RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 MARSP56192 900 aaKnown RBP8.39□□□□□ -1.07
TRAPPC11-209ENST00000512476 HDLBPQ00341 1268 aaKnown RBP8.39□□□□□ -1.07
TRAPPC11-209ENST00000512476 RAD51AP2Q09MP3 1159 aa8.39□□□□□ -1.07
TRAPPC11-209ENST00000512476 CLEC4GQ6UXB4 293 aa8.39□□□□□ -1.07
TRAPPC11-209ENST00000512476 OSCARQ8IYS5 282 aa8.39□□□□□ -1.07
TRAPPC11-209ENST00000512476 STK32AQ8WU08 396 aa8.39□□□□□ -1.07
TRAPPC11-209ENST00000512476 PIK3R5Q8WYR1 880 aa8.39□□□□□ -1.07
TRAPPC11-209ENST00000512476 BEGAINQ9BUH8 593 aa8.39□□□□□ -1.07
TRAPPC11-209ENST00000512476 MYSM1Q5VVJ2 828 aa8.38□□□□□ -1.07
TRAPPC11-209ENST00000512476 RPUSD2Q8IZ73 545 aaKnown RBP8.38□□□□□ -1.07
TRAPPC11-209ENST00000512476 EMILIN3Q9NT22 766 aa8.38□□□□□ -1.07
TRAPPC11-209ENST00000512476 CCER2I3L3R5 266 aa8.38□□□□□ -1.07
TRAPPC11-209ENST00000512476 C11orf96Q7Z7L8 435 aa8.38□□□□□ -1.07
TRAPPC11-209ENST00000512476 JAZF1Q86VZ6 243 aa8.38□□□□□ -1.07
TRAPPC11-209ENST00000512476 UNC13AQ9UPW8 1703 aa8.38□□□□□ -1.07
TRAPPC11-209ENST00000512476 GTF2F1P35269 517 aaKnown RBP eCLIP8.37□□□□□ -1.07
TRAPPC11-209ENST00000512476 KRBA2Q6ZNG9 492 aa8.37□□□□□ -1.07
TRAPPC11-209ENST00000512476 NLRP7Q8WX94 980 aa8.37□□□□□ -1.07
TRAPPC11-209ENST00000512476 UBA5Q9GZZ9 404 aa8.37□□□□□ -1.07
TRAPPC11-209ENST00000512476 TFIP11Q9UBB9 837 aaKnown RBP8.37□□□□□ -1.07
TRAPPC11-209ENST00000512476 HELBQ8NG08 1087 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC11-209ENST00000512476 PHF8Q9UPP1 1060 aa8.37□□□□□ -1.07
TRAPPC11-209ENST00000512476 EVA1CP58658 441 aa8.36□□□□□ -1.07
TRAPPC11-209ENST00000512476 LDLRAD1Q5T700 205 aa8.36□□□□□ -1.07
TRAPPC11-209ENST00000512476 CCDC181Q5TID7 509 aa8.36□□□□□ -1.07
TRAPPC11-209ENST00000512476 VAMP1P23763 118 aa8.36□□□□□ -1.07
TRAPPC11-209ENST00000512476 TSHZ1Q6ZSZ6 1077 aa8.36□□□□□ -1.07
TRAPPC11-209ENST00000512476 FBXO33Q7Z6M2 555 aa8.36□□□□□ -1.07
TRAPPC11-209ENST00000512476 CCDC146Q8IYE0 955 aa8.36□□□□□ -1.07
TRAPPC11-209ENST00000512476 TMEM164Q5U3C3 297 aa8.35□□□□□ -1.07
TRAPPC11-209ENST00000512476 CCER1Q8TC90 406 aaPredicted RBP8.35□□□□□ -1.07
TRAPPC11-209ENST00000512476 PRKAG2Q9UGJ0 569 aa8.35□□□□□ -1.07
TRAPPC11-209ENST00000512476 ZMIZ1Q9ULJ6 1067 aa8.35□□□□□ -1.07
TRAPPC11-209ENST00000512476 GRXCR2A6NFK2 248 aa8.34□□□□□ -1.07
TRAPPC11-209ENST00000512476 ATG7O95352 703 aa8.34□□□□□ -1.07
TRAPPC11-209ENST00000512476 ERCC3P19447 782 aa8.34□□□□□ -1.07
TRAPPC11-209ENST00000512476 PDE4AP27815 886 aa8.34□□□□□ -1.07
TRAPPC11-209ENST00000512476 CCDC184Q52MB2 194 aa8.34□□□□□ -1.07
TRAPPC11-209ENST00000512476 PMFBP1Q8TBY8 1022 aa8.34□□□□□ -1.07
TRAPPC11-209ENST00000512476 TMUB1Q9BVT8 246 aa8.34□□□□□ -1.07
TRAPPC11-209ENST00000512476 MAGEC2Q9UBF1 373 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC11-209ENST00000512476 SOWAHDA6NJG2 315 aa8.34□□□□□ -1.07
TRAPPC11-209ENST00000512476 GPR37L1O60883 481 aa8.34□□□□□ -1.07
TRAPPC11-209ENST00000512476 MDM2Q00987 491 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC11-209ENST00000512476 BANK1Q8NDB2 785 aa8.33□□□□□ -1.08
TRAPPC11-209ENST00000512476 IRF2BPLQ9H1B7 796 aa8.33□□□□□ -1.08
TRAPPC11-209ENST00000512476 GNL3LQ9NVN8 582 aaKnown RBP8.33□□□□□ -1.08
TRAPPC11-209ENST00000512476 CCDC189A1A4V9 331 aa8.33□□□□□ -1.08
TRAPPC11-209ENST00000512476 HOXA2O43364 376 aa8.33□□□□□ -1.08
TRAPPC11-209ENST00000512476 SSTR3P32745 418 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC11-209ENST00000512476 TBX4P57082 545 aa8.33□□□□□ -1.08
TRAPPC11-209ENST00000512476 BMS1Q14692 1282 aaKnown RBP8.33□□□□□ -1.08
TRAPPC11-209ENST00000512476 PLEKHG6Q3KR16 790 aa8.33□□□□□ -1.08
TRAPPC11-209ENST00000512476 TINF2Q9BSI4 451 aa8.33□□□□□ -1.08
TRAPPC11-209ENST00000512476 ZSWIM4Q9H7M6 989 aa8.33□□□□□ -1.08
TRAPPC11-209ENST00000512476 NOP58Q9Y2X3 529 aaKnown RBP8.33□□□□□ -1.08
TRAPPC11-209ENST00000512476 MRPL42Q9Y6G3 142 aaKnown RBP8.33□□□□□ -1.08
TRAPPC11-209ENST00000512476 TNNI2P48788 182 aa8.32□□□□□ -1.08
TRAPPC11-209ENST00000512476 PDAP1Q13442 181 aaKnown RBP8.32□□□□□ -1.08
TRAPPC11-209ENST00000512476 BDNFP23560 247 aa8.32□□□□□ -1.08
TRAPPC11-209ENST00000512476 RHBDL3P58872 404 aa8.32□□□□□ -1.08
TRAPPC11-209ENST00000512476 PDIA6Q15084 440 aa8.32□□□□□ -1.08
TRAPPC11-209ENST00000512476 LIMD1Q9UGP4 676 aa8.32□□□□□ -1.08
TRAPPC11-209ENST00000512476 PCDHB8Q9UN66 801 aa8.32□□□□□ -1.08
TRAPPC11-209ENST00000512476 PCDHB13Q9Y5F0 798 aa8.32□□□□□ -1.08
TRAPPC11-209ENST00000512476 MNX1P50219 401 aaPredicted RBP8.31□□□□□ -1.08
TRAPPC11-209ENST00000512476 C4orf46Q504U0 113 aa8.31□□□□□ -1.08
TRAPPC11-209ENST00000512476 VAC14Q08AM6 782 aa8.31□□□□□ -1.08
TRAPPC11-209ENST00000512476 COL4A3BPQ9Y5P4 624 aa8.31□□□□□ -1.08
TRAPPC11-209ENST00000512476 WDHD1O75717 1129 aaPredicted RBP8.3□□□□□ -1.08
TRAPPC11-209ENST00000512476 CLK2P49760 499 aaKnown RBP8.3□□□□□ -1.08
TRAPPC11-209ENST00000512476 GYS2P54840 703 aa8.3□□□□□ -1.08
TRAPPC11-209ENST00000512476 BICRAQ9NZM4 1560 aa8.3□□□□□ -1.08
TRAPPC11-209ENST00000512476 MYBPC2Q14324 1141 aa8.3□□□□□ -1.08
TRAPPC11-209ENST00000512476 EFCAB3Q8N7B9 438 aa8.3□□□□□ -1.08
TRAPPC11-209ENST00000512476 RPS6KC1Q96S38 1066 aa8.3□□□□□ -1.08
TRAPPC11-209ENST00000512476 TMX4Q9H1E5 349 aaPredicted RBP8.3□□□□□ -1.08
TRAPPC11-209ENST00000512476 BIN2Q9UBW5 565 aaPredicted RBP8.3□□□□□ -1.08
TRAPPC11-209ENST00000512476 CLSPNQ9HAW4 1339 aa8.29□□□□□ -1.08
TRAPPC11-209ENST00000512476 ABCB7O75027 752 aa8.29□□□□□ -1.08
TRAPPC11-209ENST00000512476 FMNL3Q8IVF7 1028 aa8.29□□□□□ -1.08
TRAPPC11-209ENST00000512476 PRIM1P49642 420 aaKnown RBP8.29□□□□□ -1.08
TRAPPC11-209ENST00000512476 HIC1Q14526 733 aa8.29□□□□□ -1.08
TRAPPC11-209ENST00000512476 HSP90AB2PQ58FF8 381 aa8.29□□□□□ -1.08
TRAPPC11-209ENST00000512476 RINLQ6ZS11 566 aa8.29□□□□□ -1.08
TRAPPC11-209ENST00000512476 NT5DC4Q86YG4 428 aa8.29□□□□□ -1.08
TRAPPC11-209ENST00000512476 PCDH12Q9NPG4 1184 aa8.29□□□□□ -1.08
TRAPPC11-209ENST00000512476 CUEDC1Q9NWM3 386 aaPredicted RBP8.29□□□□□ -1.08
TRAPPC11-209ENST00000512476 IFT57Q9NWB7 429 aa8.28□□□□□ -1.08
TRAPPC11-209ENST00000512476 PTMAP06454 111 aaKnown RBP8.27□□□□□ -1.09
TRAPPC11-209ENST00000512476 ARID4AP29374 1257 aaPredicted RBP8.27□□□□□ -1.09
TRAPPC11-209ENST00000512476 BIRC2Q13490 618 aa8.27□□□□□ -1.09
TRAPPC11-209ENST00000512476 MAFBQ9Y5Q3 323 aaPredicted RBP8.27□□□□□ -1.09
TRAPPC11-209ENST00000512476 METTL16Q86W50 562 aaKnown RBP8.27□□□□□ -1.09
TRAPPC11-209ENST00000512476 FAM161BQ96MY7 647 aa8.27□□□□□ -1.09
TRAPPC11-209ENST00000512476 LMOD3Q0VAK6 560 aa8.26□□□□□ -1.09
TRAPPC11-209ENST00000512476 RAVER1Q8IY67 606 aaKnown RBP8.26□□□□□ -1.09
TRAPPC11-209ENST00000512476 PPP4CP60510 307 aa8.26□□□□□ -1.09
TRAPPC11-209ENST00000512476 EIF3JO75822 258 aaKnown RBP8.25□□□□□ -1.09
TRAPPC11-209ENST00000512476 SSFA2P28290 1259 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms