RNA–Protein interactions for RNA: ENST00000512853.5

SNX25-205, Transcript of sorting nexin 25, humanhuman

TSL 1 (best)

Gene SNX25, Length 1,937 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-205ENST00000512853 KIDINS220Q9ULH0 1771 aa14.92□□□□□ -0.02
SNX25-205ENST00000512853 NSD3Q9BZ95 1437 aa14.92□□□□□ -0.02
SNX25-205ENST00000512853 FRAT1Q92837 279 aaPredicted RBP14.92□□□□□ -0.02
SNX25-205ENST00000512853 PHF23Q9BUL5 403 aaPredicted RBP14.92□□□□□ -0.02
SNX25-205ENST00000512853 ADGRB1O14514 1584 aa14.91□□□□□ -0.02
SNX25-205ENST00000512853 ADGRL1O94910 1474 aa14.91□□□□□ -0.02
SNX25-205ENST00000512853 ADGRB2O60241 1585 aa14.9□□□□□ -0.02
SNX25-205ENST00000512853 ZNF518AQ6AHZ1 1483 aa14.89□□□□□ -0.03
SNX25-205ENST00000512853 KIF3BO15066 747 aa14.89□□□□□ -0.03
SNX25-205ENST00000512853 NOS1P29475 1434 aa14.89□□□□□ -0.03
SNX25-205ENST00000512853 NCBP3Q53F19 620 aaKnown RBP14.88□□□□□ -0.03
SNX25-205ENST00000512853 RUNDC1Q96C34 613 aa14.88□□□□□ -0.03
SNX25-205ENST00000512853 FRAT2O75474 233 aaPredicted RBP14.88□□□□□ -0.03
SNX25-205ENST00000512853 PANK1Q8TE04 598 aa14.88□□□□□ -0.03
SNX25-205ENST00000512853 BRPF3Q9ULD4 1205 aa14.88□□□□□ -0.03
SNX25-205ENST00000512853 RARSP54136 660 aaKnown RBP14.87□□□□□ -0.03
SNX25-205ENST00000512853 PMFBP1Q8TBY8 1022 aa14.87□□□□□ -0.03
SNX25-205ENST00000512853 COG6Q9Y2V7 657 aa14.87□□□□□ -0.03
SNX25-205ENST00000512853 CANXP27824 592 aaKnown RBP14.86□□□□□ -0.03
SNX25-205ENST00000512853 CCDC27Q2M243 656 aa14.86□□□□□ -0.03
SNX25-205ENST00000512853 WDR63Q8IWG1 891 aa14.86□□□□□ -0.03
SNX25-205ENST00000512853 RTN4Q9NQC3 1192 aaKnown RBP14.86□□□□□ -0.03
SNX25-205ENST00000512853 MORC1Q86VD1 984 aa14.85□□□□□ -0.03
SNX25-205ENST00000512853 BECN1Q14457 450 aa14.84□□□□□ -0.03
SNX25-205ENST00000512853 HECW2Q9P2P5 1572 aa14.84□□□□□ -0.03
SNX25-205ENST00000512853 ARHGEF28Q8N1W1 1705 aaKnown RBP14.84□□□□□ -0.03
SNX25-205ENST00000512853 NSD2O96028 1365 aa14.84□□□□□ -0.03
SNX25-205ENST00000512853 GLI2P10070 1586 aa14.83□□□□□ -0.04
SNX25-205ENST00000512853 SEC24BO95487 1268 aa14.83□□□□□ -0.04
SNX25-205ENST00000512853 TCP11L2Q8N4U5 519 aa14.82□□□□□ -0.04
SNX25-205ENST00000512853 TULP4Q9NRJ4 1543 aa14.82□□□□□ -0.04
SNX25-205ENST00000512853 PUS7Q96PZ0 661 aaKnown RBP14.82□□□□□ -0.04
SNX25-205ENST00000512853 C14orf93Q9H972 538 aaKnown RBP14.82□□□□□ -0.04
SNX25-205ENST00000512853 ANO8Q9HCE9 1232 aaPredicted RBP14.82□□□□□ -0.04
SNX25-205ENST00000512853 FRMPD1Q5SYB0 1578 aa14.81□□□□□ -0.04
SNX25-205ENST00000512853 PCDHB15Q9Y5E8 787 aa14.81□□□□□ -0.04
SNX25-205ENST00000512853 NPATQ14207 1427 aa14.81□□□□□ -0.04
SNX25-205ENST00000512853 PIK3C2BO00750 1634 aa14.81□□□□□ -0.04
SNX25-205ENST00000512853 CFAP74Q9C0B2 1584 aa14.8□□□□□ -0.04
SNX25-205ENST00000512853 RLBP1P12271 317 aa14.8□□□□□ -0.04
SNX25-205ENST00000512853 TBC1D32Q96NH3 1257 aa14.8□□□□□ -0.04
SNX25-205ENST00000512853 CAMSAP1Q5T5Y3 1602 aa14.8□□□□□ -0.04
SNX25-205ENST00000512853 CFAP53Q96M91 514 aa14.79□□□□□ -0.04
SNX25-205ENST00000512853 ANTXR1Q9H6X2 564 aa14.79□□□□□ -0.04
SNX25-205ENST00000512853 PDZRN3Q9UPQ7 1066 aa14.79□□□□□ -0.04
SNX25-205ENST00000512853 RRP7AQ9Y3A4 280 aaKnown RBP14.79□□□□□ -0.04
SNX25-205ENST00000512853 ANKRD36BQ8N2N9 1353 aa14.79□□□□□ -0.04
SNX25-205ENST00000512853 RPGRIP1LQ68CZ1 1315 aa14.79□□□□□ -0.04
SNX25-205ENST00000512853 ANKRD26Q9UPS8 1709 aa14.78□□□□□ -0.04
SNX25-205ENST00000512853 SLC12A5Q9H2X9 1139 aa14.78□□□□□ -0.04
SNX25-205ENST00000512853 MYH16Q9H6N6 1097 aa14.78□□□□□ -0.04
SNX25-205ENST00000512853 TNNQ9UQP3 1299 aa14.78□□□□□ -0.04
SNX25-205ENST00000512853 ABCC3O15438 1527 aa14.77□□□□□ -0.04
SNX25-205ENST00000512853 CT47B1P0C2W7 299 aaPredicted RBP14.77□□□□□ -0.04
SNX25-205ENST00000512853 RWDD1Q9H446 243 aaPredicted RBP14.77□□□□□ -0.04
SNX25-205ENST00000512853 TRAK1Q9UPV9 953 aa14.77□□□□□ -0.04
SNX25-205ENST00000512853 MTHFSP49914 203 aa14.76□□□□□ -0.05
SNX25-205ENST00000512853 UPF2Q9HAU5 1272 aaKnown RBP14.76□□□□□ -0.05
SNX25-205ENST00000512853 NEXMIFQ5QGS0 1516 aa14.76□□□□□ -0.05
SNX25-205ENST00000512853 ASXL2Q76L83 1435 aa14.76□□□□□ -0.05
SNX25-205ENST00000512853 COL3A1P02461 1466 aaPredicted RBP14.76□□□□□ -0.05
SNX25-205ENST00000512853 MVPQ14764 893 aaKnown RBP14.76□□□□□ -0.05
SNX25-205ENST00000512853 MLH3Q9UHC1 1453 aa14.75□□□□□ -0.05
SNX25-205ENST00000512853 NEUROD2Q15784 382 aa14.75□□□□□ -0.05
SNX25-205ENST00000512853 SIGLEC1Q9BZZ2 1709 aa14.75□□□□□ -0.05
SNX25-205ENST00000512853 POGZQ7Z3K3 1410 aa14.74□□□□□ -0.05
SNX25-205ENST00000512853 TNNT2P45379 298 aaPredicted RBP14.74□□□□□ -0.05
SNX25-205ENST00000512853 FAM43AQ8N2R8 423 aa14.74□□□□□ -0.05
SNX25-205ENST00000512853 ZKSCAN2Q63HK3 967 aa14.73□□□□□ -0.05
SNX25-205ENST00000512853 TBC1D2Q9BYX2 928 aa14.73□□□□□ -0.05
SNX25-205ENST00000512853 POGKQ9P215 609 aa14.73□□□□□ -0.05
SNX25-205ENST00000512853 EVC2Q86UK5 1308 aa14.73□□□□□ -0.05
SNX25-205ENST00000512853 CFAP65Q6ZU64 1925 aaKnown RBP14.73□□□□□ -0.05
SNX25-205ENST00000512853 CLTCQ00610 1675 aaKnown RBP14.73□□□□□ -0.05
SNX25-205ENST00000512853 BCL2L13Q9BXK5 485 aa14.72□□□□□ -0.05
SNX25-205ENST00000512853 ABCC11Q96J66 1382 aa14.72□□□□□ -0.05
SNX25-205ENST00000512853 CD109Q6YHK3 1445 aa14.71□□□□□ -0.05
SNX25-205ENST00000512853 MED14O60244 1454 aa14.71□□□□□ -0.05
SNX25-205ENST00000512853 DZIP1LQ8IYY4 767 aaKnown RBP14.71□□□□□ -0.05
SNX25-205ENST00000512853 SLKQ9H2G2 1235 aaPredicted RBP14.71□□□□□ -0.05
SNX25-205ENST00000512853 CHGAP10645 457 aaKnown RBP14.7□□□□□ -0.06
SNX25-205ENST00000512853 HDAC1Q13547 482 aaPredicted RBP14.7□□□□□ -0.06
SNX25-205ENST00000512853 L1TD1Q5T7N2 865 aaKnown RBP14.7□□□□□ -0.06
SNX25-205ENST00000512853 IL16Q14005 1332 aa14.7□□□□□ -0.06
SNX25-205ENST00000512853 U2AF1L5P0DN76 240 aaPredicted RBP14.69□□□□□ -0.06
SNX25-205ENST00000512853 U2AF1Q01081 240 aaKnown RBP eCLIP14.69□□□□□ -0.06
SNX25-205ENST00000512853 TMEM132EQ6IEE7 984 aa14.69□□□□□ -0.06
SNX25-205ENST00000512853 ZFYVE9O95405 1425 aa14.69□□□□□ -0.06
SNX25-205ENST00000512853 CDC42BPGQ6DT37 1551 aa14.68□□□□□ -0.06
SNX25-205ENST00000512853 FTSJ3Q8IY81 847 aaKnown RBP14.68□□□□□ -0.06
SNX25-205ENST00000512853 PLEKHF1Q96S99 279 aa14.68□□□□□ -0.06
SNX25-205ENST00000512853 A0A1W2PP64 1363 aa14.67□□□□□ -0.06
SNX25-205ENST00000512853 DDX19BQ9UMR2 479 aa14.66□□□□□ -0.06
SNX25-205ENST00000512853 KIF20BQ96Q89 1820 aa14.66□□□□□ -0.06
SNX25-205ENST00000512853 SMC5Q8IY18 1101 aa14.66□□□□□ -0.06
SNX25-205ENST00000512853 SMC4Q9NTJ3 1288 aa14.66□□□□□ -0.06
SNX25-205ENST00000512853 ARHGAP31Q2M1Z3 1444 aa14.66□□□□□ -0.06
SNX25-205ENST00000512853 TRIM27P14373 513 aa14.65□□□□□ -0.06
SNX25-205ENST00000512853 TMPOP42166 694 aaKnown RBP14.65□□□□□ -0.06
SNX25-205ENST00000512853 EXOSC9Q06265 439 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms