RNA–Protein interactions for RNA: ENST00000516211.1

SCARNA17.1-201, small Cajal body-specific RNA 17, humanhuman

BASIC

Gene SCARNA17, Length 143 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA17.1-201ENST00000516211 SLC4A3P48751 1232 aa4.13□□□□□ -1.75
SCARNA17.1-201ENST00000516211 SRPK2P78362 688 aaKnown RBP4.13□□□□□ -1.75
SCARNA17.1-201ENST00000516211 RTL5Q5HYW3 569 aaPredicted RBP4.13□□□□□ -1.75
SCARNA17.1-201ENST00000516211 PELP1Q8IZL8 1130 aaKnown RBP4.13□□□□□ -1.75
SCARNA17.1-201ENST00000516211 TTC13Q8NBP0 860 aa4.13□□□□□ -1.75
SCARNA17.1-201ENST00000516211 TSC1Q92574 1164 aa4.13□□□□□ -1.75
SCARNA17.1-201ENST00000516211 CDCA7LQ96GN5 454 aa4.13□□□□□ -1.75
SCARNA17.1-201ENST00000516211 ALG2Q9H553 416 aa4.13□□□□□ -1.75
SCARNA17.1-201ENST00000516211 C19orf67A6NJJ6 358 aa4.12□□□□□ -1.75
SCARNA17.1-201ENST00000516211 FDX1P10109 184 aa4.12□□□□□ -1.75
SCARNA17.1-201ENST00000516211 NDUFV2P19404 249 aa4.12□□□□□ -1.75
SCARNA17.1-201ENST00000516211 CANXP27824 592 aaKnown RBP4.12□□□□□ -1.75
SCARNA17.1-201ENST00000516211 ARID4AP29374 1257 aaPredicted RBP4.12□□□□□ -1.75
SCARNA17.1-201ENST00000516211 ATN1P54259 1190 aaPredicted RBP4.12□□□□□ -1.75
SCARNA17.1-201ENST00000516211 GRIPAP1Q4V328 841 aa4.12□□□□□ -1.75
SCARNA17.1-201ENST00000516211 FBXO31Q5XUX0 539 aaPredicted RBP4.12□□□□□ -1.75
SCARNA17.1-201ENST00000516211 TMEM92Q6UXU6 159 aa4.12□□□□□ -1.75
SCARNA17.1-201ENST00000516211 CABLES1Q8TDN4 633 aa4.12□□□□□ -1.75
SCARNA17.1-201ENST00000516211 ADAMTS19Q8TE59 1207 aa4.12□□□□□ -1.75
SCARNA17.1-201ENST00000516211 GJD4Q96KN9 370 aaPredicted RBP4.12□□□□□ -1.75
SCARNA17.1-201ENST00000516211 MAFBQ9Y5Q3 323 aaPredicted RBP4.12□□□□□ -1.75
SCARNA17.1-201ENST00000516211 TMEM88BA6NKF7 163 aa4.11□□□□□ -1.75
SCARNA17.1-201ENST00000516211 ATP9BO43861 1147 aa4.11□□□□□ -1.75
SCARNA17.1-201ENST00000516211 FOSBP53539 338 aa4.11□□□□□ -1.75
SCARNA17.1-201ENST00000516211 MYT1Q01538 1121 aa4.11□□□□□ -1.75
SCARNA17.1-201ENST00000516211 MTMR2Q13614 643 aa4.11□□□□□ -1.75
SCARNA17.1-201ENST00000516211 ELOAQ14241 798 aaKnown RBP4.11□□□□□ -1.75
SCARNA17.1-201ENST00000516211 CDCA8Q53HL2 280 aa4.11□□□□□ -1.75
SCARNA17.1-201ENST00000516211 ZNF454Q8N9F8 522 aa4.11□□□□□ -1.75
SCARNA17.1-201ENST00000516211 ZNF592Q92610 1267 aa4.11□□□□□ -1.75
SCARNA17.1-201ENST00000516211 PCDHB15Q9Y5E8 787 aa4.11□□□□□ -1.75
SCARNA17.1-201ENST00000516211 PCDHGA4Q9Y5G9 962 aa4.11□□□□□ -1.75
SCARNA17.1-201ENST00000516211 GALR2O43603 387 aaPredicted RBP4.1□□□□□ -1.75
SCARNA17.1-201ENST00000516211 ZNF326Q5BKZ1 582 aaKnown RBP4.1□□□□□ -1.75
SCARNA17.1-201ENST00000516211 MRRFQ96E11 262 aaKnown RBP4.1□□□□□ -1.75
SCARNA17.1-201ENST00000516211 SIRT1Q96EB6 747 aa4.1□□□□□ -1.75
SCARNA17.1-201ENST00000516211 BCL2L13Q9BXK5 485 aa4.1□□□□□ -1.75
SCARNA17.1-201ENST00000516211 CARNS1A5YM72 827 aa4.09□□□□□ -1.75
SCARNA17.1-201ENST00000516211 ATMINO43313 823 aaPredicted RBP4.09□□□□□ -1.75
SCARNA17.1-201ENST00000516211 HOXA2O43364 376 aa4.09□□□□□ -1.75
SCARNA17.1-201ENST00000516211 CTDSPL2Q05D32 466 aa4.09□□□□□ -1.75
SCARNA17.1-201ENST00000516211 ASTLQ6HA08 431 aaPredicted RBP4.09□□□□□ -1.75
SCARNA17.1-201ENST00000516211 PACS2Q86VP3 889 aa4.09□□□□□ -1.75
SCARNA17.1-201ENST00000516211 SLF2Q8IX21 1173 aa4.09□□□□□ -1.75
SCARNA17.1-201ENST00000516211 TMEM134Q9H6X4 195 aa4.09□□□□□ -1.75
SCARNA17.1-201ENST00000516211 NOVA2Q9UNW9 492 aaKnown RBP4.09□□□□□ -1.75
SCARNA17.1-201ENST00000516211 C6orf229H3BNL8 230 aa4.08□□□□□ -1.76
SCARNA17.1-201ENST00000516211 HDGFP51858 240 aaKnown RBP4.08□□□□□ -1.76
SCARNA17.1-201ENST00000516211 LARP1Q6PKG0 1096 aaKnown RBP4.08□□□□□ -1.76
SCARNA17.1-201ENST00000516211 NUDT18Q6ZVK8 323 aa4.08□□□□□ -1.76
SCARNA17.1-201ENST00000516211 NFATC2IPQ8NCF5 419 aa4.08□□□□□ -1.76
SCARNA17.1-201ENST00000516211 PRR7Q8TB68 274 aa4.08□□□□□ -1.76
SCARNA17.1-201ENST00000516211 UCN2Q96RP3 112 aa4.08□□□□□ -1.76
SCARNA17.1-201ENST00000516211 EYA1Q99502 592 aa4.08□□□□□ -1.76
SCARNA17.1-201ENST00000516211 TRIM34Q9BYJ4 488 aa4.08□□□□□ -1.76
SCARNA17.1-201ENST00000516211 KIF13AQ9H1H9 1805 aa4.08□□□□□ -1.76
SCARNA17.1-201ENST00000516211 PDS5BQ9NTI5 1447 aa4.08□□□□□ -1.76
SCARNA17.1-201ENST00000516211 BIN2Q9UBW5 565 aaPredicted RBP4.08□□□□□ -1.76
SCARNA17.1-201ENST00000516211 PNMA3Q9UL41 463 aa4.08□□□□□ -1.76
SCARNA17.1-201ENST00000516211 ATAD2BQ9ULI0 1458 aa4.08□□□□□ -1.76
SCARNA17.1-201ENST00000516211 SMARCA4P51532 1647 aa4.07□□□□□ -1.76
SCARNA17.1-201ENST00000516211 PSDA5PKW4 1024 aaPredicted RBP4.07□□□□□ -1.76
SCARNA17.1-201ENST00000516211 UNCXA6NJT0 531 aa4.07□□□□□ -1.76
SCARNA17.1-201ENST00000516211 TCF3P15923 654 aa4.07□□□□□ -1.76
SCARNA17.1-201ENST00000516211 GCGRP47871 477 aa4.07□□□□□ -1.76
SCARNA17.1-201ENST00000516211 MARSP56192 900 aaKnown RBP4.07□□□□□ -1.76
SCARNA17.1-201ENST00000516211 TBC1D9Q6ZT07 1266 aa4.07□□□□□ -1.76
SCARNA17.1-201ENST00000516211 TXNDC2Q86VQ3 553 aa4.07□□□□□ -1.76
SCARNA17.1-201ENST00000516211 KCNH8Q96L42 1107 aa4.07□□□□□ -1.76
SCARNA17.1-201ENST00000516211 DRC1Q96MC2 740 aa4.07□□□□□ -1.76
SCARNA17.1-201ENST00000516211 HMX1Q9NP08 348 aaPredicted RBP4.07□□□□□ -1.76
SCARNA17.1-201ENST00000516211 FAM196BA6NMK8 535 aa4.06□□□□□ -1.76
SCARNA17.1-201ENST00000516211 RIMBP2O15034 1052 aa4.06□□□□□ -1.76
SCARNA17.1-201ENST00000516211 PTPREP23469 700 aa4.06□□□□□ -1.76
SCARNA17.1-201ENST00000516211 ITGAEP38570 1179 aa4.06□□□□□ -1.76
SCARNA17.1-201ENST00000516211 HSPA2P54652 639 aa4.06□□□□□ -1.76
SCARNA17.1-201ENST00000516211 FAM69CQ0P6D2 419 aa4.06□□□□□ -1.76
SCARNA17.1-201ENST00000516211 NR1H3Q13133 447 aa4.06□□□□□ -1.76
SCARNA17.1-201ENST00000516211 SF3A1Q15459 793 aaKnown RBP4.06□□□□□ -1.76
SCARNA17.1-201ENST00000516211 PPP4R3BQ5MIZ7 849 aa4.06□□□□□ -1.76
SCARNA17.1-201ENST00000516211 TMEM164Q5U3C3 297 aa4.06□□□□□ -1.76
SCARNA17.1-201ENST00000516211 FAM200AQ8TCP9 573 aa4.06□□□□□ -1.76
SCARNA17.1-201ENST00000516211 GIPC2Q8TF65 315 aa4.06□□□□□ -1.76
SCARNA17.1-201ENST00000516211 LRRN4Q8WUT4 740 aa4.06□□□□□ -1.76
SCARNA17.1-201ENST00000516211 SREK1Q8WXA9 508 aaKnown RBP4.06□□□□□ -1.76
SCARNA17.1-201ENST00000516211 TATDN2Q93075 761 aa4.06□□□□□ -1.76
SCARNA17.1-201ENST00000516211 C8orf37Q96NL8 207 aa4.06□□□□□ -1.76
SCARNA17.1-201ENST00000516211 ADAM33Q9BZ11 813 aa4.06□□□□□ -1.76
SCARNA17.1-201ENST00000516211 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.06□□□□□ -1.76
SCARNA17.1-201ENST00000516211 RBM19Q9Y4C8 960 aaKnown RBP4.06□□□□□ -1.76
SCARNA17.1-201ENST00000516211 CHD1O14646 1710 aa4.06□□□□□ -1.76
SCARNA17.1-201ENST00000516211 LAMC3Q9Y6N6 1575 aa4.06□□□□□ -1.76
SCARNA17.1-201ENST00000516211 USP17L3A6NCW0 530 aa4.05□□□□□ -1.76
SCARNA17.1-201ENST00000516211 USP17L4A6NCW7 530 aa4.05□□□□□ -1.76
SCARNA17.1-201ENST00000516211 SOWAHDA6NJG2 315 aa4.05□□□□□ -1.76
SCARNA17.1-201ENST00000516211 PPP1R3GB7ZBB8 358 aa4.05□□□□□ -1.76
SCARNA17.1-201ENST00000516211 ATP5J2-PTCD1G3V325 749 aa4.05□□□□□ -1.76
SCARNA17.1-201ENST00000516211 LZTS3O60299 673 aaPredicted RBP4.05□□□□□ -1.76
SCARNA17.1-201ENST00000516211 SKIP12755 728 aa4.05□□□□□ -1.76
SCARNA17.1-201ENST00000516211 ZNF16P17020 682 aaPredicted RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms