RNA–Protein interactions for RNA: ENST00000516546.1

RN7SKP287-201, Transcript of RNA, 7SK small nuclear pseudogene 287, humanhuman

BASIC

Gene RN7SKP287, Length 266 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP287-201ENST00000516546 EMID1Q96A84 441 aaPredicted RBP11.37□□□□□ -0.59
RN7SKP287-201ENST00000516546 SYMPKQ92797 1274 aaKnown RBP11.36□□□□□ -0.59
RN7SKP287-201ENST00000516546 SLC19A1P41440 591 aa11.35□□□□□ -0.59
RN7SKP287-201ENST00000516546 PLA2G2CQ5R387 149 aa11.35□□□□□ -0.59
RN7SKP287-201ENST00000516546 IRX2Q9BZI1 471 aaPredicted RBP11.34□□□□□ -0.59
RN7SKP287-201ENST00000516546 GPBP1L1Q9HC44 474 aaPredicted RBP11.34□□□□□ -0.59
RN7SKP287-201ENST00000516546 FCF1Q9Y324 198 aaKnown RBP11.34□□□□□ -0.59
RN7SKP287-201ENST00000516546 C6orf229H3BNL8 230 aa11.33□□□□□ -0.6
RN7SKP287-201ENST00000516546 GJA5P36382 358 aa11.33□□□□□ -0.6
RN7SKP287-201ENST00000516546 MMP16P51512 607 aa11.33□□□□□ -0.6
RN7SKP287-201ENST00000516546 RSBN1LQ6PCB5 846 aaPredicted RBP11.33□□□□□ -0.6
RN7SKP287-201ENST00000516546 KDM4CQ9H3R0 1056 aa11.33□□□□□ -0.6
RN7SKP287-201ENST00000516546 TPRNQ4KMQ1 711 aa11.32□□□□□ -0.6
RN7SKP287-201ENST00000516546 LIAT1Q6ZQX7 453 aa11.32□□□□□ -0.6
RN7SKP287-201ENST00000516546 RETREG3Q86VR2 466 aa11.32□□□□□ -0.6
RN7SKP287-201ENST00000516546 DXOO77932 396 aaKnown RBP11.31□□□□□ -0.6
RN7SKP287-201ENST00000516546 SPTLC1O15269 473 aa11.3□□□□□ -0.6
RN7SKP287-201ENST00000516546 SPRYD7Q5W111 196 aa11.3□□□□□ -0.6
RN7SKP287-201ENST00000516546 MYSM1Q5VVJ2 828 aa11.29□□□□□ -0.6
RN7SKP287-201ENST00000516546 RIC3Q7Z5B4 369 aa11.29□□□□□ -0.6
RN7SKP287-201ENST00000516546 JUNDP17535 347 aa11.28□□□□□ -0.6
RN7SKP287-201ENST00000516546 MTMR2Q13614 643 aa11.28□□□□□ -0.6
RN7SKP287-201ENST00000516546 PCDHB15Q9Y5E8 787 aa11.28□□□□□ -0.6
RN7SKP287-201ENST00000516546 SPDYE5A6NIY4 337 aa11.26□□□□□ -0.61
RN7SKP287-201ENST00000516546 ZNF598Q86UK7 904 aaKnown RBP11.26□□□□□ -0.61
RN7SKP287-201ENST00000516546 FAM117AQ9C073 453 aa11.26□□□□□ -0.61
RN7SKP287-201ENST00000516546 RPIAP49247 311 aa11.25□□□□□ -0.61
RN7SKP287-201ENST00000516546 RSPH6AQ9H0K4 717 aa11.25□□□□□ -0.61
RN7SKP287-201ENST00000516546 LIMD1Q9UGP4 676 aa11.25□□□□□ -0.61
RN7SKP287-201ENST00000516546 ZNF697Q5TEC3 545 aa11.24□□□□□ -0.61
RN7SKP287-201ENST00000516546 PRR7Q8TB68 274 aa11.24□□□□□ -0.61
RN7SKP287-201ENST00000516546 DDRGK1Q96HY6 314 aa11.24□□□□□ -0.61
RN7SKP287-201ENST00000516546 GFRA3O60609 400 aa11.23□□□□□ -0.61
RN7SKP287-201ENST00000516546 CSPP1Q1MSJ5 1256 aa11.23□□□□□ -0.61
RN7SKP287-201ENST00000516546 PRPF38BQ5VTL8 546 aaKnown RBP11.23□□□□□ -0.61
RN7SKP287-201ENST00000516546 ZBTB3Q9H5J0 574 aa11.23□□□□□ -0.61
RN7SKP287-201ENST00000516546 ZBTB24O43167 697 aaPredicted RBP11.22□□□□□ -0.61
RN7SKP287-201ENST00000516546 HRCP23327 699 aa11.22□□□□□ -0.61
RN7SKP287-201ENST00000516546 CLK2P49760 499 aaKnown RBP11.22□□□□□ -0.61
RN7SKP287-201ENST00000516546 TUSC1Q2TAM9 212 aa11.22□□□□□ -0.61
RN7SKP287-201ENST00000516546 PDZRN3Q9UPQ7 1066 aa11.22□□□□□ -0.61
RN7SKP287-201ENST00000516546 CD2BP2O95400 341 aaKnown RBP11.21□□□□□ -0.61
RN7SKP287-201ENST00000516546 LAPTM4AQ15012 233 aa11.21□□□□□ -0.61
RN7SKP287-201ENST00000516546 NEUROD2Q15784 382 aa11.21□□□□□ -0.61
RN7SKP287-201ENST00000516546 TRIM67Q6ZTA4 783 aa11.21□□□□□ -0.61
RN7SKP287-201ENST00000516546 CCDC24Q8N4L8 307 aa11.21□□□□□ -0.61
RN7SKP287-201ENST00000516546 CABLES1Q8TDN4 633 aa11.21□□□□□ -0.61
RN7SKP287-201ENST00000516546 POLR3EQ9NVU0 708 aa11.21□□□□□ -0.61
RN7SKP287-201ENST00000516546 PLEKHG3A1L390 1219 aa11.2□□□□□ -0.62
RN7SKP287-201ENST00000516546 DESI1Q6ICB0 168 aa11.2□□□□□ -0.62
RN7SKP287-201ENST00000516546 NUDT12Q9BQG2 462 aa11.2□□□□□ -0.62
RN7SKP287-201ENST00000516546 CFAP99D6REC4 459 aa11.19□□□□□ -0.62
RN7SKP287-201ENST00000516546 QPCTQ16769 361 aa11.19□□□□□ -0.62
RN7SKP287-201ENST00000516546 NRG2O14511 850 aaPredicted RBP11.18□□□□□ -0.62
RN7SKP287-201ENST00000516546 LILRB3O75022 631 aa11.18□□□□□ -0.62
RN7SKP287-201ENST00000516546 TRIM32Q13049 653 aa11.18□□□□□ -0.62
RN7SKP287-201ENST00000516546 PTPRNQ16849 979 aa11.18□□□□□ -0.62
RN7SKP287-201ENST00000516546 CCNYL3P0C7X3 344 aa11.17□□□□□ -0.62
RN7SKP287-201ENST00000516546 BRPF1P55201 1214 aaPredicted RBP11.17□□□□□ -0.62
RN7SKP287-201ENST00000516546 SH3D19Q5HYK7 790 aa11.17□□□□□ -0.62
RN7SKP287-201ENST00000516546 NUTM2BA6NNL0 878 aaPredicted RBP11.16□□□□□ -0.62
RN7SKP287-201ENST00000516546 NUTM2EB1AL46 878 aaPredicted RBP11.16□□□□□ -0.62
RN7SKP287-201ENST00000516546 GDF9O60383 454 aa11.16□□□□□ -0.62
RN7SKP287-201ENST00000516546 PRR20EP86478 221 aa11.16□□□□□ -0.62
RN7SKP287-201ENST00000516546 PRR20CP86479 221 aa11.16□□□□□ -0.62
RN7SKP287-201ENST00000516546 PRR20DP86480 221 aa11.16□□□□□ -0.62
RN7SKP287-201ENST00000516546 PRR20BP86481 221 aa11.16□□□□□ -0.62
RN7SKP287-201ENST00000516546 PRR20AP86496 221 aa11.16□□□□□ -0.62
RN7SKP287-201ENST00000516546 SKIV2LQ15477 1246 aaKnown RBP11.16□□□□□ -0.62
RN7SKP287-201ENST00000516546 NUTM2DQ5VT03 806 aaPredicted RBP11.16□□□□□ -0.62
RN7SKP287-201ENST00000516546 NUTM2AQ8IVF1 878 aaPredicted RBP11.16□□□□□ -0.62
RN7SKP287-201ENST00000516546 PKD2L1Q9P0L9 805 aa11.15□□□□□ -0.62
RN7SKP287-201ENST00000516546 TNFRSF10AO00220 468 aa11.14□□□□□ -0.63
RN7SKP287-201ENST00000516546 FOXC1Q12948 553 aa11.14□□□□□ -0.63
RN7SKP287-201ENST00000516546 PTCRAQ6ISU1 281 aaPredicted RBP11.14□□□□□ -0.63
RN7SKP287-201ENST00000516546 Q6ZNB5 142 aa11.14□□□□□ -0.63
RN7SKP287-201ENST00000516546 RTL5Q5HYW3 569 aaPredicted RBP11.13□□□□□ -0.63
RN7SKP287-201ENST00000516546 LYPD8Q6UX82 237 aa11.13□□□□□ -0.63
RN7SKP287-201ENST00000516546 EVA1BQ9NVM1 165 aa11.13□□□□□ -0.63
RN7SKP287-201ENST00000516546 PRKCSHP14314 528 aaPredicted RBP11.11□□□□□ -0.63
RN7SKP287-201ENST00000516546 PROCA1Q8NCQ7 364 aaPredicted RBP11.11□□□□□ -0.63
RN7SKP287-201ENST00000516546 TSC1Q92574 1164 aa11.11□□□□□ -0.63
RN7SKP287-201ENST00000516546 KCNH2Q12809 1159 aa11.1□□□□□ -0.63
RN7SKP287-201ENST00000516546 IL27Q8NEV9 243 aa11.1□□□□□ -0.63
RN7SKP287-201ENST00000516546 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.1□□□□□ -0.63
RN7SKP287-201ENST00000516546 WNT7AO00755 349 aa11.08□□□□□ -0.64
RN7SKP287-201ENST00000516546 PER1O15534 1290 aaPredicted RBP11.08□□□□□ -0.64
RN7SKP287-201ENST00000516546 WNT7BP56706 349 aa11.08□□□□□ -0.64
RN7SKP287-201ENST00000516546 HELBQ8NG08 1087 aaPredicted RBP11.08□□□□□ -0.64
RN7SKP287-201ENST00000516546 UNC93B1Q9H1C4 597 aa11.08□□□□□ -0.64
RN7SKP287-201ENST00000516546 ATP1B4Q9UN42 357 aaPredicted RBP11.08□□□□□ -0.64
RN7SKP287-201ENST00000516546 SKOR1P84550 965 aa11.07□□□□□ -0.64
RN7SKP287-201ENST00000516546 FBXO31Q5XUX0 539 aaPredicted RBP11.07□□□□□ -0.64
RN7SKP287-201ENST00000516546 F12P00748 615 aaPredicted RBP11.06□□□□□ -0.64
RN7SKP287-201ENST00000516546 CTHP32929 405 aa11.06□□□□□ -0.64
RN7SKP287-201ENST00000516546 GOPCQ9HD26 462 aa11.06□□□□□ -0.64
RN7SKP287-201ENST00000516546 PPP2R2DQ66LE6 453 aa11.05□□□□□ -0.64
RN7SKP287-201ENST00000516546 TOR4AQ9NXH8 423 aa11.05□□□□□ -0.64
RN7SKP287-201ENST00000516546 MAP10Q9P2G4 905 aa11.05□□□□□ -0.64
RN7SKP287-201ENST00000516546 LCE2BO14633 110 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms