RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 ORAI2Q96SN7 254 aa33.68■■■□□ 2.98
CLDND1-230ENST00000514537 KDM2AQ9Y2K7 1162 aa33.68■■■□□ 2.98
CLDND1-230ENST00000514537 DDX17Q92841 729 aaKnown RBP33.67■■■□□ 2.98
CLDND1-230ENST00000514537 LRRC59Q96AG4 307 aaKnown RBP33.65■■■□□ 2.98
CLDND1-230ENST00000514537 KNDC1Q76NI1 1749 aa33.65■■■□□ 2.98
CLDND1-230ENST00000514537 LAMC1P11047 1609 aa33.63■■■□□ 2.97
CLDND1-230ENST00000514537 NHSL1Q5SYE7 1610 aa33.63■■■□□ 2.97
CLDND1-230ENST00000514537 CDC42BPGQ6DT37 1551 aa33.63■■■□□ 2.97
CLDND1-230ENST00000514537 SHPRHQ149N8 1683 aa33.58■■■□□ 2.97
CLDND1-230ENST00000514537 LRP6O75581 1613 aa33.57■■■□□ 2.97
CLDND1-230ENST00000514537 ESCO1Q5FWF5 840 aa33.57■■■□□ 2.96
CLDND1-230ENST00000514537 SOS2Q07890 1332 aaPredicted RBP33.56■■■□□ 2.96
CLDND1-230ENST00000514537 ADGRB1O14514 1584 aa33.55■■■□□ 2.96
CLDND1-230ENST00000514537 POTEAQ6S8J7 498 aa33.55■■■□□ 2.96
CLDND1-230ENST00000514537 PRAM1Q96QH2 718 aa33.55■■■□□ 2.96
CLDND1-230ENST00000514537 NUTM2FA1L443 756 aa33.53■■■□□ 2.96
CLDND1-230ENST00000514537 MEX3CQ5U5Q3 659 aaKnown RBP33.52■■■□□ 2.96
CLDND1-230ENST00000514537 DLC1Q96QB1 1528 aa33.52■■■□□ 2.96
CLDND1-230ENST00000514537 PNPLA6Q8IY17 1366 aa33.51■■■□□ 2.96
CLDND1-230ENST00000514537 NUTM2BA6NNL0 878 aaPredicted RBP33.51■■■□□ 2.95
CLDND1-230ENST00000514537 NUTM2EB1AL46 878 aaPredicted RBP33.51■■■□□ 2.95
CLDND1-230ENST00000514537 NUTM2AQ8IVF1 878 aaPredicted RBP33.51■■■□□ 2.95
CLDND1-230ENST00000514537 POGKQ9P215 609 aa33.5■■■□□ 2.95
CLDND1-230ENST00000514537 TRAK1Q9UPV9 953 aa33.5■■■□□ 2.95
CLDND1-230ENST00000514537 SAFB2Q14151 953 aaKnown RBP eCLIP33.49■■■□□ 2.95
CLDND1-230ENST00000514537 NPHP3Q7Z494 1330 aa33.48■■■□□ 2.95
CLDND1-230ENST00000514537 FOXO3O43524 673 aa33.46■■■□□ 2.95
CLDND1-230ENST00000514537 FMN2Q9NZ56 1722 aa33.42■■■□□ 2.94
CLDND1-230ENST00000514537 ZNF772Q68DY9 489 aaPredicted RBP33.4■■■□□ 2.94
CLDND1-230ENST00000514537 PXDNQ92626 1479 aa33.38■■■□□ 2.93
CLDND1-230ENST00000514537 XPCQ01831 940 aaPredicted RBP33.38■■■□□ 2.93
CLDND1-230ENST00000514537 SIN3AQ96ST3 1273 aa33.35■■■□□ 2.93
CLDND1-230ENST00000514537 PHF8Q9UPP1 1060 aa33.35■■■□□ 2.93
CLDND1-230ENST00000514537 MINK1Q8N4C8 1332 aaPredicted RBP33.34■■■□□ 2.93
CLDND1-230ENST00000514537 HIRIP3Q9BW71 556 aaPredicted RBP33.34■■■□□ 2.93
CLDND1-230ENST00000514537 L3MBTL2Q969R5 705 aa33.32■■■□□ 2.92
CLDND1-230ENST00000514537 AFF2P51816 1311 aa33.31■■■□□ 2.92
CLDND1-230ENST00000514537 ADGRB2O60241 1585 aa33.31■■■□□ 2.92
CLDND1-230ENST00000514537 ANKARQ7Z5J8 1434 aa33.3■■■□□ 2.92
CLDND1-230ENST00000514537 ADAMTS2O95450 1211 aa33.3■■■□□ 2.92
CLDND1-230ENST00000514537 NBPF1Q3BBV0 1214 aa33.3■■■□□ 2.92
CLDND1-230ENST00000514537 KRT28Q7Z3Y7 464 aa33.3■■■□□ 2.92
CLDND1-230ENST00000514537 C8orf37Q96NL8 207 aa33.3■■■□□ 2.92
CLDND1-230ENST00000514537 WASLO00401 505 aaPredicted RBP33.29■■■□□ 2.92
CLDND1-230ENST00000514537 TRIM26Q12899 539 aaPredicted RBP33.29■■■□□ 2.92
CLDND1-230ENST00000514537 KIF1AQ12756 1690 aa33.28■■■□□ 2.92
CLDND1-230ENST00000514537 SPATA31A3Q5VYP0 1347 aa33.27■■■□□ 2.92
CLDND1-230ENST00000514537 KIAA1210Q9ULL0 1709 aa33.26■■■□□ 2.92
CLDND1-230ENST00000514537 NEUROD1Q13562 356 aa33.26■■■□□ 2.91
CLDND1-230ENST00000514537 EIF3AQ14152 1382 aaKnown RBP33.25■■■□□ 2.91
CLDND1-230ENST00000514537 COL22A1Q8NFW1 1626 aaPredicted RBP33.25■■■□□ 2.91
CLDND1-230ENST00000514537 PSME1Q06323 249 aa33.24■■■□□ 2.91
CLDND1-230ENST00000514537 NGLY1Q96IV0 654 aa33.24■■■□□ 2.91
CLDND1-230ENST00000514537 PRR36Q9H6K5 1346 aa33.24■■■□□ 2.91
CLDND1-230ENST00000514537 PMFBP1Q8TBY8 1022 aa33.23■■■□□ 2.91
CLDND1-230ENST00000514537 RGPD8O14715 1765 aaPredicted RBP33.22■■■□□ 2.91
CLDND1-230ENST00000514537 USP32Q8NFA0 1604 aa33.21■■■□□ 2.91
CLDND1-230ENST00000514537 ARHGEF28Q8N1W1 1705 aaKnown RBP33.21■■■□□ 2.91
CLDND1-230ENST00000514537 RXRBP28702 533 aa33.2■■■□□ 2.91
CLDND1-230ENST00000514537 TULP4Q9NRJ4 1543 aa33.19■■■□□ 2.9
CLDND1-230ENST00000514537 SBNO1A3KN83 1393 aa33.18■■■□□ 2.9
CLDND1-230ENST00000514537 FNBP4Q8N3X1 1017 aaPredicted RBP33.17■■■□□ 2.9
CLDND1-230ENST00000514537 QTRT2Q9H974 415 aaKnown RBP33.17■■■□□ 2.9
CLDND1-230ENST00000514537 TNS3Q68CZ2 1445 aa33.14■■■□□ 2.9
CLDND1-230ENST00000514537 CDK19Q9BWU1 502 aa33.14■■■□□ 2.9
CLDND1-230ENST00000514537 NUDT16Q96DE0 195 aaKnown RBP33.13■■■□□ 2.89
CLDND1-230ENST00000514537 USP21Q9UK80 565 aa33.12■■■□□ 2.89
CLDND1-230ENST00000514537 RBM6P78332 1123 aaKnown RBP33.1■■■□□ 2.89
CLDND1-230ENST00000514537 ARHGEF10O15013 1369 aa33.09■■■□□ 2.89
CLDND1-230ENST00000514537 GPRASP1Q5JY77 1395 aa33.09■■■□□ 2.89
CLDND1-230ENST00000514537 CENPJQ9HC77 1338 aaPredicted RBP33.08■■■□□ 2.89
CLDND1-230ENST00000514537 ATP7BP35670 1465 aa33.08■■■□□ 2.89
CLDND1-230ENST00000514537 CDK12Q9NYV4 1490 aaPredicted RBP33.07■■■□□ 2.88
CLDND1-230ENST00000514537 LMOD2Q6P5Q4 547 aa33.07■■■□□ 2.88
CLDND1-230ENST00000514537 NGDNQ8NEJ9 315 aaKnown RBP33.07■■■□□ 2.88
CLDND1-230ENST00000514537 TRPC5Q9UL62 973 aaPredicted RBP33.06■■■□□ 2.88
CLDND1-230ENST00000514537 CABLES1Q8TDN4 633 aa33.05■■■□□ 2.88
CLDND1-230ENST00000514537 CCDC61Q9Y6R9 512 aa33.03■■■□□ 2.88
CLDND1-230ENST00000514537 BCL9LQ86UU0 1499 aa33.02■■■□□ 2.88
CLDND1-230ENST00000514537 NBPF8Q3BBV2 869 aa33.02■■■□□ 2.88
CLDND1-230ENST00000514537 ROCK2O75116 1388 aaKnown RBP33■■■□□ 2.87
CLDND1-230ENST00000514537 HAP1P54257 671 aaPredicted RBP33■■■□□ 2.87
CLDND1-230ENST00000514537 ATRNO75882 1429 aa33■■■□□ 2.87
CLDND1-230ENST00000514537 TRPM1Q7Z4N2 1603 aa32.99■■■□□ 2.87
CLDND1-230ENST00000514537 PLEKHG3A1L390 1219 aa32.99■■■□□ 2.87
CLDND1-230ENST00000514537 PLEKHG5O94827 1062 aa32.98■■■□□ 2.87
CLDND1-230ENST00000514537 TRPM3Q9HCF6 1732 aaPredicted RBP32.97■■■□□ 2.87
CLDND1-230ENST00000514537 SRPK2P78362 688 aaKnown RBP32.96■■■□□ 2.87
CLDND1-230ENST00000514537 MARF1Q9Y4F3 1742 aaKnown RBP32.96■■■□□ 2.87
CLDND1-230ENST00000514537 POLR3AO14802 1390 aaPredicted RBP32.96■■■□□ 2.87
CLDND1-230ENST00000514537 RGS12O14924 1447 aa32.95■■■□□ 2.87
CLDND1-230ENST00000514537 SLIT2O94813 1529 aa32.95■■■□□ 2.87
CLDND1-230ENST00000514537 TONSLQ96HA7 1378 aa32.95■■■□□ 2.86
CLDND1-230ENST00000514537 PAK3O75914 559 aaPredicted RBP32.94■■■□□ 2.86
CLDND1-230ENST00000514537 UNC5CLQ8IV45 518 aa32.94■■■□□ 2.86
CLDND1-230ENST00000514537 CABP2Q9NPB3 220 aa32.94■■■□□ 2.86
CLDND1-230ENST00000514537 ACEP12821 1306 aa32.94■■■□□ 2.86
CLDND1-230ENST00000514537 ITSN1Q15811 1721 aa32.93■■■□□ 2.86
CLDND1-230ENST00000514537 ALS2Q96Q42 1657 aa32.91■■■□□ 2.86
CLDND1-230ENST00000514537 GJD4Q96KN9 370 aaPredicted RBP32.9■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms