RNA–Protein interactions for RNA: ENST00000516296.1

RNU1-143P-201, Transcript of RNA, U1 small nuclear 143, pseudogene, humanhuman

BASIC

Gene RNU1-143P, Length 146 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-143P-201ENST00000516296 ARHGEF40Q8TER5 1519 aa4.31□□□□□ -1.72
RNU1-143P-201ENST00000516296 DLC1Q96QB1 1528 aa4.31□□□□□ -1.72
RNU1-143P-201ENST00000516296 MED14O60244 1454 aa4.3□□□□□ -1.72
RNU1-143P-201ENST00000516296 CD163L1Q9NR16 1453 aa4.3□□□□□ -1.72
RNU1-143P-201ENST00000516296 NSD3Q9BZ95 1437 aa4.3□□□□□ -1.72
RNU1-143P-201ENST00000516296 YEATS2Q9ULM3 1422 aa4.3□□□□□ -1.72
RNU1-143P-201ENST00000516296 TUBGCP6Q96RT7 1819 aa4.3□□□□□ -1.72
RNU1-143P-201ENST00000516296 CFAP70Q5T0N1 1121 aa4.3□□□□□ -1.72
RNU1-143P-201ENST00000516296 C20orf194Q5TEA3 1177 aa4.3□□□□□ -1.72
RNU1-143P-201ENST00000516296 CRBNQ96SW2 442 aa4.3□□□□□ -1.72
RNU1-143P-201ENST00000516296 ALKQ9UM73 1620 aa4.3□□□□□ -1.72
RNU1-143P-201ENST00000516296 CACNA1FO60840 1977 aa4.3□□□□□ -1.72
RNU1-143P-201ENST00000516296 AGLP35573 1532 aa4.3□□□□□ -1.72
RNU1-143P-201ENST00000516296 UBR1Q8IWV7 1749 aa4.29□□□□□ -1.72
RNU1-143P-201ENST00000516296 MARF1Q9Y4F3 1742 aaKnown RBP4.29□□□□□ -1.72
RNU1-143P-201ENST00000516296 TCERG1O14776 1098 aaKnown RBP4.29□□□□□ -1.72
RNU1-143P-201ENST00000516296 PLIN1O60240 522 aa4.29□□□□□ -1.72
RNU1-143P-201ENST00000516296 MS4A1P11836 297 aa4.29□□□□□ -1.72
RNU1-143P-201ENST00000516296 SLFN5Q08AF3 891 aa4.29□□□□□ -1.72
RNU1-143P-201ENST00000516296 CDCA8Q53HL2 280 aa4.29□□□□□ -1.72
RNU1-143P-201ENST00000516296 PHF23Q9BUL5 403 aaPredicted RBP4.29□□□□□ -1.72
RNU1-143P-201ENST00000516296 BACH2Q9BYV9 841 aa4.29□□□□□ -1.72
RNU1-143P-201ENST00000516296 SPINK5Q9NQ38 1064 aaPredicted RBP4.29□□□□□ -1.72
RNU1-143P-201ENST00000516296 NOP58Q9Y2X3 529 aaKnown RBP4.29□□□□□ -1.72
RNU1-143P-201ENST00000516296 KNSTRNQ9Y448 316 aa4.29□□□□□ -1.72
RNU1-143P-201ENST00000516296 DMRT2Q9Y5R5 561 aa4.29□□□□□ -1.72
RNU1-143P-201ENST00000516296 LRRC7Q96NW7 1537 aa4.29□□□□□ -1.72
RNU1-143P-201ENST00000516296 RGPD1P0DJD0 1748 aa4.29□□□□□ -1.72
RNU1-143P-201ENST00000516296 CENPJQ9HC77 1338 aaPredicted RBP4.28□□□□□ -1.72
RNU1-143P-201ENST00000516296 RGPD8O14715 1765 aaPredicted RBP4.28□□□□□ -1.72
RNU1-143P-201ENST00000516296 CPS1P31327 1500 aa4.28□□□□□ -1.72
RNU1-143P-201ENST00000516296 SKAP1Q86WV1 359 aa4.28□□□□□ -1.72
RNU1-143P-201ENST00000516296 IPO9Q96P70 1041 aaKnown RBP4.28□□□□□ -1.72
RNU1-143P-201ENST00000516296 C14orf93Q9H972 538 aaKnown RBP4.28□□□□□ -1.72
RNU1-143P-201ENST00000516296 SALL2Q9Y467 1007 aaPredicted RBP4.28□□□□□ -1.72
RNU1-143P-201ENST00000516296 USP54Q70EL1 1684 aa4.28□□□□□ -1.72
RNU1-143P-201ENST00000516296 NSD2O96028 1365 aa4.27□□□□□ -1.73
RNU1-143P-201ENST00000516296 ANKRD36BQ8N2N9 1353 aa4.27□□□□□ -1.73
RNU1-143P-201ENST00000516296 ABCC11Q96J66 1382 aa4.27□□□□□ -1.73
RNU1-143P-201ENST00000516296 NINLQ9Y2I6 1382 aa4.27□□□□□ -1.73
RNU1-143P-201ENST00000516296 RPGRIP1LQ68CZ1 1315 aa4.27□□□□□ -1.73
RNU1-143P-201ENST00000516296 PDE4AP27815 886 aa4.27□□□□□ -1.73
RNU1-143P-201ENST00000516296 AK9Q5TCS8 1911 aa4.27□□□□□ -1.73
RNU1-143P-201ENST00000516296 PEAK1Q9H792 1746 aa4.26□□□□□ -1.73
RNU1-143P-201ENST00000516296 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.26□□□□□ -1.73
RNU1-143P-201ENST00000516296 GOLGA2Q08379 1002 aa4.26□□□□□ -1.73
RNU1-143P-201ENST00000516296 WDR43Q15061 677 aaKnown RBP eCLIP4.26□□□□□ -1.73
RNU1-143P-201ENST00000516296 CCDC146Q8IYE0 955 aa4.26□□□□□ -1.73
RNU1-143P-201ENST00000516296 PUS7Q96PZ0 661 aaKnown RBP4.26□□□□□ -1.73
RNU1-143P-201ENST00000516296 YTHDC2Q9H6S0 1430 aaKnown RBP4.26□□□□□ -1.73
RNU1-143P-201ENST00000516296 A0A1W2PP64 1363 aa4.26□□□□□ -1.73
RNU1-143P-201ENST00000516296 A2ML1A8K2U0 1454 aa4.25□□□□□ -1.73
RNU1-143P-201ENST00000516296 ATP7BP35670 1465 aa4.25□□□□□ -1.73
RNU1-143P-201ENST00000516296 LRRC37A3O60309 1634 aa4.25□□□□□ -1.73
RNU1-143P-201ENST00000516296 APAF1O14727 1248 aa4.25□□□□□ -1.73
RNU1-143P-201ENST00000516296 SLC24A1O60721 1099 aa4.25□□□□□ -1.73
RNU1-143P-201ENST00000516296 C8orf34Q49A92 452 aa4.25□□□□□ -1.73
RNU1-143P-201ENST00000516296 CENPQQ7L2Z9 268 aaPredicted RBP4.25□□□□□ -1.73
RNU1-143P-201ENST00000516296 NGEFQ8N5V2 710 aa4.25□□□□□ -1.73
RNU1-143P-201ENST00000516296 BCL11AQ9H165 835 aa4.25□□□□□ -1.73
RNU1-143P-201ENST00000516296 MYT1LQ9UL68 1186 aa4.25□□□□□ -1.73
RNU1-143P-201ENST00000516296 FAM208AQ9UK61 1670 aaKnown RBP4.25□□□□□ -1.73
RNU1-143P-201ENST00000516296 ZMYM3Q14202 1370 aa4.25□□□□□ -1.73
RNU1-143P-201ENST00000516296 USP19O94966 1318 aa4.24□□□□□ -1.73
RNU1-143P-201ENST00000516296 E9PSI1 815 aa4.24□□□□□ -1.73
RNU1-143P-201ENST00000516296 ANP32AP39687 249 aaKnown RBP4.24□□□□□ -1.73
RNU1-143P-201ENST00000516296 NCBP3Q53F19 620 aaKnown RBP4.24□□□□□ -1.73
RNU1-143P-201ENST00000516296 WWC1Q8IX03 1113 aa4.24□□□□□ -1.73
RNU1-143P-201ENST00000516296 PNPLA6Q8IY17 1366 aa4.24□□□□□ -1.73
RNU1-143P-201ENST00000516296 XRN1Q8IZH2 1706 aaKnown RBP4.24□□□□□ -1.73
RNU1-143P-201ENST00000516296 TECPR2O15040 1411 aa4.23□□□□□ -1.73
RNU1-143P-201ENST00000516296 FAM135BQ49AJ0 1406 aa4.23□□□□□ -1.73
RNU1-143P-201ENST00000516296 FER1L4A9Z1Z3 1794 aa4.23□□□□□ -1.73
RNU1-143P-201ENST00000516296 BCAR3O75815 825 aa4.23□□□□□ -1.73
RNU1-143P-201ENST00000516296 RAPGEF3O95398 923 aa4.23□□□□□ -1.73
RNU1-143P-201ENST00000516296 CCDC27Q2M243 656 aa4.23□□□□□ -1.73
RNU1-143P-201ENST00000516296 TMEM132EQ6IEE7 984 aa4.23□□□□□ -1.73
RNU1-143P-201ENST00000516296 ERICH6Q7L0X2 663 aa4.23□□□□□ -1.73
RNU1-143P-201ENST00000516296 SLC12A5Q9H2X9 1139 aa4.23□□□□□ -1.73
RNU1-143P-201ENST00000516296 TRAK1Q9UPV9 953 aa4.23□□□□□ -1.73
RNU1-143P-201ENST00000516296 TNNQ9UQP3 1299 aa4.23□□□□□ -1.73
RNU1-143P-201ENST00000516296 CDK12Q9NYV4 1490 aaPredicted RBP4.23□□□□□ -1.73
RNU1-143P-201ENST00000516296 CGNL1Q0VF96 1302 aa4.22□□□□□ -1.73
RNU1-143P-201ENST00000516296 EVC2Q86UK5 1308 aa4.22□□□□□ -1.73
RNU1-143P-201ENST00000516296 PPIP5K1Q6PFW1 1433 aa4.22□□□□□ -1.73
RNU1-143P-201ENST00000516296 RLBP1P12271 317 aa4.22□□□□□ -1.73
RNU1-143P-201ENST00000516296 DEKP35659 375 aaKnown RBP4.22□□□□□ -1.73
RNU1-143P-201ENST00000516296 IDI1Q13907 227 aa4.22□□□□□ -1.73
RNU1-143P-201ENST00000516296 PDE3AQ14432 1141 aa4.22□□□□□ -1.73
RNU1-143P-201ENST00000516296 GGT6Q6P531 493 aa4.22□□□□□ -1.73
RNU1-143P-201ENST00000516296 OSCARQ8IYS5 282 aa4.22□□□□□ -1.73
RNU1-143P-201ENST00000516296 RUNDC1Q96C34 613 aa4.22□□□□□ -1.73
RNU1-143P-201ENST00000516296 ATAD2Q6PL18 1390 aa4.22□□□□□ -1.73
RNU1-143P-201ENST00000516296 PIK3C2AO00443 1686 aa4.22□□□□□ -1.73
RNU1-143P-201ENST00000516296 LTN1O94822 1766 aa4.22□□□□□ -1.73
RNU1-143P-201ENST00000516296 RGPD2P0DJD1 1756 aa4.22□□□□□ -1.73
RNU1-143P-201ENST00000516296 CPSF1Q10570 1443 aaKnown RBP4.21□□□□□ -1.73
RNU1-143P-201ENST00000516296 RIMS2Q9UQ26 1411 aa4.21□□□□□ -1.73
RNU1-143P-201ENST00000516296 IGHDP01880 384 aa4.21□□□□□ -1.74
RNU1-143P-201ENST00000516296 RARSP54136 660 aaKnown RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms