RNA–Protein interactions for RNA: ENST00000513858.5

SEC31A-237, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC31A, Length 3,687 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-237ENST00000513858 NRKQ7Z2Y5 1582 aa6.47□□□□□ -1.37
SEC31A-237ENST00000513858 ANKRD26Q9UPS8 1709 aa6.47□□□□□ -1.37
SEC31A-237ENST00000513858 ZNF326Q5BKZ1 582 aaKnown RBP6.46□□□□□ -1.37
SEC31A-237ENST00000513858 ZBTB12Q9Y330 459 aaPredicted RBP6.46□□□□□ -1.37
SEC31A-237ENST00000513858 TMEM2Q9UHN6 1383 aa6.46□□□□□ -1.37
SEC31A-237ENST00000513858 CHD2O14647 1828 aaKnown RBP6.46□□□□□ -1.38
SEC31A-237ENST00000513858 YTHDC2Q9H6S0 1430 aaKnown RBP6.46□□□□□ -1.38
SEC31A-237ENST00000513858 AKAP12Q02952 1782 aa6.45□□□□□ -1.38
SEC31A-237ENST00000513858 PTPRUQ92729 1446 aa6.45□□□□□ -1.38
SEC31A-237ENST00000513858 PARD3Q8TEW0 1356 aa6.45□□□□□ -1.38
SEC31A-237ENST00000513858 MON2Q7Z3U7 1717 aa6.45□□□□□ -1.38
SEC31A-237ENST00000513858 SHPRHQ149N8 1683 aa6.45□□□□□ -1.38
SEC31A-237ENST00000513858 METP08581 1390 aa6.44□□□□□ -1.38
SEC31A-237ENST00000513858 CENPBP07199 599 aaPredicted RBP6.44□□□□□ -1.38
SEC31A-237ENST00000513858 MARF1Q9Y4F3 1742 aaKnown RBP6.44□□□□□ -1.38
SEC31A-237ENST00000513858 CCDC184Q52MB2 194 aa6.44□□□□□ -1.38
SEC31A-237ENST00000513858 NWD1Q149M9 1564 aa6.43□□□□□ -1.38
SEC31A-237ENST00000513858 PLEKHG1Q9ULL1 1385 aa6.43□□□□□ -1.38
SEC31A-237ENST00000513858 NALCNQ8IZF0 1738 aa6.43□□□□□ -1.38
SEC31A-237ENST00000513858 PRKRIP1Q9H875 184 aaPredicted RBP6.43□□□□□ -1.38
SEC31A-237ENST00000513858 STRCP1A6NGW2 1772 aa6.43□□□□□ -1.38
SEC31A-237ENST00000513858 MLECQ14165 292 aa6.43□□□□□ -1.38
SEC31A-237ENST00000513858 CCER2I3L3R5 266 aa6.43□□□□□ -1.38
SEC31A-237ENST00000513858 RBM42Q9BTD8 480 aaKnown RBP6.43□□□□□ -1.38
SEC31A-237ENST00000513858 EIF3AQ14152 1382 aaKnown RBP6.42□□□□□ -1.38
SEC31A-237ENST00000513858 KIF20BQ96Q89 1820 aa6.42□□□□□ -1.38
SEC31A-237ENST00000513858 EIF5BO60841 1220 aaKnown RBP6.42□□□□□ -1.38
SEC31A-237ENST00000513858 CEBPAP49715 358 aaPredicted RBP6.42□□□□□ -1.38
SEC31A-237ENST00000513858 USP54Q70EL1 1684 aa6.42□□□□□ -1.38
SEC31A-237ENST00000513858 LTKP29376 864 aa6.42□□□□□ -1.38
SEC31A-237ENST00000513858 VGFO15240 615 aaPredicted RBP6.41□□□□□ -1.38
SEC31A-237ENST00000513858 NUTM2DQ5VT03 806 aaPredicted RBP6.41□□□□□ -1.38
SEC31A-237ENST00000513858 TMEM132EQ6IEE7 984 aa6.41□□□□□ -1.38
SEC31A-237ENST00000513858 LRPPRCP42704 1394 aaKnown RBP6.41□□□□□ -1.38
SEC31A-237ENST00000513858 ABCC11Q96J66 1382 aa6.41□□□□□ -1.38
SEC31A-237ENST00000513858 PLEKHH1Q9ULM0 1364 aa6.41□□□□□ -1.38
SEC31A-237ENST00000513858 FAM135BQ49AJ0 1406 aa6.41□□□□□ -1.38
SEC31A-237ENST00000513858 STRCQ7RTU9 1775 aa6.41□□□□□ -1.38
SEC31A-237ENST00000513858 RGPD8O14715 1765 aaPredicted RBP6.41□□□□□ -1.38
SEC31A-237ENST00000513858 PTCH1Q13635 1447 aa6.41□□□□□ -1.38
SEC31A-237ENST00000513858 NPC1L1Q9UHC9 1359 aa6.41□□□□□ -1.38
SEC31A-237ENST00000513858 FMN2Q9NZ56 1722 aa6.4□□□□□ -1.38
SEC31A-237ENST00000513858 XIRP1Q702N8 1843 aaKnown RBP6.4□□□□□ -1.38
SEC31A-237ENST00000513858 ATP7BP35670 1465 aa6.4□□□□□ -1.39
SEC31A-237ENST00000513858 SETD1BQ9UPS6 1966 aaKnown RBP6.4□□□□□ -1.39
SEC31A-237ENST00000513858 AMER1Q5JTC6 1135 aaPredicted RBP6.39□□□□□ -1.39
SEC31A-237ENST00000513858 KTN1Q86UP2 1357 aaKnown RBP6.39□□□□□ -1.39
SEC31A-237ENST00000513858 ROBO2Q9HCK4 1378 aa6.39□□□□□ -1.39
SEC31A-237ENST00000513858 CARD14Q9BXL6 1004 aa6.39□□□□□ -1.39
SEC31A-237ENST00000513858 CENPJQ9HC77 1338 aaPredicted RBP6.39□□□□□ -1.39
SEC31A-237ENST00000513858 CDC42BPGQ6DT37 1551 aa6.39□□□□□ -1.39
SEC31A-237ENST00000513858 ITSN1Q15811 1721 aa6.39□□□□□ -1.39
SEC31A-237ENST00000513858 PUS7Q96PZ0 661 aaKnown RBP6.39□□□□□ -1.39
SEC31A-237ENST00000513858 NKTRP30414 1462 aaKnown RBP6.38□□□□□ -1.39
SEC31A-237ENST00000513858 TMF1P82094 1093 aa6.38□□□□□ -1.39
SEC31A-237ENST00000513858 CPSF1Q10570 1443 aaKnown RBP6.38□□□□□ -1.39
SEC31A-237ENST00000513858 CHGAP10645 457 aaKnown RBP6.37□□□□□ -1.39
SEC31A-237ENST00000513858 SIRT1Q96EB6 747 aa6.37□□□□□ -1.39
SEC31A-237ENST00000513858 TRAK1Q9UPV9 953 aa6.37□□□□□ -1.39
SEC31A-237ENST00000513858 COL3A1P02461 1466 aaPredicted RBP6.37□□□□□ -1.39
SEC31A-237ENST00000513858 LMTK3Q96Q04 1460 aa6.37□□□□□ -1.39
SEC31A-237ENST00000513858 BLMP54132 1417 aaPredicted RBP6.36□□□□□ -1.39
SEC31A-237ENST00000513858 PANK3Q9H999 370 aa6.36□□□□□ -1.39
SEC31A-237ENST00000513858 A0A1W2PP64 1363 aa6.36□□□□□ -1.39
SEC31A-237ENST00000513858 ANKRD36BQ8N2N9 1353 aa6.36□□□□□ -1.39
SEC31A-237ENST00000513858 SSH2Q76I76 1423 aa6.35□□□□□ -1.39
SEC31A-237ENST00000513858 ANP32CO43423 234 aa6.35□□□□□ -1.39
SEC31A-237ENST00000513858 PIK3C2AO00443 1686 aa6.35□□□□□ -1.39
SEC31A-237ENST00000513858 INSRP06213 1382 aa6.35□□□□□ -1.39
SEC31A-237ENST00000513858 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.35□□□□□ -1.39
SEC31A-237ENST00000513858 NINLQ9Y2I6 1382 aa6.35□□□□□ -1.39
SEC31A-237ENST00000513858 PRAM1Q96QH2 718 aa6.35□□□□□ -1.39
SEC31A-237ENST00000513858 BRD4O60885 1362 aaPredicted RBP6.34□□□□□ -1.39
SEC31A-237ENST00000513858 ZNF692Q9BU19 519 aaPredicted RBP6.34□□□□□ -1.39
SEC31A-237ENST00000513858 PIK3R4Q99570 1358 aa6.34□□□□□ -1.39
SEC31A-237ENST00000513858 RGPD1P0DJD0 1748 aa6.34□□□□□ -1.4
SEC31A-237ENST00000513858 PEAK1Q9H792 1746 aa6.34□□□□□ -1.4
SEC31A-237ENST00000513858 TRPM3Q9HCF6 1732 aaPredicted RBP6.34□□□□□ -1.4
SEC31A-237ENST00000513858 PNISRQ8TF01 805 aaKnown RBP6.34□□□□□ -1.4
SEC31A-237ENST00000513858 CRYBG1Q9Y4K1 1723 aa6.33□□□□□ -1.4
SEC31A-237ENST00000513858 MYBBP1AQ9BQG0 1328 aaKnown RBP6.33□□□□□ -1.4
SEC31A-237ENST00000513858 SMG6Q86US8 1419 aaKnown RBP6.33□□□□□ -1.4
SEC31A-237ENST00000513858 NSD3Q9BZ95 1437 aa6.33□□□□□ -1.4
SEC31A-237ENST00000513858 LRRC7Q96NW7 1537 aa6.33□□□□□ -1.4
SEC31A-237ENST00000513858 WAPLQ7Z5K2 1190 aa6.33□□□□□ -1.4
SEC31A-237ENST00000513858 REM2Q8IYK8 340 aaPredicted RBP6.33□□□□□ -1.4
SEC31A-237ENST00000513858 AKT1S1Q96B36 256 aa6.33□□□□□ -1.4
SEC31A-237ENST00000513858 PRR36Q9H6K5 1346 aa6.33□□□□□ -1.4
SEC31A-237ENST00000513858 KDM4FA0A1W2PPD8 638 aa6.33□□□□□ -1.4
SEC31A-237ENST00000513858 SPDYE2BA6NHP3 402 aa6.33□□□□□ -1.4
SEC31A-237ENST00000513858 SPDYE6P0CI01 402 aa6.33□□□□□ -1.4
SEC31A-237ENST00000513858 SPDYE2Q495Y8 402 aa6.33□□□□□ -1.4
SEC31A-237ENST00000513858 IQSEC2Q5JU85 1478 aa6.33□□□□□ -1.4
SEC31A-237ENST00000513858 TBX22Q9Y458 520 aa6.32□□□□□ -1.4
SEC31A-237ENST00000513858 PHRF1Q9P1Y6 1649 aaKnown RBP6.32□□□□□ -1.4
SEC31A-237ENST00000513858 RALBP1Q15311 655 aa6.32□□□□□ -1.4
SEC31A-237ENST00000513858 SLC12A5Q9H2X9 1139 aa6.32□□□□□ -1.4
SEC31A-237ENST00000513858 MAP2P11137 1827 aaKnown RBP6.31□□□□□ -1.4
SEC31A-237ENST00000513858 CABP2Q9NPB3 220 aa6.31□□□□□ -1.4
SEC31A-237ENST00000513858 EVC2Q86UK5 1308 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms