RNA–Protein interactions for RNA: ENST00000513101.1

ACSF2-223, Transcript of acyl-CoA synthetase family member 2, human

TSL 4

Gene ACSF2, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSF2-223	ENST00000513101	NBPF1	Q3BBV0	1214 aa		12.51	□□□□□ -0.41
ACSF2-223	ENST00000513101	PRAM1	Q96QH2	718 aa		12.51	□□□□□ -0.41
ACSF2-223	ENST00000513101	POGK	Q9P215	609 aa		12.51	□□□□□ -0.41
ACSF2-223	ENST00000513101	PLEKHH1	Q9ULM0	1364 aa		12.51	□□□□□ -0.41
ACSF2-223	ENST00000513101	DLC1	Q96QB1	1528 aa		12.51	□□□□□ -0.41
ACSF2-223	ENST00000513101	MED1	Q15648	1581 aa	Predicted RBP	12.51	□□□□□ -0.41
ACSF2-223	ENST00000513101	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	12.49	□□□□□ -0.41
ACSF2-223	ENST00000513101	MST1R	Q04912	1400 aa		12.49	□□□□□ -0.41
ACSF2-223	ENST00000513101	BRINP3	Q76B58	766 aa		12.49	□□□□□ -0.41
ACSF2-223	ENST00000513101	NBPF8	Q3BBV2	869 aa		12.48	□□□□□ -0.41
ACSF2-223	ENST00000513101	KNDC1	Q76NI1	1749 aa		12.48	□□□□□ -0.41
ACSF2-223	ENST00000513101	C1orf167	Q5SNV9	1468 aa		12.46	□□□□□ -0.41
ACSF2-223	ENST00000513101	KIAA1210	Q9ULL0	1709 aa		12.46	□□□□□ -0.41
ACSF2-223	ENST00000513101	SAFB2	Q14151	953 aa	Known RBP eCLIP	12.46	□□□□□ -0.41
ACSF2-223	ENST00000513101	ROCK2	O75116	1388 aa	Known RBP	12.44	□□□□□ -0.42
ACSF2-223	ENST00000513101	GPRASP1	Q5JY77	1395 aa		12.44	□□□□□ -0.42
ACSF2-223	ENST00000513101	CDC42BPG	Q6DT37	1551 aa		12.44	□□□□□ -0.42
ACSF2-223	ENST00000513101	ORAI2	Q96SN7	254 aa		12.44	□□□□□ -0.42
ACSF2-223	ENST00000513101	NALCN	Q8IZF0	1738 aa		12.44	□□□□□ -0.42
ACSF2-223	ENST00000513101	ROBO1	Q9Y6N7	1651 aa		12.43	□□□□□ -0.42
ACSF2-223	ENST00000513101	WASL	O00401	505 aa	Predicted RBP	12.43	□□□□□ -0.42
ACSF2-223	ENST00000513101	MINK1	Q8N4C8	1332 aa	Predicted RBP	12.42	□□□□□ -0.42
ACSF2-223	ENST00000513101	CENPJ	Q9HC77	1338 aa	Predicted RBP	12.42	□□□□□ -0.42
ACSF2-223	ENST00000513101	ESCO1	Q5FWF5	840 aa		12.42	□□□□□ -0.42
ACSF2-223	ENST00000513101	NUTM2F	A1L443	756 aa		12.41	□□□□□ -0.42
ACSF2-223	ENST00000513101	HIRIP3	Q9BW71	556 aa	Predicted RBP	12.41	□□□□□ -0.42
ACSF2-223	ENST00000513101	CARD11	Q9BXL7	1154 aa		12.41	□□□□□ -0.42
ACSF2-223	ENST00000513101	EIF3A	Q14152	1382 aa	Known RBP	12.41	□□□□□ -0.42
ACSF2-223	ENST00000513101	LRRC59	Q96AG4	307 aa	Known RBP	12.4	□□□□□ -0.42
ACSF2-223	ENST00000513101	AHDC1	Q5TGY3	1603 aa	Predicted RBP	12.4	□□□□□ -0.42
ACSF2-223	ENST00000513101	RALGAPB	Q86X10	1494 aa		12.4	□□□□□ -0.43
ACSF2-223	ENST00000513101	SOS2	Q07890	1332 aa	Predicted RBP	12.39	□□□□□ -0.43
ACSF2-223	ENST00000513101	NPHP3	Q7Z494	1330 aa		12.39	□□□□□ -0.43
ACSF2-223	ENST00000513101	ANKAR	Q7Z5J8	1434 aa		12.39	□□□□□ -0.43
ACSF2-223	ENST00000513101	TRPM1	Q7Z4N2	1603 aa		12.39	□□□□□ -0.43
ACSF2-223	ENST00000513101	JCAD	Q9P266	1359 aa		12.39	□□□□□ -0.43
ACSF2-223	ENST00000513101	ADGRB2	O60241	1585 aa		12.39	□□□□□ -0.43
ACSF2-223	ENST00000513101	CDK19	Q9BWU1	502 aa		12.38	□□□□□ -0.43
ACSF2-223	ENST00000513101	PHF8	Q9UPP1	1060 aa		12.38	□□□□□ -0.43
ACSF2-223	ENST00000513101	ZNF316	A6NFI3	1004 aa	Predicted RBP	12.37	□□□□□ -0.43
ACSF2-223	ENST00000513101	FOXO3	O43524	673 aa		12.37	□□□□□ -0.43
ACSF2-223	ENST00000513101	DDX17	Q92841	729 aa	Known RBP	12.37	□□□□□ -0.43
ACSF2-223	ENST00000513101	PRR36	Q9H6K5	1346 aa		12.37	□□□□□ -0.43
ACSF2-223	ENST00000513101	NUDT16	Q96DE0	195 aa	Known RBP	12.36	□□□□□ -0.43
ACSF2-223	ENST00000513101	ARHGEF28	Q8N1W1	1705 aa	Known RBP	12.36	□□□□□ -0.43
ACSF2-223	ENST00000513101	FMN2	Q9NZ56	1722 aa		12.35	□□□□□ -0.43
ACSF2-223	ENST00000513101	SLC24A1	O60721	1099 aa		12.35	□□□□□ -0.43
ACSF2-223	ENST00000513101	CCDC61	Q9Y6R9	512 aa		12.35	□□□□□ -0.43
ACSF2-223	ENST00000513101	SPATA31A6	Q5VVP1	1343 aa		12.35	□□□□□ -0.43
ACSF2-223	ENST00000513101	COL16A1	Q07092	1604 aa	Predicted RBP	12.34	□□□□□ -0.43
ACSF2-223	ENST00000513101	SBNO2	Q9Y2G9	1366 aa		12.34	□□□□□ -0.43
ACSF2-223	ENST00000513101	TULP4	Q9NRJ4	1543 aa		12.34	□□□□□ -0.43
ACSF2-223	ENST00000513101	KRT28	Q7Z3Y7	464 aa		12.34	□□□□□ -0.43
ACSF2-223	ENST00000513101	EVC2	Q86UK5	1308 aa		12.34	□□□□□ -0.43
ACSF2-223	ENST00000513101	PHLPP1	O60346	1717 aa		12.34	□□□□□ -0.43
ACSF2-223	ENST00000513101	SRPK2	P78362	688 aa	Known RBP	12.33	□□□□□ -0.44
ACSF2-223	ENST00000513101	PSME1	Q06323	249 aa		12.33	□□□□□ -0.44
ACSF2-223	ENST00000513101	PMFBP1	Q8TBY8	1022 aa		12.33	□□□□□ -0.44
ACSF2-223	ENST00000513101	NHSL1	Q5SYE7	1610 aa		12.33	□□□□□ -0.44
ACSF2-223	ENST00000513101	PLEKHG3	A1L390	1219 aa		12.32	□□□□□ -0.44
ACSF2-223	ENST00000513101	ADRA2B	P18089	450 aa		12.32	□□□□□ -0.44
ACSF2-223	ENST00000513101	ST20-MTHFS	A0A0A6YYL1	179 aa		12.31	□□□□□ -0.44
ACSF2-223	ENST00000513101	NGDN	Q8NEJ9	315 aa	Known RBP	12.31	□□□□□ -0.44
ACSF2-223	ENST00000513101	PUS7	Q96PZ0	661 aa	Known RBP	12.31	□□□□□ -0.44
ACSF2-223	ENST00000513101	CABP2	Q9NPB3	220 aa		12.31	□□□□□ -0.44
ACSF2-223	ENST00000513101	ATP7B	P35670	1465 aa		12.31	□□□□□ -0.44
ACSF2-223	ENST00000513101	SPATA31A3	Q5VYP0	1347 aa		12.31	□□□□□ -0.44
ACSF2-223	ENST00000513101	PNPLA6	Q8IY17	1366 aa		12.3	□□□□□ -0.44
ACSF2-223	ENST00000513101	PXDN	Q92626	1479 aa		12.3	□□□□□ -0.44
ACSF2-223	ENST00000513101	XPC	Q01831	940 aa	Predicted RBP	12.3	□□□□□ -0.44
ACSF2-223	ENST00000513101	SBNO1	A3KN83	1393 aa		12.3	□□□□□ -0.44
ACSF2-223	ENST00000513101	KIF1A	Q12756	1690 aa		12.29	□□□□□ -0.44
ACSF2-223	ENST00000513101	TESK2	Q96S53	571 aa		12.29	□□□□□ -0.44
ACSF2-223	ENST00000513101	USP32	Q8NFA0	1604 aa		12.29	□□□□□ -0.44
ACSF2-223	ENST00000513101	POLR3A	O14802	1390 aa	Predicted RBP	12.29	□□□□□ -0.44
ACSF2-223	ENST00000513101	CABP1	Q9NZU7	370 aa		12.28	□□□□□ -0.44
ACSF2-223	ENST00000513101	ACE	P12821	1306 aa		12.28	□□□□□ -0.44
ACSF2-223	ENST00000513101	USP47	Q96K76	1375 aa		12.28	□□□□□ -0.44
ACSF2-223	ENST00000513101	ATAD2	Q6PL18	1390 aa		12.27	□□□□□ -0.45
ACSF2-223	ENST00000513101	NUTM2B	A6NNL0	878 aa	Predicted RBP	12.26	□□□□□ -0.45
ACSF2-223	ENST00000513101	NUTM2E	B1AL46	878 aa	Predicted RBP	12.26	□□□□□ -0.45
ACSF2-223	ENST00000513101	NUTM2A	Q8IVF1	878 aa	Predicted RBP	12.26	□□□□□ -0.45
ACSF2-223	ENST00000513101	BRD4	O60885	1362 aa	Predicted RBP	12.26	□□□□□ -0.45
ACSF2-223	ENST00000513101	TNS3	Q68CZ2	1445 aa		12.26	□□□□□ -0.45
ACSF2-223	ENST00000513101	PPIP5K1	Q6PFW1	1433 aa		12.26	□□□□□ -0.45
ACSF2-223	ENST00000513101	SHPRH	Q149N8	1683 aa		12.26	□□□□□ -0.45
ACSF2-223	ENST00000513101	QRICH2	Q9H0J4	1663 aa		12.26	□□□□□ -0.45
ACSF2-223	ENST00000513101	ZNF692	Q9BU19	519 aa	Predicted RBP	12.25	□□□□□ -0.45
ACSF2-223	ENST00000513101	ARHGEF10	O15013	1369 aa		12.25	□□□□□ -0.45
ACSF2-223	ENST00000513101	EIF4G2	P78344	907 aa	Known RBP eCLIP	12.24	□□□□□ -0.45
ACSF2-223	ENST00000513101	TMF1	P82094	1093 aa		12.24	□□□□□ -0.45
ACSF2-223	ENST00000513101	MEX3C	Q5U5Q3	659 aa	Known RBP	12.24	□□□□□ -0.45
ACSF2-223	ENST00000513101	LRP6	O75581	1613 aa		12.23	□□□□□ -0.45
ACSF2-223	ENST00000513101	LMOD2	Q6P5Q4	547 aa		12.23	□□□□□ -0.45
ACSF2-223	ENST00000513101	RGS17	Q9UGC6	210 aa	Predicted RBP	12.23	□□□□□ -0.45
ACSF2-223	ENST00000513101	RGPD8	O14715	1765 aa	Predicted RBP	12.23	□□□□□ -0.45
ACSF2-223	ENST00000513101	PAK3	O75914	559 aa	Predicted RBP	12.22	□□□□□ -0.45
ACSF2-223	ENST00000513101	CDCA8	Q53HL2	280 aa		12.22	□□□□□ -0.45
ACSF2-223	ENST00000513101	ITSN1	Q15811	1721 aa		12.21	□□□□□ -0.45
ACSF2-223	ENST00000513101	CPSF1	Q10570	1443 aa	Known RBP	12.2	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms