RNA–Protein interactions for RNA: ENST00000516424.1

RN7SKP253-201, Transcript of RNA, 7SK small nuclear pseudogene 253, humanhuman

BASIC

Gene RN7SKP253, Length 309 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP253-201ENST00000516424 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.7□□□□□ -0.38
RN7SKP253-201ENST00000516424 POTECB2RU33 542 aa12.69□□□□□ -0.38
RN7SKP253-201ENST00000516424 ST8SIA5O15466 376 aa12.69□□□□□ -0.38
RN7SKP253-201ENST00000516424 MMP16P51512 607 aa12.69□□□□□ -0.38
RN7SKP253-201ENST00000516424 USB1Q9BQ65 265 aaKnown RBP12.69□□□□□ -0.38
RN7SKP253-201ENST00000516424 GPCPD1Q9NPB8 672 aa12.69□□□□□ -0.38
RN7SKP253-201ENST00000516424 ZBTB24O43167 697 aaPredicted RBP12.68□□□□□ -0.38
RN7SKP253-201ENST00000516424 HOXA2O43364 376 aa12.68□□□□□ -0.38
RN7SKP253-201ENST00000516424 USP46P62068 366 aa12.68□□□□□ -0.38
RN7SKP253-201ENST00000516424 FAM217BQ9NTX9 383 aaPredicted RBP12.68□□□□□ -0.38
RN7SKP253-201ENST00000516424 TOR4AQ9NXH8 423 aa12.68□□□□□ -0.38
RN7SKP253-201ENST00000516424 CLCN1P35523 988 aa12.67□□□□□ -0.38
RN7SKP253-201ENST00000516424 GUCA2AQ02747 115 aa12.67□□□□□ -0.38
RN7SKP253-201ENST00000516424 ZNF775Q96BV0 537 aaPredicted RBP12.66□□□□□ -0.38
RN7SKP253-201ENST00000516424 AAASQ9NRG9 546 aa12.66□□□□□ -0.38
RN7SKP253-201ENST00000516424 DXOO77932 396 aaKnown RBP12.65□□□□□ -0.38
RN7SKP253-201ENST00000516424 CYP4X1Q8N118 509 aa12.65□□□□□ -0.38
RN7SKP253-201ENST00000516424 TRIM32Q13049 653 aa12.63□□□□□ -0.39
RN7SKP253-201ENST00000516424 REPIN1Q9BWE0 567 aaKnown RBP12.63□□□□□ -0.39
RN7SKP253-201ENST00000516424 KRI1Q8N9T8 703 aaKnown RBP12.62□□□□□ -0.39
RN7SKP253-201ENST00000516424 SYMPKQ92797 1274 aaKnown RBP12.61□□□□□ -0.39
RN7SKP253-201ENST00000516424 WNT7AO00755 349 aa12.59□□□□□ -0.39
RN7SKP253-201ENST00000516424 AVPP01185 164 aa12.59□□□□□ -0.39
RN7SKP253-201ENST00000516424 NUTM1Q86Y26 1132 aa12.59□□□□□ -0.39
RN7SKP253-201ENST00000516424 CRIPAKQ8N1N5 446 aa12.59□□□□□ -0.39
RN7SKP253-201ENST00000516424 CCDC24Q8N4L8 307 aa12.59□□□□□ -0.39
RN7SKP253-201ENST00000516424 TTC24A2A3L6 582 aaPredicted RBP12.58□□□□□ -0.4
RN7SKP253-201ENST00000516424 DACH1Q9UI36 760 aa12.58□□□□□ -0.4
RN7SKP253-201ENST00000516424 MRGPRX2Q96LB1 330 aa12.56□□□□□ -0.4
RN7SKP253-201ENST00000516424 JUNDP17535 347 aa12.55□□□□□ -0.4
RN7SKP253-201ENST00000516424 BARGINQ6ZT62 677 aa12.55□□□□□ -0.4
RN7SKP253-201ENST00000516424 AXIN1O15169 862 aa12.54□□□□□ -0.4
RN7SKP253-201ENST00000516424 ZMYND10O75800 440 aa12.54□□□□□ -0.4
RN7SKP253-201ENST00000516424 SSTR3P32745 418 aaPredicted RBP12.54□□□□□ -0.4
RN7SKP253-201ENST00000516424 PCDHGC3Q9UN70 934 aa12.54□□□□□ -0.4
RN7SKP253-201ENST00000516424 SMPD1P17405 629 aa12.53□□□□□ -0.4
RN7SKP253-201ENST00000516424 TTLL12Q14166 644 aaPredicted RBP12.53□□□□□ -0.4
RN7SKP253-201ENST00000516424 SNIP1Q8TAD8 396 aaKnown RBP12.53□□□□□ -0.4
RN7SKP253-201ENST00000516424 FDX1P10109 184 aa12.52□□□□□ -0.41
RN7SKP253-201ENST00000516424 CTC1Q2NKJ3 1217 aa12.52□□□□□ -0.41
RN7SKP253-201ENST00000516424 RETREG3Q86VR2 466 aa12.52□□□□□ -0.41
RN7SKP253-201ENST00000516424 ZC3H15Q8WU90 426 aaKnown RBP12.52□□□□□ -0.41
RN7SKP253-201ENST00000516424 SKOR1P84550 965 aa12.51□□□□□ -0.41
RN7SKP253-201ENST00000516424 SPIRE2Q8WWL2 714 aa12.51□□□□□ -0.41
RN7SKP253-201ENST00000516424 J3QL48 77 aa12.5□□□□□ -0.41
RN7SKP253-201ENST00000516424 C6orf229H3BNL8 230 aa12.49□□□□□ -0.41
RN7SKP253-201ENST00000516424 SMCPP49901 116 aaPredicted RBP12.49□□□□□ -0.41
RN7SKP253-201ENST00000516424 AMHR2Q16671 573 aa12.49□□□□□ -0.41
RN7SKP253-201ENST00000516424 RC3H1Q5TC82 1133 aaKnown RBP12.49□□□□□ -0.41
RN7SKP253-201ENST00000516424 NUDT12Q9BQG2 462 aa12.49□□□□□ -0.41
RN7SKP253-201ENST00000516424 GMPR2Q9P2T1 348 aaKnown RBP12.49□□□□□ -0.41
RN7SKP253-201ENST00000516424 NDUFV2P19404 249 aa12.48□□□□□ -0.41
RN7SKP253-201ENST00000516424 MOXD2PA6NHM9 499 aa12.47□□□□□ -0.41
RN7SKP253-201ENST00000516424 WNT7BP56706 349 aa12.47□□□□□ -0.41
RN7SKP253-201ENST00000516424 PTCRAQ6ISU1 281 aaPredicted RBP12.47□□□□□ -0.41
RN7SKP253-201ENST00000516424 GIGYF2Q6Y7W6 1299 aaKnown RBP12.47□□□□□ -0.41
RN7SKP253-201ENST00000516424 HPS1Q92902 700 aa12.44□□□□□ -0.42
RN7SKP253-201ENST00000516424 C11orf95C9JLR9 678 aaPredicted RBP12.43□□□□□ -0.42
RN7SKP253-201ENST00000516424 MS4A1P11836 297 aa12.43□□□□□ -0.42
RN7SKP253-201ENST00000516424 BEGAINQ9BUH8 593 aa12.42□□□□□ -0.42
RN7SKP253-201ENST00000516424 CCNYL3P0C7X3 344 aa12.41□□□□□ -0.42
RN7SKP253-201ENST00000516424 PARP9Q8IXQ6 854 aa12.4□□□□□ -0.42
RN7SKP253-201ENST00000516424 ATP13A2Q9NQ11 1180 aa12.4□□□□□ -0.42
RN7SKP253-201ENST00000516424 PRR7Q8TB68 274 aa12.39□□□□□ -0.43
RN7SKP253-201ENST00000516424 ALDH1A1P00352 501 aa12.38□□□□□ -0.43
RN7SKP253-201ENST00000516424 PTPRNQ16849 979 aa12.38□□□□□ -0.43
RN7SKP253-201ENST00000516424 TREML4Q6UXN2 200 aa12.38□□□□□ -0.43
RN7SKP253-201ENST00000516424 EHBP1Q8NDI1 1231 aa12.38□□□□□ -0.43
RN7SKP253-201ENST00000516424 MTMR2Q13614 643 aa12.37□□□□□ -0.43
RN7SKP253-201ENST00000516424 LCE2AQ5TA79 106 aaPredicted RBP12.37□□□□□ -0.43
RN7SKP253-201ENST00000516424 TBC1D2Q9BYX2 928 aa12.37□□□□□ -0.43
RN7SKP253-201ENST00000516424 TRIM66O15016 1216 aa12.36□□□□□ -0.43
RN7SKP253-201ENST00000516424 SH3BP2P78314 561 aa12.36□□□□□ -0.43
RN7SKP253-201ENST00000516424 SIAH2O43255 324 aa12.35□□□□□ -0.43
RN7SKP253-201ENST00000516424 UNC93B1Q9H1C4 597 aa12.35□□□□□ -0.43
RN7SKP253-201ENST00000516424 EVA1BQ9NVM1 165 aa12.35□□□□□ -0.43
RN7SKP253-201ENST00000516424 RSBN1LQ6PCB5 846 aaPredicted RBP12.34□□□□□ -0.43
RN7SKP253-201ENST00000516424 SPDYE5A6NIY4 337 aa12.33□□□□□ -0.44
RN7SKP253-201ENST00000516424 SNRPBP14678 240 aaKnown RBP12.33□□□□□ -0.44
RN7SKP253-201ENST00000516424 LINC01559Q495D7 138 aa12.33□□□□□ -0.44
RN7SKP253-201ENST00000516424 KCNH2Q12809 1159 aa12.32□□□□□ -0.44
RN7SKP253-201ENST00000516424 DESI1Q6ICB0 168 aa12.32□□□□□ -0.44
RN7SKP253-201ENST00000516424 PCDHB15Q9Y5E8 787 aa12.32□□□□□ -0.44
RN7SKP253-201ENST00000516424 GJA5P36382 358 aa12.31□□□□□ -0.44
RN7SKP253-201ENST00000516424 BAP1Q92560 729 aa12.31□□□□□ -0.44
RN7SKP253-201ENST00000516424 TRIM47Q96LD4 638 aa12.31□□□□□ -0.44
RN7SKP253-201ENST00000516424 AK7Q96M32 723 aa12.31□□□□□ -0.44
RN7SKP253-201ENST00000516424 DIXDC1Q155Q3 683 aa12.3□□□□□ -0.44
RN7SKP253-201ENST00000516424 SENP2Q9HC62 589 aa12.29□□□□□ -0.44
RN7SKP253-201ENST00000516424 CFAP99D6REC4 459 aa12.28□□□□□ -0.44
RN7SKP253-201ENST00000516424 SPTLC1O15269 473 aa12.28□□□□□ -0.44
RN7SKP253-201ENST00000516424 WASF2Q9Y6W5 498 aa12.28□□□□□ -0.44
RN7SKP253-201ENST00000516424 WFS1O76024 890 aa12.27□□□□□ -0.45
RN7SKP253-201ENST00000516424 NFX1Q12986 1120 aaKnown RBP12.27□□□□□ -0.45
RN7SKP253-201ENST00000516424 ZNF511Q8NB15 262 aa12.27□□□□□ -0.45
RN7SKP253-201ENST00000516424 TLL2Q9Y6L7 1015 aa12.27□□□□□ -0.45
RN7SKP253-201ENST00000516424 HRCP23327 699 aa12.26□□□□□ -0.45
RN7SKP253-201ENST00000516424 LYPD8Q6UX82 237 aa12.26□□□□□ -0.45
RN7SKP253-201ENST00000516424 CTHP32929 405 aa12.25□□□□□ -0.45
RN7SKP253-201ENST00000516424 RIC3Q7Z5B4 369 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms