RNA–Protein interactions for RNA: ENST00000515982.1

SCARNA6-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 265 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6-201ENST00000515982 WAPLQ7Z5K2 1190 aa9.92□□□□□ -0.82
SCARNA6-201ENST00000515982 STRCP1A6NGW2 1772 aa9.92□□□□□ -0.82
SCARNA6-201ENST00000515982 PTCH1Q13635 1447 aa9.91□□□□□ -0.82
SCARNA6-201ENST00000515982 ST20-MTHFSA0A0A6YYL1 179 aa9.91□□□□□ -0.82
SCARNA6-201ENST00000515982 NKTRP30414 1462 aaKnown RBP9.91□□□□□ -0.82
SCARNA6-201ENST00000515982 NCOA3Q9Y6Q9 1424 aa9.9□□□□□ -0.82
SCARNA6-201ENST00000515982 KNDC1Q76NI1 1749 aa9.9□□□□□ -0.82
SCARNA6-201ENST00000515982 ROBO2Q9HCK4 1378 aa9.9□□□□□ -0.82
SCARNA6-201ENST00000515982 NWD1Q149M9 1564 aa9.9□□□□□ -0.82
SCARNA6-201ENST00000515982 HSPA5P11021 654 aaKnown RBP9.9□□□□□ -0.82
SCARNA6-201ENST00000515982 C14orf37Q86TY3 774 aa9.9□□□□□ -0.82
SCARNA6-201ENST00000515982 XRN1Q8IZH2 1706 aaKnown RBP9.9□□□□□ -0.83
SCARNA6-201ENST00000515982 SAFB2Q14151 953 aaKnown RBP eCLIP9.89□□□□□ -0.83
SCARNA6-201ENST00000515982 C19orf44Q9H6X5 657 aa9.89□□□□□ -0.83
SCARNA6-201ENST00000515982 TMF1P82094 1093 aa9.88□□□□□ -0.83
SCARNA6-201ENST00000515982 CDCA8Q53HL2 280 aa9.88□□□□□ -0.83
SCARNA6-201ENST00000515982 TMEM94Q12767 1356 aa9.88□□□□□ -0.83
SCARNA6-201ENST00000515982 SBNO2Q9Y2G9 1366 aa9.88□□□□□ -0.83
SCARNA6-201ENST00000515982 EVC2Q86UK5 1308 aa9.87□□□□□ -0.83
SCARNA6-201ENST00000515982 MINK1Q8N4C8 1332 aaPredicted RBP9.87□□□□□ -0.83
SCARNA6-201ENST00000515982 ARHGEF28Q8N1W1 1705 aaKnown RBP9.87□□□□□ -0.83
SCARNA6-201ENST00000515982 PLEKHH1Q9ULM0 1364 aa9.87□□□□□ -0.83
SCARNA6-201ENST00000515982 WASLO00401 505 aaPredicted RBP9.86□□□□□ -0.83
SCARNA6-201ENST00000515982 ATF3P18847 181 aa9.86□□□□□ -0.83
SCARNA6-201ENST00000515982 RBM33Q96EV2 1170 aaKnown RBP9.86□□□□□ -0.83
SCARNA6-201ENST00000515982 PUS7Q96PZ0 661 aaKnown RBP9.86□□□□□ -0.83
SCARNA6-201ENST00000515982 TESK2Q96S53 571 aa9.86□□□□□ -0.83
SCARNA6-201ENST00000515982 MSH6P52701 1360 aa9.86□□□□□ -0.83
SCARNA6-201ENST00000515982 CADPS2Q86UW7 1296 aa9.85□□□□□ -0.83
SCARNA6-201ENST00000515982 HIRIP3Q9BW71 556 aaPredicted RBP9.85□□□□□ -0.83
SCARNA6-201ENST00000515982 CDK19Q9BWU1 502 aa9.85□□□□□ -0.83
SCARNA6-201ENST00000515982 ADGRL3Q9HAR2 1447 aa9.84□□□□□ -0.83
SCARNA6-201ENST00000515982 QRICH2Q9H0J4 1663 aa9.83□□□□□ -0.84
SCARNA6-201ENST00000515982 SRPK2P78362 688 aaKnown RBP9.83□□□□□ -0.84
SCARNA6-201ENST00000515982 XIRP1Q702N8 1843 aaKnown RBP9.83□□□□□ -0.84
SCARNA6-201ENST00000515982 DCCP43146 1447 aa9.82□□□□□ -0.84
SCARNA6-201ENST00000515982 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.82□□□□□ -0.84
SCARNA6-201ENST00000515982 ZNF316A6NFI3 1004 aaPredicted RBP9.82□□□□□ -0.84
SCARNA6-201ENST00000515982 UPF1Q92900 1129 aaKnown RBP eCLIP9.82□□□□□ -0.842e-35■□□□□ 9.8
SCARNA6-201ENST00000515982 NUDT16Q96DE0 195 aaKnown RBP9.81□□□□□ -0.84
SCARNA6-201ENST00000515982 CABP2Q9NPB3 220 aa9.81□□□□□ -0.84
SCARNA6-201ENST00000515982 CCDC61Q9Y6R9 512 aa9.81□□□□□ -0.84
SCARNA6-201ENST00000515982 ADGRB2O60241 1585 aa9.8□□□□□ -0.84
SCARNA6-201ENST00000515982 ATAD2Q6PL18 1390 aa9.8□□□□□ -0.84
SCARNA6-201ENST00000515982 POLR3GLQ9BT43 218 aa9.8□□□□□ -0.84
SCARNA6-201ENST00000515982 SLAIN2Q9P270 581 aa9.8□□□□□ -0.84
SCARNA6-201ENST00000515982 ANKARQ7Z5J8 1434 aa9.8□□□□□ -0.84
SCARNA6-201ENST00000515982 CDC42BPGQ6DT37 1551 aa9.8□□□□□ -0.84
SCARNA6-201ENST00000515982 NUTM2FA1L443 756 aa9.79□□□□□ -0.84
SCARNA6-201ENST00000515982 C11orf95C9JLR9 678 aaPredicted RBP9.79□□□□□ -0.84
SCARNA6-201ENST00000515982 NALCNQ8IZF0 1738 aa9.79□□□□□ -0.84
SCARNA6-201ENST00000515982 ESCO1Q5FWF5 840 aa9.78□□□□□ -0.84
SCARNA6-201ENST00000515982 TMC1Q8TDI8 760 aa9.78□□□□□ -0.84
SCARNA6-201ENST00000515982 KIF7Q2M1P5 1343 aa9.78□□□□□ -0.84
SCARNA6-201ENST00000515982 TULP4Q9NRJ4 1543 aa9.77□□□□□ -0.84
SCARNA6-201ENST00000515982 CCDC7Q96M83 1385 aa9.77□□□□□ -0.84
SCARNA6-201ENST00000515982 NINLQ9Y2I6 1382 aa9.77□□□□□ -0.84
SCARNA6-201ENST00000515982 PLEKHG3A1L390 1219 aa9.77□□□□□ -0.85
SCARNA6-201ENST00000515982 ZNF692Q9BU19 519 aaPredicted RBP9.77□□□□□ -0.85
SCARNA6-201ENST00000515982 CABP1Q9NZU7 370 aa9.77□□□□□ -0.85
SCARNA6-201ENST00000515982 ROBO1Q9Y6N7 1651 aa9.77□□□□□ -0.85
SCARNA6-201ENST00000515982 FMN2Q9NZ56 1722 aa9.76□□□□□ -0.85
SCARNA6-201ENST00000515982 TERF2IPQ9NYB0 399 aa9.76□□□□□ -0.85
SCARNA6-201ENST00000515982 PHF8Q9UPP1 1060 aa9.76□□□□□ -0.85
SCARNA6-201ENST00000515982 C1orf167Q5SNV9 1468 aa9.76□□□□□ -0.85
SCARNA6-201ENST00000515982 WASHC2AQ641Q2 1341 aa9.76□□□□□ -0.85
SCARNA6-201ENST00000515982 PRR36Q9H6K5 1346 aa9.76□□□□□ -0.85
SCARNA6-201ENST00000515982 JCADQ9P266 1359 aa9.75□□□□□ -0.85
SCARNA6-201ENST00000515982 MST1RQ04912 1400 aa9.75□□□□□ -0.85
SCARNA6-201ENST00000515982 HDGFL2Q7Z4V5 671 aaPredicted RBP9.75□□□□□ -0.85
SCARNA6-201ENST00000515982 NGDNQ8NEJ9 315 aaKnown RBP9.75□□□□□ -0.85
SCARNA6-201ENST00000515982 ORAI2Q96SN7 254 aa9.75□□□□□ -0.85
SCARNA6-201ENST00000515982 SLC12A5Q9H2X9 1139 aa9.75□□□□□ -0.85
SCARNA6-201ENST00000515982 PPIP5K1Q6PFW1 1433 aa9.74□□□□□ -0.85
SCARNA6-201ENST00000515982 PSME1Q06323 249 aa9.74□□□□□ -0.85
SCARNA6-201ENST00000515982 PMFBP1Q8TBY8 1022 aa9.74□□□□□ -0.85
SCARNA6-201ENST00000515982 ATP7BP35670 1465 aa9.73□□□□□ -0.85
SCARNA6-201ENST00000515982 ZNF772Q68DY9 489 aaPredicted RBP9.73□□□□□ -0.85
SCARNA6-201ENST00000515982 BRINP3Q76B58 766 aa9.73□□□□□ -0.85
SCARNA6-201ENST00000515982 PANK3Q9H999 370 aa9.73□□□□□ -0.85
SCARNA6-201ENST00000515982 ACEP12821 1306 aa9.73□□□□□ -0.85
SCARNA6-201ENST00000515982 ITSN1Q15811 1721 aa9.73□□□□□ -0.85
SCARNA6-201ENST00000515982 RGPD8O14715 1765 aaPredicted RBP9.73□□□□□ -0.85
SCARNA6-201ENST00000515982 FOXO3O43524 673 aa9.72□□□□□ -0.85
SCARNA6-201ENST00000515982 NPHP3Q7Z494 1330 aa9.72□□□□□ -0.85
SCARNA6-201ENST00000515982 POLR3AO14802 1390 aaPredicted RBP9.72□□□□□ -0.85
SCARNA6-201ENST00000515982 ANKRD36BQ8N2N9 1353 aa9.72□□□□□ -0.85
SCARNA6-201ENST00000515982 SRCAPQ6ZRS2 3230 aa9.71□□□□□ -0.85
SCARNA6-201ENST00000515982 LRP6O75581 1613 aa9.71□□□□□ -0.85
SCARNA6-201ENST00000515982 USP32Q8NFA0 1604 aa9.71□□□□□ -0.85
SCARNA6-201ENST00000515982 RXRBP28702 533 aa9.71□□□□□ -0.86
SCARNA6-201ENST00000515982 DDX10Q13206 875 aaKnown RBP9.71□□□□□ -0.86
SCARNA6-201ENST00000515982 KRT28Q7Z3Y7 464 aa9.71□□□□□ -0.86
SCARNA6-201ENST00000515982 BRD4O60885 1362 aaPredicted RBP9.71□□□□□ -0.86
SCARNA6-201ENST00000515982 KIF1AQ12756 1690 aa9.71□□□□□ -0.86
SCARNA6-201ENST00000515982 PHLPP1O60346 1717 aa9.7□□□□□ -0.86
SCARNA6-201ENST00000515982 MEX3CQ5U5Q3 659 aaKnown RBP9.7□□□□□ -0.86
SCARNA6-201ENST00000515982 SPATA31A6Q5VVP1 1343 aa9.7□□□□□ -0.86
SCARNA6-201ENST00000515982 KTN1Q86UP2 1357 aaKnown RBP9.7□□□□□ -0.86
SCARNA6-201ENST00000515982 CPSF1Q10570 1443 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms