RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 FNBP4Q8N3X1 1017 aaPredicted RBP23.76■■□□□ 1.39
LMNA-223ENST00000515459 ATAD2Q6PL18 1390 aa23.76■■□□□ 1.39
LMNA-223ENST00000515459 CDC42BPGQ6DT37 1551 aa23.75■■□□□ 1.39
LMNA-223ENST00000515459 NPHP3Q7Z494 1330 aa23.74■■□□□ 1.39
LMNA-223ENST00000515459 ESCO1Q5FWF5 840 aa23.73■■□□□ 1.39
LMNA-223ENST00000515459 MARF1Q9Y4F3 1742 aaKnown RBP23.72■■□□□ 1.39
LMNA-223ENST00000515459 MYOM2P54296 1465 aa23.71■■□□□ 1.39
LMNA-223ENST00000515459 ATRNO75882 1429 aa23.71■■□□□ 1.39
LMNA-223ENST00000515459 PXDNQ92626 1479 aa23.7■■□□□ 1.38
LMNA-223ENST00000515459 FOXO3O43524 673 aa23.67■■□□□ 1.38
LMNA-223ENST00000515459 LRPPRCP42704 1394 aaKnown RBP23.66■■□□□ 1.38
LMNA-223ENST00000515459 TECPR2O15040 1411 aa23.66■■□□□ 1.38
LMNA-223ENST00000515459 ADGRF5Q8IZF2 1346 aa23.65■■□□□ 1.38
LMNA-223ENST00000515459 BCL9LQ86UU0 1499 aa23.65■■□□□ 1.38
LMNA-223ENST00000515459 XPCQ01831 940 aaPredicted RBP23.65■■□□□ 1.38
LMNA-223ENST00000515459 FOXD1Q16676 465 aa23.65■■□□□ 1.38
LMNA-223ENST00000515459 CCDC144AA2RUR9 1427 aa23.65■■□□□ 1.38
LMNA-223ENST00000515459 STK26Q9P289 416 aa23.64■■□□□ 1.37
LMNA-223ENST00000515459 IFT172Q9UG01 1749 aa23.64■■□□□ 1.37
LMNA-223ENST00000515459 KNDC1Q76NI1 1749 aa23.63■■□□□ 1.37
LMNA-223ENST00000515459 WAPLQ7Z5K2 1190 aa23.63■■□□□ 1.37
LMNA-223ENST00000515459 NUTM2FA1L443 756 aa23.62■■□□□ 1.37
LMNA-223ENST00000515459 RGL3Q3MIN7 710 aa23.62■■□□□ 1.37
LMNA-223ENST00000515459 ANKRD30BQ9BXX2 1392 aa23.62■■□□□ 1.37
LMNA-223ENST00000515459 ABCC11Q96J66 1382 aa23.61■■□□□ 1.37
LMNA-223ENST00000515459 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.61■■□□□ 1.37
LMNA-223ENST00000515459 SPATA31E1Q6ZUB1 1445 aa23.6■■□□□ 1.37
LMNA-223ENST00000515459 FMN2Q9NZ56 1722 aa23.6■■□□□ 1.37
LMNA-223ENST00000515459 GJD4Q96KN9 370 aaPredicted RBP23.6■■□□□ 1.37
LMNA-223ENST00000515459 CCDC125Q86Z20 511 aa23.59■■□□□ 1.37
LMNA-223ENST00000515459 ZRANB1Q9UGI0 708 aa23.59■■□□□ 1.37
LMNA-223ENST00000515459 KIF1AQ12756 1690 aa23.59■■□□□ 1.37
LMNA-223ENST00000515459 TMEM132EQ6IEE7 984 aa23.58■■□□□ 1.37
LMNA-223ENST00000515459 PLEKHH1Q9ULM0 1364 aa23.57■■□□□ 1.36
LMNA-223ENST00000515459 PIK3C2GO75747 1445 aa23.57■■□□□ 1.36
LMNA-223ENST00000515459 SPATA31A3Q5VYP0 1347 aa23.56■■□□□ 1.36
LMNA-223ENST00000515459 YTHDC2Q9H6S0 1430 aaKnown RBP23.54■■□□□ 1.36
LMNA-223ENST00000515459 UNC5CLQ8IV45 518 aa23.54■■□□□ 1.36
LMNA-223ENST00000515459 SLIT2O94813 1529 aa23.54■■□□□ 1.36
LMNA-223ENST00000515459 MPHOSPH9Q99550 1183 aa23.53■■□□□ 1.36
LMNA-223ENST00000515459 GLI3P10071 1580 aa23.52■■□□□ 1.36
LMNA-223ENST00000515459 EP400Q96L91 3159 aa23.52■■□□□ 1.36
LMNA-223ENST00000515459 USP32Q8NFA0 1604 aa23.52■■□□□ 1.36
LMNA-223ENST00000515459 KRT28Q7Z3Y7 464 aa23.52■■□□□ 1.36
LMNA-223ENST00000515459 RGPD8O14715 1765 aaPredicted RBP23.52■■□□□ 1.36
LMNA-223ENST00000515459 RALGAPBQ86X10 1494 aa23.51■■□□□ 1.35
LMNA-223ENST00000515459 SIRT1Q96EB6 747 aa23.5■■□□□ 1.35
LMNA-223ENST00000515459 BRWD3Q6RI45 1802 aa23.47■■□□□ 1.35
LMNA-223ENST00000515459 HAP1P54257 671 aaPredicted RBP23.47■■□□□ 1.35
LMNA-223ENST00000515459 PSME1Q06323 249 aa23.47■■□□□ 1.35
LMNA-223ENST00000515459 BLMP54132 1417 aaPredicted RBP23.47■■□□□ 1.35
LMNA-223ENST00000515459 TNS3Q68CZ2 1445 aa23.47■■□□□ 1.35
LMNA-223ENST00000515459 SRCAPQ6ZRS2 3230 aa23.47■■□□□ 1.35
LMNA-223ENST00000515459 C14orf93Q9H972 538 aaKnown RBP23.46■■□□□ 1.35
LMNA-223ENST00000515459 PHF8Q9UPP1 1060 aa23.46■■□□□ 1.35
LMNA-223ENST00000515459 PLCH1Q4KWH8 1693 aa23.44■■□□□ 1.34
LMNA-223ENST00000515459 DHX57Q6P158 1386 aaKnown RBP23.44■■□□□ 1.34
LMNA-223ENST00000515459 NWD2Q9ULI1 1742 aa23.44■■□□□ 1.34
LMNA-223ENST00000515459 NRXN1Q9ULB1 1477 aa23.43■■□□□ 1.34
LMNA-223ENST00000515459 ABCA3Q99758 1704 aa23.42■■□□□ 1.34
LMNA-223ENST00000515459 SBNO1A3KN83 1393 aa23.42■■□□□ 1.34
LMNA-223ENST00000515459 VPS72Q15906 364 aa23.42■■□□□ 1.34
LMNA-223ENST00000515459 CABLES1Q8TDN4 633 aa23.42■■□□□ 1.34
LMNA-223ENST00000515459 CFAP70Q5T0N1 1121 aa23.41■■□□□ 1.34
LMNA-223ENST00000515459 SEPT12Q8IYM1 358 aa23.41■■□□□ 1.34
LMNA-223ENST00000515459 PLEKHG5O94827 1062 aa23.4■■□□□ 1.34
LMNA-223ENST00000515459 LMOD2Q6P5Q4 547 aa23.4■■□□□ 1.34
LMNA-223ENST00000515459 ARHGEF10O15013 1369 aa23.4■■□□□ 1.34
LMNA-223ENST00000515459 ACIN1Q9UKV3 1341 aaKnown RBP23.39■■□□□ 1.34
LMNA-223ENST00000515459 SF3B2Q13435 895 aaKnown RBP23.39■■□□□ 1.33
LMNA-223ENST00000515459 SAFB2Q14151 953 aaKnown RBP eCLIP23.39■■□□□ 1.33
LMNA-223ENST00000515459 PRAM1Q96QH2 718 aa23.39■■□□□ 1.33
LMNA-223ENST00000515459 CCDC9Q9Y3X0 531 aaKnown RBP23.39■■□□□ 1.33
LMNA-223ENST00000515459 DEFB132Q7Z7B7 95 aa23.37■■□□□ 1.33
LMNA-223ENST00000515459 ONECUT3O60422 494 aaPredicted RBP23.36■■□□□ 1.33
LMNA-223ENST00000515459 DLC1Q96QB1 1528 aa23.36■■□□□ 1.33
LMNA-223ENST00000515459 ANKARQ7Z5J8 1434 aa23.35■■□□□ 1.33
LMNA-223ENST00000515459 POGKQ9P215 609 aa23.35■■□□□ 1.33
LMNA-223ENST00000515459 KRT27Q7Z3Y8 459 aa23.34■■□□□ 1.33
LMNA-223ENST00000515459 PMFBP1Q8TBY8 1022 aa23.34■■□□□ 1.33
LMNA-223ENST00000515459 ADGRB2O60241 1585 aa23.34■■□□□ 1.33
LMNA-223ENST00000515459 FAM83GA6ND36 823 aa23.32■■□□□ 1.32
LMNA-223ENST00000515459 NRAPQ86VF7 1730 aa23.31■■□□□ 1.32
LMNA-223ENST00000515459 TRPM3Q9HCF6 1732 aaPredicted RBP23.31■■□□□ 1.32
LMNA-223ENST00000515459 A0A0G2JS52 829 aa23.29■■□□□ 1.32
LMNA-223ENST00000515459 MYT1Q01538 1121 aa23.29■■□□□ 1.32
LMNA-223ENST00000515459 ALS2Q96Q42 1657 aa23.28■■□□□ 1.32
LMNA-223ENST00000515459 ADGRB1O14514 1584 aa23.28■■□□□ 1.32
LMNA-223ENST00000515459 COL14A1Q05707 1796 aaKnown RBP23.28■■□□□ 1.32
LMNA-223ENST00000515459 GPRASP1Q5JY77 1395 aa23.27■■□□□ 1.32
LMNA-223ENST00000515459 BTG4Q9NY30 223 aa23.27■■□□□ 1.32
LMNA-223ENST00000515459 EIF3AQ14152 1382 aaKnown RBP23.27■■□□□ 1.31
LMNA-223ENST00000515459 HIRIP3Q9BW71 556 aaPredicted RBP23.26■■□□□ 1.31
LMNA-223ENST00000515459 BAG6P46379 1132 aa23.25■■□□□ 1.31
LMNA-223ENST00000515459 FAM98CQ17RN3 349 aaKnown RBP23.25■■□□□ 1.31
LMNA-223ENST00000515459 TRAK1Q9UPV9 953 aa23.25■■□□□ 1.31
LMNA-223ENST00000515459 LRP5O75197 1615 aa23.25■■□□□ 1.31
LMNA-223ENST00000515459 TULP4Q9NRJ4 1543 aa23.24■■□□□ 1.31
LMNA-223ENST00000515459 MINK1Q8N4C8 1332 aaPredicted RBP23.24■■□□□ 1.31
LMNA-223ENST00000515459 PRR36Q9H6K5 1346 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms