3.42□□□□□ -1.86
RNU6-1258P-201ENST00000516911 LOC100996750A0A140TA64 210 aa3.41□□□□□ -1.86
RNU6-1258P-201ENST00000516911 TESPA1A2RU30 521 aaPredicted RBP3.41□□□□□ -1.86
RNU6-1258P-201ENST00000516911 SIAH2O43255 324 aa3.41□□□□□ -1.86
RNU6-1258P-201ENST00000516911 VARSP26640 1264 aaKnown RBP3.41□□□□□ -1.86
RNU6-1258P-201ENST00000516911 MDM2Q00987 491 aaPredicted RBP3.41□□□□□ -1.86
RNU6-1258P-201ENST00000516911 KCNMA1Q12791 1236 aa3.41□□□□□ -1.86
RNU6-1258P-201ENST00000516911 NNTQ13423 1086 aa3.41□□□□□ -1.86
RNU6-1258P-201ENST00000516911 ARID5BQ14865 1188 aa3.41□□□□□ -1.86
RNU6-1258P-201ENST00000516911 KRTAP4-6Q9BYQ5 205 aa3.41□□□□□ -1.86
RNU6-1258P-201ENST00000516911 ERBB4Q15303 1308 aa3.41□□□□□ -1.86
RNU6-1258P-201ENST00000516911 HOXA2O43364 376 aa3.4□□□□□ -1.87
RNU6-1258P-201ENST00000516911 ADH1CP00326 375 aa3.4□□□□□ -1.87
RNU6-1258P-201ENST00000516911 CCNYL3P0C7X3 344 aa3.4□□□□□ -1.87
RNU6-1258P-201ENST00000516911 BMP2P12643 396 aa3.4□□□□□ -1.87
RNU6-1258P-201ENST00000516911 CTHP32929 405 aa3.4□□□□□ -1.87
RNU6-1258P-201ENST00000516911 SH3BP2P78314 561 aa3.4□□□□□ -1.87
RNU6-1258P-201ENST00000516911 AGERQ15109 404 aa3.4□□□□□ -1.87
RNU6-1258P-201ENST00000516911 LINC01559Q495D7 138 aa3.4□□□□□ -1.87
RNU6-1258P-201ENST00000516911 C6orf118Q5T5N4 469 aa3.4□□□□□ -1.87
RNU6-1258P-201ENST00000516911 FAM174AQ8TBP5 190 aa3.4□□□□□ -1.87
RNU6-1258P-201ENST00000516911 BAP1Q92560 729 aa3.4□□□□□ -1.87
RNU6-1258P-201ENST00000516911 SYMPKQ92797 1274 aaKnown RBP3.4□□□□□ -1.87
RNU6-1258P-201ENST00000516911 FDX1P10109 184 aa3.39□□□□□ -1.87
RNU6-1258P-201ENST00000516911 MARSP56192 900 aaKnown RBP3.39□□□□□ -1.87
RNU6-1258P-201ENST00000516911 PTCRAQ6ISU1 281 aaPredicted RBP3.39□□□□□ -1.87
RNU6-1258P-201ENST00000516911 PHOX2BQ99453 314 aa3.39□□□□□ -1.87
RNU6-1258P-201ENST00000516911 UNC93B1Q9H1C4 597 aa3.39□□□□□ -1.87
RNU6-1258P-201ENST00000516911 SOBPA7XYQ1 873 aa3.38□□□□□ -1.87
RNU6-1258P-201ENST00000516911 SPTLC1O15269 473 aa3.38□□□□□ -1.87
RNU6-1258P-201ENST00000516911 LORP23490 312 aaPredicted RBP3.38□□□□□ -1.87
RNU6-1258P-201ENST00000516911 CLCN1P35523 988 aa3.38□□□□□ -1.87
RNU6-1258P-201ENST00000516911 GUCA2AQ02747 115 aa3.38□□□□□ -1.87
RNU6-1258P-201ENST00000516911 RASSF7Q02833 373 aa3.38□□□□□ -1.87
RNU6-1258P-201ENST00000516911 KCNH2Q12809 1159 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms