RNA–Protein interactions for RNA: ENST00000515417.5

RACK1-234, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-234ENST00000515417 ADGRB1O14514 1584 aa14.05□□□□□ -0.16
RACK1-234ENST00000515417 NALCNQ8IZF0 1738 aa14.04□□□□□ -0.16
RACK1-234ENST00000515417 NUTM2BA6NNL0 878 aaPredicted RBP14.03□□□□□ -0.16
RACK1-234ENST00000515417 NUTM2EB1AL46 878 aaPredicted RBP14.03□□□□□ -0.16
RACK1-234ENST00000515417 CADPS2Q86UW7 1296 aa14.03□□□□□ -0.16
RACK1-234ENST00000515417 NUTM2AQ8IVF1 878 aaPredicted RBP14.03□□□□□ -0.16
RACK1-234ENST00000515417 TRAK1Q9UPV9 953 aa14.03□□□□□ -0.16
RACK1-234ENST00000515417 LAMC1P11047 1609 aa14.03□□□□□ -0.16
RACK1-234ENST00000515417 NBPF1Q3BBV0 1214 aa14.02□□□□□ -0.17
RACK1-234ENST00000515417 DDX17Q92841 729 aaKnown RBP14.02□□□□□ -0.17
RACK1-234ENST00000515417 PRAM1Q96QH2 718 aa14.02□□□□□ -0.17
RACK1-234ENST00000515417 DCCP43146 1447 aa14.01□□□□□ -0.17
RACK1-234ENST00000515417 MST1RQ04912 1400 aa14.01□□□□□ -0.17
RACK1-234ENST00000515417 MEX3CQ5U5Q3 659 aaKnown RBP14.01□□□□□ -0.17
RACK1-234ENST00000515417 STAC3Q96MF2 364 aa14.01□□□□□ -0.17
RACK1-234ENST00000515417 KNDC1Q76NI1 1749 aa14□□□□□ -0.17
RACK1-234ENST00000515417 NUTM2FA1L443 756 aa13.99□□□□□ -0.17
RACK1-234ENST00000515417 BRINP3Q76B58 766 aa13.99□□□□□ -0.17
RACK1-234ENST00000515417 POGKQ9P215 609 aa13.99□□□□□ -0.17
RACK1-234ENST00000515417 TONSLQ96HA7 1378 aa13.98□□□□□ -0.17
RACK1-234ENST00000515417 NBPF8Q3BBV2 869 aa13.97□□□□□ -0.17
RACK1-234ENST00000515417 HIRIP3Q9BW71 556 aaPredicted RBP13.97□□□□□ -0.17
RACK1-234ENST00000515417 C1orf167Q5SNV9 1468 aa13.97□□□□□ -0.17
RACK1-234ENST00000515417 MINK1Q8N4C8 1332 aaPredicted RBP13.96□□□□□ -0.17
RACK1-234ENST00000515417 DLC1Q96QB1 1528 aa13.96□□□□□ -0.17
RACK1-234ENST00000515417 ORAI2Q96SN7 254 aa13.96□□□□□ -0.17
RACK1-234ENST00000515417 SPATA31A6Q5VVP1 1343 aa13.95□□□□□ -0.18
RACK1-234ENST00000515417 SIRT1Q96EB6 747 aa13.95□□□□□ -0.18
RACK1-234ENST00000515417 CDC42BPGQ6DT37 1551 aa13.95□□□□□ -0.18
RACK1-234ENST00000515417 RXRBP28702 533 aa13.94□□□□□ -0.18
RACK1-234ENST00000515417 ZNF772Q68DY9 489 aaPredicted RBP13.94□□□□□ -0.18
RACK1-234ENST00000515417 AHDC1Q5TGY3 1603 aaPredicted RBP13.93□□□□□ -0.18
RACK1-234ENST00000515417 AFF2P51816 1311 aa13.93□□□□□ -0.18
RACK1-234ENST00000515417 SRCAPQ6ZRS2 3230 aa13.93□□□□□ -0.18
RACK1-234ENST00000515417 CCER1Q8TC90 406 aaPredicted RBP13.92□□□□□ -0.18
RACK1-234ENST00000515417 ROCK2O75116 1388 aaKnown RBP13.92□□□□□ -0.18
RACK1-234ENST00000515417 KIAA1210Q9ULL0 1709 aa13.92□□□□□ -0.18
RACK1-234ENST00000515417 SHPRHQ149N8 1683 aa13.91□□□□□ -0.18
RACK1-234ENST00000515417 ARHGEF28Q8N1W1 1705 aaKnown RBP13.91□□□□□ -0.18
RACK1-234ENST00000515417 ESCO1Q5FWF5 840 aa13.91□□□□□ -0.18
RACK1-234ENST00000515417 TRPM1Q7Z4N2 1603 aa13.9□□□□□ -0.18
RACK1-234ENST00000515417 XPCQ01831 940 aaPredicted RBP13.9□□□□□ -0.18
RACK1-234ENST00000515417 C8orf37Q96NL8 207 aa13.9□□□□□ -0.18
RACK1-234ENST00000515417 FMN2Q9NZ56 1722 aa13.89□□□□□ -0.19
RACK1-234ENST00000515417 QTRT2Q9H974 415 aaKnown RBP13.88□□□□□ -0.19
RACK1-234ENST00000515417 RGS12O14924 1447 aa13.88□□□□□ -0.19
RACK1-234ENST00000515417 PRR36Q9H6K5 1346 aa13.88□□□□□ -0.19
RACK1-234ENST00000515417 CENPJQ9HC77 1338 aaPredicted RBP13.88□□□□□ -0.19
RACK1-234ENST00000515417 WASLO00401 505 aaPredicted RBP13.87□□□□□ -0.19
RACK1-234ENST00000515417 ADAMTS2O95450 1211 aa13.87□□□□□ -0.19
RACK1-234ENST00000515417 ADGRB2O60241 1585 aa13.87□□□□□ -0.19
RACK1-234ENST00000515417 FOXO3O43524 673 aa13.86□□□□□ -0.19
RACK1-234ENST00000515417 RALGAPBQ86X10 1494 aa13.86□□□□□ -0.19
RACK1-234ENST00000515417 NHSL1Q5SYE7 1610 aa13.86□□□□□ -0.19
RACK1-234ENST00000515417 GPRASP1Q5JY77 1395 aa13.85□□□□□ -0.19
RACK1-234ENST00000515417 PMFBP1Q8TBY8 1022 aa13.85□□□□□ -0.19
RACK1-234ENST00000515417 CARD11Q9BXL7 1154 aa13.85□□□□□ -0.19
RACK1-234ENST00000515417 CLSPNQ9HAW4 1339 aa13.85□□□□□ -0.19
RACK1-234ENST00000515417 USP32Q8NFA0 1604 aa13.84□□□□□ -0.19
RACK1-234ENST00000515417 CDK19Q9BWU1 502 aa13.84□□□□□ -0.19
RACK1-234ENST00000515417 PHF8Q9UPP1 1060 aa13.84□□□□□ -0.19
RACK1-234ENST00000515417 PNPLA6Q8IY17 1366 aa13.83□□□□□ -0.19
RACK1-234ENST00000515417 TULP4Q9NRJ4 1543 aa13.83□□□□□ -0.2
RACK1-234ENST00000515417 SOS2Q07890 1332 aaPredicted RBP13.83□□□□□ -0.2
RACK1-234ENST00000515417 NPHP3Q7Z494 1330 aa13.83□□□□□ -0.2
RACK1-234ENST00000515417 ANKARQ7Z5J8 1434 aa13.82□□□□□ -0.2
RACK1-234ENST00000515417 PXDNQ92626 1479 aa13.82□□□□□ -0.2
RACK1-234ENST00000515417 LRRC59Q96AG4 307 aaKnown RBP13.82□□□□□ -0.2
RACK1-234ENST00000515417 ATP7BP35670 1465 aa13.81□□□□□ -0.2
RACK1-234ENST00000515417 NUDT16Q96DE0 195 aaKnown RBP13.81□□□□□ -0.2
RACK1-234ENST00000515417 CABP2Q9NPB3 220 aa13.81□□□□□ -0.2
RACK1-234ENST00000515417 QRICH2Q9H0J4 1663 aa13.81□□□□□ -0.2
RACK1-234ENST00000515417 EIF3AQ14152 1382 aaKnown RBP13.81□□□□□ -0.2
RACK1-234ENST00000515417 RGPD8O14715 1765 aaPredicted RBP13.81□□□□□ -0.2
RACK1-234ENST00000515417 PLEKHG5O94827 1062 aa13.8□□□□□ -0.2
RACK1-234ENST00000515417 RBM6P78332 1123 aaKnown RBP13.8□□□□□ -0.2
RACK1-234ENST00000515417 SRPK2P78362 688 aaKnown RBP13.8□□□□□ -0.2
RACK1-234ENST00000515417 NGLY1Q96IV0 654 aa13.8□□□□□ -0.2
RACK1-234ENST00000515417 CDK12Q9NYV4 1490 aaPredicted RBP13.8□□□□□ -0.2
RACK1-234ENST00000515417 KRT28Q7Z3Y7 464 aa13.79□□□□□ -0.2
RACK1-234ENST00000515417 KIF1AQ12756 1690 aa13.79□□□□□ -0.2
RACK1-234ENST00000515417 NGDNQ8NEJ9 315 aaKnown RBP13.77□□□□□ -0.21
RACK1-234ENST00000515417 PSME1Q06323 249 aa13.76□□□□□ -0.21
RACK1-234ENST00000515417 LMOD2Q6P5Q4 547 aa13.76□□□□□ -0.21
RACK1-234ENST00000515417 USP21Q9UK80 565 aa13.76□□□□□ -0.21
RACK1-234ENST00000515417 SPATA31A3Q5VYP0 1347 aa13.75□□□□□ -0.21
RACK1-234ENST00000515417 EVC2Q86UK5 1308 aa13.75□□□□□ -0.21
RACK1-234ENST00000515417 TIMELESSQ9UNS1 1208 aa13.75□□□□□ -0.21
RACK1-234ENST00000515417 EP400Q96L91 3159 aa13.75□□□□□ -0.21
RACK1-234ENST00000515417 TNS3Q68CZ2 1445 aa13.74□□□□□ -0.21
RACK1-234ENST00000515417 USP47Q96K76 1375 aa13.74□□□□□ -0.21
RACK1-234ENST00000515417 ST20-MTHFSA0A0A6YYL1 179 aa13.74□□□□□ -0.21
RACK1-234ENST00000515417 CCDC61Q9Y6R9 512 aa13.74□□□□□ -0.21
RACK1-234ENST00000515417 PPIP5K1Q6PFW1 1433 aa13.73□□□□□ -0.21
RACK1-234ENST00000515417 TOPAZ1Q8N9V7 1692 aa13.73□□□□□ -0.21
RACK1-234ENST00000515417 ACEP12821 1306 aa13.73□□□□□ -0.21
RACK1-234ENST00000515417 PAK3O75914 559 aaPredicted RBP13.72□□□□□ -0.21
RACK1-234ENST00000515417 CABLES1Q8TDN4 633 aa13.72□□□□□ -0.21
RACK1-234ENST00000515417 CABP1Q9NZU7 370 aa13.72□□□□□ -0.21
RACK1-234ENST00000515417 SBNO1A3KN83 1393 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms